Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 Y_RNA.547-201ENST00000384654 119 ntBASIC0.88□□□□□ -2.27
BLOC1S4Q9NUP1 MIR570-201ENST00000384917 97 ntBASIC0.88□□□□□ -2.27
BLOC1S4Q9NUP1 AL731563.1-201ENST00000442202 214 ntBASIC0.88□□□□□ -2.27
BLOC1S4Q9NUP1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.88□□□□□ -2.27
BLOC1S4Q9NUP1 MIR4680-201ENST00000580906 66 ntBASIC0.88□□□□□ -2.27
BLOC1S4Q9NUP1 AL049861.1-201ENST00000603130 150 ntBASIC0.88□□□□□ -2.27
BLOC1S4Q9NUP1 AP000753.3-201ENST00000604083 169 ntBASIC0.88□□□□□ -2.27
BLOC1S4Q9NUP1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.88□□□□□ -2.27
BLOC1S4Q9NUP1 MTND1P7-201ENST00000632801 297 ntBASIC0.88□□□□□ -2.27
BLOC1S4Q9NUP1 UBE2WP1-201ENST00000362030 340 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-34-201ENST00000362441 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-12-201ENST00000362583 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-29-201ENST00000362834 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-9-201ENST00000362912 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-21-201ENST00000362963 81 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-14-201ENST00000363090 81 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-13-201ENST00000363358 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-41-201ENST00000363608 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-11-201ENST00000363616 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-5-201ENST00000363633 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-39-201ENST00000363694 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-4-201ENST00000363810 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-16-201ENST00000363887 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-6-201ENST00000363942 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 Y_RNA.217-201ENST00000364214 105 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-42-201ENST00000364273 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-15-201ENST00000364809 81 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-1-201ENST00000364961 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-26-201ENST00000365067 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-10-201ENST00000365073 81 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-43-201ENST00000365503 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-36-201ENST00000365629 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 AL035398.1-201ENST00000430869 322 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 snoU13.16-201ENST00000459350 104 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 Y_RNA.641-201ENST00000459414 105 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD77.4-201ENST00000516158 81 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 RNU7-25P-201ENST00000516544 62 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-40-201ENST00000606510 82 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 RNU6-94P-201ENST00000607728 107 ntBASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
BLOC1S4Q9NUP1 HSBP1P2-201ENST00000299671 229 ntBASIC0.86□□□□□ -2.27
BLOC1S4Q9NUP1 RNU6-662P-201ENST00000384253 104 ntBASIC0.86□□□□□ -2.27
BLOC1S4Q9NUP1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.86□□□□□ -2.27
BLOC1S4Q9NUP1 AC006006.1-201ENST00000603082 144 ntBASIC0.86□□□□□ -2.27
BLOC1S4Q9NUP1 7SK.10-201ENST00000621414 298 ntBASIC0.86□□□□□ -2.27
BLOC1S4Q9NUP1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.86□□□□□ -2.27
BLOC1S4Q9NUP1 MIR1-1-201ENST00000362147 71 ntBASIC0.85□□□□□ -2.27
BLOC1S4Q9NUP1 RNU6-654P-201ENST00000364373 107 ntBASIC0.85□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD114-22-201ENST00000365423 72 ntBASIC0.85□□□□□ -2.27
BLOC1S4Q9NUP1 SNORA26-201ENST00000391286 122 ntBASIC0.85□□□□□ -2.27
BLOC1S4Q9NUP1 RPL21P38-201ENST00000418090 167 ntBASIC0.85□□□□□ -2.27
BLOC1S4Q9NUP1 SERF1AP1-201ENST00000514575 187 ntBASIC0.85□□□□□ -2.27
BLOC1S4Q9NUP1 DEFB108E-201ENST00000524692 240 ntBASIC0.85□□□□□ -2.27
BLOC1S4Q9NUP1 AC020661.2-201ENST00000560114 134 ntBASIC0.85□□□□□ -2.27
BLOC1S4Q9NUP1 MIR548AO-201ENST00000579992 96 ntBASIC0.85□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD115-28-201ENST00000363931 81 ntBASIC0.84□□□□□ -2.27
BLOC1S4Q9NUP1 Y_RNA.241-201ENST00000364470 117 ntBASIC0.84□□□□□ -2.27
BLOC1S4Q9NUP1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
BLOC1S4Q9NUP1 RNU6-639P-201ENST00000384074 107 ntBASIC0.84□□□□□ -2.27
BLOC1S4Q9NUP1 SNORA8.3-201ENST00000384679 139 ntBASIC0.84□□□□□ -2.27
BLOC1S4Q9NUP1 MIR215-201ENST00000384858 110 ntBASIC0.84□□□□□ -2.27
BLOC1S4Q9NUP1 MIR520E-201ENST00000384867 87 ntBASIC0.84□□□□□ -2.27
BLOC1S4Q9NUP1 MIR1827-201ENST00000408549 66 ntBASIC0.84□□□□□ -2.27
BLOC1S4Q9NUP1 MTCO2P24-201ENST00000515611 426 ntBASIC0.84□□□□□ -2.27
BLOC1S4Q9NUP1 MIR4264-201ENST00000583520 66 ntBASIC0.84□□□□□ -2.27
BLOC1S4Q9NUP1 AC012433.1-201ENST00000588916 398 ntBASIC0.84□□□□□ -2.27
BLOC1S4Q9NUP1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.83□□□□□ -2.28
BLOC1S4Q9NUP1 SNORD24-201ENST00000383884 75 ntBASIC0.83□□□□□ -2.28
BLOC1S4Q9NUP1 SNORA24-201ENST00000384096 131 ntBASIC0.83□□□□□ -2.28
BLOC1S4Q9NUP1 Y_RNA.604-201ENST00000410574 102 ntBASIC0.83□□□□□ -2.28
BLOC1S4Q9NUP1 AC006461.1-201ENST00000412637 326 ntBASIC0.83□□□□□ -2.28
BLOC1S4Q9NUP1 AC044792.1-201ENST00000593294 196 ntBASIC0.83□□□□□ -2.28
BLOC1S4Q9NUP1 AL356055.1-201ENST00000602528 446 ntBASIC0.83□□□□□ -2.28
BLOC1S4Q9NUP1 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
BLOC1S4Q9NUP1 MIR6504-201ENST00000613520 61 ntBASIC0.83□□□□□ -2.28
BLOC1S4Q9NUP1 snoU18.1-201ENST00000629629 71 ntBASIC0.83□□□□□ -2.28
BLOC1S4Q9NUP1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
BLOC1S4Q9NUP1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
BLOC1S4Q9NUP1 Y_RNA.84-201ENST00000363011 104 ntBASIC0.82□□□□□ -2.28
BLOC1S4Q9NUP1 Y_RNA.191-201ENST00000363972 113 ntBASIC0.82□□□□□ -2.28
BLOC1S4Q9NUP1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.82□□□□□ -2.28
BLOC1S4Q9NUP1 SNORD99-201ENST00000408612 74 ntBASIC0.82□□□□□ -2.28
BLOC1S4Q9NUP1 RNU6-985P-201ENST00000410182 104 ntBASIC0.82□□□□□ -2.28
BLOC1S4Q9NUP1 AC004941.2-201ENST00000427009 228 ntBASIC0.82□□□□□ -2.28
BLOC1S4Q9NUP1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.82□□□□□ -2.28
BLOC1S4Q9NUP1 RNU7-67P-201ENST00000459003 62 ntBASIC0.82□□□□□ -2.28
BLOC1S4Q9NUP1 RNU6-365P-201ENST00000517113 106 ntBASIC0.82□□□□□ -2.28
BLOC1S4Q9NUP1 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
BLOC1S4Q9NUP1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.82□□□□□ -2.28
BLOC1S4Q9NUP1 AC068700.1-201ENST00000565862 3754 ntBASIC0.81□□□□□ -2.28
BLOC1S4Q9NUP1 Y_RNA.64-201ENST00000362845 102 ntBASIC0.81□□□□□ -2.28
BLOC1S4Q9NUP1 Y_RNA.238-201ENST00000364441 102 ntBASIC0.81□□□□□ -2.28
BLOC1S4Q9NUP1 SNORA63C-201ENST00000364578 129 ntBASIC0.81□□□□□ -2.28
BLOC1S4Q9NUP1 MIR499A-201ENST00000384903 122 ntBASIC0.81□□□□□ -2.28
BLOC1S4Q9NUP1 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
BLOC1S4Q9NUP1 SNORA40.5-201ENST00000391061 128 ntBASIC0.81□□□□□ -2.28
BLOC1S4Q9NUP1 Y_RNA.666-201ENST00000516187 112 ntBASIC0.81□□□□□ -2.28
BLOC1S4Q9NUP1 RNU6-1338P-201ENST00000516328 91 ntBASIC0.81□□□□□ -2.28
BLOC1S4Q9NUP1 RNU7-53P-201ENST00000516705 60 ntBASIC0.81□□□□□ -2.28
BLOC1S4Q9NUP1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 234.1 ms