Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 U1.36-201ENST00000620684 176 ntBASIC2.32□□□□□ -2.04
CLDND1Q9NY35 ICE2P2-201ENST00000483823 2787 ntBASIC2.32□□□□□ -2.04
CLDND1Q9NY35 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLDND1Q9NY35 AL442644.1-201ENST00000454390 3105 ntBASIC2.31□□□□□ -2.04
CLDND1Q9NY35 RNU6-833P-201ENST00000363486 107 ntBASIC2.31□□□□□ -2.04
CLDND1Q9NY35 RNU6-215P-201ENST00000365169 102 ntBASIC2.31□□□□□ -2.04
CLDND1Q9NY35 RNU6-1189P-201ENST00000383958 107 ntBASIC2.31□□□□□ -2.04
CLDND1Q9NY35 RNU6-938P-201ENST00000411285 103 ntBASIC2.31□□□□□ -2.04
CLDND1Q9NY35 SNORD36C-201ENST00000516733 66 ntBASIC2.31□□□□□ -2.04
CLDND1Q9NY35 MIR4529-201ENST00000578110 78 ntBASIC2.31□□□□□ -2.04
CLDND1Q9NY35 MIR6766-201ENST00000622641 72 ntBASIC2.31□□□□□ -2.04
CLDND1Q9NY35 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.31□□□□□ -2.04
CLDND1Q9NY35 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLDND1Q9NY35 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLDND1Q9NY35 MIR6073-201ENST00000352083 89 ntBASIC2.3□□□□□ -2.04
CLDND1Q9NY35 SNORD38C-201ENST00000384381 69 ntBASIC2.3□□□□□ -2.04
CLDND1Q9NY35 SNORA40.5-201ENST00000391061 128 ntBASIC2.3□□□□□ -2.04
CLDND1Q9NY35 AL021397.1-201ENST00000451806 248 ntBASIC2.3□□□□□ -2.04
CLDND1Q9NY35 RNU6-1061P-201ENST00000516530 99 ntBASIC2.3□□□□□ -2.04
CLDND1Q9NY35 RNA5SP481-201ENST00000516814 122 ntBASIC2.3□□□□□ -2.04
CLDND1Q9NY35 AC133485.4-201ENST00000561835 220 ntBASIC2.3□□□□□ -2.04
CLDND1Q9NY35 AC138907.4-201ENST00000570107 226 ntBASIC2.3□□□□□ -2.04
CLDND1Q9NY35 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.3□□□□□ -2.04
CLDND1Q9NY35 Y_RNA.81-201ENST00000362997 102 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 SNORD58C-201ENST00000365223 64 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 MIR583-201ENST00000384846 75 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 RNA5SP100-201ENST00000410903 110 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 RNA5SP59-201ENST00000410922 110 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 Y_RNA.630-201ENST00000411370 108 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 SUMO1P4-201ENST00000429430 302 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 RNU6-830P-201ENST00000516353 107 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 MIR4709-201ENST00000577272 72 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 MIR5194-201ENST00000582634 120 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.29□□□□□ -2.04
CLDND1Q9NY35 AC108081.1-201ENST00000604358 221 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 AC021506.2-201ENST00000612354 169 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 AC245884.12-201ENST00000615364 59 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 AC010297.1-201ENST00000623948 149 ntBASIC2.29□□□□□ -2.04
CLDND1Q9NY35 SNORA2.2-201ENST00000365473 135 ntBASIC2.28□□□□□ -2.04
CLDND1Q9NY35 RNU6-1056P-201ENST00000383996 107 ntBASIC2.28□□□□□ -2.04
CLDND1Q9NY35 AC015922.2-201ENST00000435593 184 ntBASIC2.28□□□□□ -2.04
CLDND1Q9NY35 AC087499.4-201ENST00000448505 178 ntBASIC2.28□□□□□ -2.04
CLDND1Q9NY35 snoU13.27-201ENST00000459278 104 ntBASIC2.28□□□□□ -2.04
CLDND1Q9NY35 RNU7-34P-201ENST00000459394 64 ntBASIC2.28□□□□□ -2.04
CLDND1Q9NY35 RNU7-12P-201ENST00000516030 62 ntBASIC2.28□□□□□ -2.04
CLDND1Q9NY35 RNU6-781P-201ENST00000516377 101 ntBASIC2.28□□□□□ -2.04
CLDND1Q9NY35 RNU6-113P-201ENST00000516653 101 ntBASIC2.28□□□□□ -2.04
CLDND1Q9NY35 AP003484.1-201ENST00000530974 250 ntBASIC2.28□□□□□ -2.04
CLDND1Q9NY35 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDND1Q9NY35 U6.95-201ENST00000636931 70 ntBASIC2.28□□□□□ -2.04
CLDND1Q9NY35 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLDND1Q9NY35 AC080100.1-201ENST00000624239 5356 ntBASIC2.27□□□□□ -2.05
CLDND1Q9NY35 MIR21-201ENST00000362134 72 ntBASIC2.27□□□□□ -2.05
CLDND1Q9NY35 Y_RNA.440-201ENST00000384120 114 ntBASIC2.27□□□□□ -2.05
CLDND1Q9NY35 Y_RNA.508-201ENST00000384502 114 ntBASIC2.27□□□□□ -2.05
CLDND1Q9NY35 RNA5SP181-201ENST00000410246 98 ntBASIC2.27□□□□□ -2.05
CLDND1Q9NY35 RNU6-1064P-201ENST00000410626 104 ntBASIC2.27□□□□□ -2.05
CLDND1Q9NY35 AC108667.1-201ENST00000428618 249 ntBASIC2.27□□□□□ -2.05
CLDND1Q9NY35 AC099513.1-201ENST00000490423 301 ntBASIC2.27□□□□□ -2.05
CLDND1Q9NY35 RN7SKP19-201ENST00000516016 252 ntBASIC2.27□□□□□ -2.05
CLDND1Q9NY35 RNA5SP200-201ENST00000516360 103 ntBASIC2.27□□□□□ -2.05
CLDND1Q9NY35 IGKV1-22-201ENST00000524313 326 ntBASIC2.27□□□□□ -2.05
CLDND1Q9NY35 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLDND1Q9NY35 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.26□□□□□ -2.05
CLDND1Q9NY35 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CLDND1Q9NY35 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CLDND1Q9NY35 RNU6-1325P-201ENST00000364905 105 ntBASIC2.26□□□□□ -2.05
CLDND1Q9NY35 RNU6-476P-201ENST00000384726 107 ntBASIC2.26□□□□□ -2.05
CLDND1Q9NY35 MIRLET7F2-201ENST00000385277 83 ntBASIC2.26□□□□□ -2.05
CLDND1Q9NY35 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.26□□□□□ -2.05
CLDND1Q9NY35 RNU2-19P-201ENST00000517288 84 ntBASIC2.26□□□□□ -2.05
CLDND1Q9NY35 AL513423.1-201ENST00000621695 132 ntBASIC2.26□□□□□ -2.05
CLDND1Q9NY35 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
CLDND1Q9NY35 MIR337-201ENST00000362281 93 ntBASIC2.25□□□□□ -2.05
CLDND1Q9NY35 RNA5SP393-201ENST00000363423 117 ntBASIC2.25□□□□□ -2.05
CLDND1Q9NY35 SNORA67.1-201ENST00000364749 141 ntBASIC2.25□□□□□ -2.05
CLDND1Q9NY35 RNU6-1144P-201ENST00000384247 104 ntBASIC2.25□□□□□ -2.05
CLDND1Q9NY35 AC019129.1-201ENST00000403786 261 ntBASIC2.25□□□□□ -2.05
CLDND1Q9NY35 RNU6-919P-201ENST00000516731 104 ntBASIC2.25□□□□□ -2.05
CLDND1Q9NY35 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.25□□□□□ -2.05
CLDND1Q9NY35 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CLDND1Q9NY35 MIR524-201ENST00000385242 87 ntBASIC2.24□□□□□ -2.05
CLDND1Q9NY35 HMGN2P35-201ENST00000412164 270 ntBASIC2.24□□□□□ -2.05
CLDND1Q9NY35 AC055731.1-201ENST00000474387 401 ntBASIC2.24□□□□□ -2.05
CLDND1Q9NY35 RPS26P48-201ENST00000491713 339 ntBASIC2.24□□□□□ -2.05
CLDND1Q9NY35 SNORD33.1-201ENST00000516213 88 ntBASIC2.24□□□□□ -2.05
CLDND1Q9NY35 SNORA31.17-201ENST00000516953 127 ntBASIC2.24□□□□□ -2.05
CLDND1Q9NY35 MIR4446-201ENST00000578505 67 ntBASIC2.24□□□□□ -2.05
CLDND1Q9NY35 AC002984.1-201ENST00000591692 448 ntBASIC2.24□□□□□ -2.05
CLDND1Q9NY35 AC009831.4-201ENST00000620744 325 ntBASIC2.24□□□□□ -2.05
CLDND1Q9NY35 RNU6-429P-201ENST00000384582 108 ntBASIC2.23□□□□□ -2.05
CLDND1Q9NY35 MIR452-201ENST00000385020 85 ntBASIC2.23□□□□□ -2.05
CLDND1Q9NY35 MIR660-201ENST00000385235 97 ntBASIC2.23□□□□□ -2.05
CLDND1Q9NY35 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDND1Q9NY35 AL035461.1-201ENST00000421490 332 ntBASIC2.23□□□□□ -2.05
CLDND1Q9NY35 AC093850.1-201ENST00000454121 251 ntBASIC2.23□□□□□ -2.05
CLDND1Q9NY35 SNORA18.7-201ENST00000516910 131 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms