Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
LIN7CQ9NUP9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.44□□□□□ -2.18
LIN7CQ9NUP9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
LIN7CQ9NUP9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
LIN7CQ9NUP9 Y_RNA.370-201ENST00000365589 108 ntBASIC1.43□□□□□ -2.18
LIN7CQ9NUP9 RNU6-643P-201ENST00000384018 107 ntBASIC1.43□□□□□ -2.18
LIN7CQ9NUP9 MIR570-201ENST00000384917 97 ntBASIC1.43□□□□□ -2.18
LIN7CQ9NUP9 SNORA40.18-201ENST00000391200 128 ntBASIC1.43□□□□□ -2.18
LIN7CQ9NUP9 SNORA26.9-201ENST00000391322 122 ntBASIC1.43□□□□□ -2.18
LIN7CQ9NUP9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.43□□□□□ -2.18
LIN7CQ9NUP9 RNU7-41P-201ENST00000515917 61 ntBASIC1.43□□□□□ -2.18
LIN7CQ9NUP9 Y_RNA.700-201ENST00000516806 100 ntBASIC1.43□□□□□ -2.18
LIN7CQ9NUP9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
LIN7CQ9NUP9 MIR6845-201ENST00000613182 61 ntBASIC1.43□□□□□ -2.18
LIN7CQ9NUP9 MIR8065-201ENST00000620577 100 ntBASIC1.43□□□□□ -2.18
LIN7CQ9NUP9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.43□□□□□ -2.18
LIN7CQ9NUP9 Y_RNA.37-201ENST00000362606 108 ntBASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 SNORD48-201ENST00000364953 64 ntBASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 SNORA1.2-201ENST00000365189 134 ntBASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 SNORA1-201ENST00000384107 130 ntBASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 MIR504-201ENST00000385065 83 ntBASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 MIR9-3-201ENST00000385084 90 ntBASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 MIR1289-2-201ENST00000408360 111 ntBASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 AF228730.3-201ENST00000436691 102 ntBASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 RNU6-794P-201ENST00000517261 64 ntBASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 MIR378D2-201ENST00000580636 98 ntBASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 AC004792.1-201ENST00000614523 137 ntBASIC1.42□□□□□ -2.18
LIN7CQ9NUP9 Y_RNA.241-201ENST00000364470 117 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 RNU6-312P-201ENST00000364629 107 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 Y_RNA.785-201ENST00000384290 109 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 RNU6-938P-201ENST00000411285 103 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 AC006461.1-201ENST00000412637 326 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 AC003989.2-201ENST00000440224 169 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 AC087499.4-201ENST00000448505 178 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 RNU7-120P-201ENST00000459334 63 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 AC048334.1-201ENST00000477975 159 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 RNU6-861P-201ENST00000516745 106 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 MIR4431-201ENST00000579990 94 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 AC134878.1-201ENST00000619901 243 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 AC084768.2-201ENST00000622736 221 ntBASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LIN7CQ9NUP9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LIN7CQ9NUP9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
LIN7CQ9NUP9 snoU13.25-201ENST00000458945 104 ntBASIC1.4□□□□□ -2.19
LIN7CQ9NUP9 SNORD116-25-201ENST00000516517 92 ntBASIC1.4□□□□□ -2.19
LIN7CQ9NUP9 SNORD36C-201ENST00000516733 66 ntBASIC1.4□□□□□ -2.19
LIN7CQ9NUP9 AP003484.1-201ENST00000530974 250 ntBASIC1.4□□□□□ -2.19
LIN7CQ9NUP9 MIR3129-201ENST00000581095 76 ntBASIC1.4□□□□□ -2.19
LIN7CQ9NUP9 AC008133.2-201ENST00000624540 351 ntBASIC1.4□□□□□ -2.19
LIN7CQ9NUP9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.4□□□□□ -2.19
LIN7CQ9NUP9 RNU6-978P-201ENST00000364371 103 ntBASIC1.39□□□□□ -2.19
LIN7CQ9NUP9 Y_RNA.494-201ENST00000384432 111 ntBASIC1.39□□□□□ -2.19
LIN7CQ9NUP9 RNU6-1067P-201ENST00000384752 107 ntBASIC1.39□□□□□ -2.19
LIN7CQ9NUP9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.39□□□□□ -2.19
LIN7CQ9NUP9 AC108059.2-201ENST00000434626 151 ntBASIC1.39□□□□□ -2.19
LIN7CQ9NUP9 SEPT7P4-201ENST00000437076 306 ntBASIC1.39□□□□□ -2.19
LIN7CQ9NUP9 RPS29P11-201ENST00000496507 171 ntBASIC1.39□□□□□ -2.19
LIN7CQ9NUP9 SNORA31.2-201ENST00000516019 134 ntBASIC1.39□□□□□ -2.19
LIN7CQ9NUP9 AP000648.3-201ENST00000623539 4507 ntBASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 RNU6-682P-201ENST00000363843 106 ntBASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 AC107297.1-201ENST00000459991 176 ntBASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 RPS26P48-201ENST00000491713 339 ntBASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 AL133373.1-201ENST00000497098 94 ntBASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 RNU6-182P-201ENST00000516970 105 ntBASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 MIR4255-201ENST00000579351 72 ntBASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 MIR502-201ENST00000606349 86 ntBASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 MIR4791-201ENST00000607666 84 ntBASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.38□□□□□ -2.19
LIN7CQ9NUP9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-34-201ENST00000362441 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-12-201ENST00000362583 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-29-201ENST00000362834 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-9-201ENST00000362912 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-21-201ENST00000362963 81 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-14-201ENST00000363090 81 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORA25.3-201ENST00000363205 127 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-13-201ENST00000363358 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-41-201ENST00000363608 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-11-201ENST00000363616 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-5-201ENST00000363633 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-39-201ENST00000363694 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-4-201ENST00000363810 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-16-201ENST00000363887 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-6-201ENST00000363942 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-42-201ENST00000364273 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-15-201ENST00000364809 81 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-1-201ENST00000364961 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-26-201ENST00000365067 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 RNA5SP363-201ENST00000365072 115 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-10-201ENST00000365073 81 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-43-201ENST00000365503 82 ntBASIC1.37□□□□□ -2.19
LIN7CQ9NUP9 SNORD115-36-201ENST00000365629 82 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms