Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC106754.2-201ENST00000623006 233 ntBASIC1.93□□□□□ -2.1
CCM2LQ9NUG4 AC021753.1-201ENST00000635724 168 ntBASIC1.93□□□□□ -2.1
CCM2LQ9NUG4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
CCM2LQ9NUG4 RNU1-17P-201ENST00000363022 152 ntBASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 SNORD115-28-201ENST00000363931 81 ntBASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 Y_RNA.398-201ENST00000383952 99 ntBASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 SNORD37.2-201ENST00000391075 66 ntBASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 AL445646.1-201ENST00000431784 216 ntBASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 AC134878.1-201ENST00000619901 243 ntBASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 Y_RNA.778-201ENST00000620203 90 ntBASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 MIR8063-201ENST00000621930 81 ntBASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CCM2LQ9NUG4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 Y_RNA.170-201ENST00000363746 110 ntBASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 RNU6-1130P-201ENST00000365434 107 ntBASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 SNORA26.9-201ENST00000391322 122 ntBASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 AC005908.1-201ENST00000468701 347 ntBASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 AC092991.1-201ENST00000477176 376 ntBASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 AC090049.2-201ENST00000550377 109 ntBASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 MIR4498-201ENST00000577599 66 ntBASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 MIR4781-201ENST00000585250 76 ntBASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 FAM106DP-201ENST00000586416 501 ntBASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 MIR6844-201ENST00000637122 62 ntBASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 WWP1P1-201ENST00000466609 2769 ntBASIC1.91□□□□□ -2.1
CCM2LQ9NUG4 SNORD33-201ENST00000362761 85 ntBASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 RNU6-774P-201ENST00000363238 107 ntBASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 U8.13-201ENST00000390842 128 ntBASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 RNA5SP127-201ENST00000411051 133 ntBASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 SUMO1P3-201ENST00000439961 304 ntBASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 AC087499.4-201ENST00000448505 178 ntBASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 HSPE1P24-201ENST00000450782 238 ntBASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 AC008834.1-201ENST00000511612 175 ntBASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 RNU6-917P-201ENST00000516294 104 ntBASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 RNU6-255P-201ENST00000516957 105 ntBASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 MIR3658-201ENST00000636291 56 ntBASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.9□□□□□ -2.11
CCM2LQ9NUG4 RNU6-151P-201ENST00000364158 107 ntBASIC1.89□□□□□ -2.11
CCM2LQ9NUG4 RNU6-1292P-201ENST00000383856 107 ntBASIC1.89□□□□□ -2.11
CCM2LQ9NUG4 Y_RNA.410-201ENST00000383992 113 ntBASIC1.89□□□□□ -2.11
CCM2LQ9NUG4 MIR653-201ENST00000385279 96 ntBASIC1.89□□□□□ -2.11
CCM2LQ9NUG4 AL451046.2-201ENST00000403074 277 ntBASIC1.89□□□□□ -2.11
CCM2LQ9NUG4 RNU4-57P-201ENST00000515980 135 ntBASIC1.89□□□□□ -2.11
CCM2LQ9NUG4 SNORA18.4-201ENST00000516440 124 ntBASIC1.89□□□□□ -2.11
CCM2LQ9NUG4 MTND5P41-201ENST00000517498 206 ntBASIC1.89□□□□□ -2.11
CCM2LQ9NUG4 MIR3129-201ENST00000581095 76 ntBASIC1.89□□□□□ -2.11
CCM2LQ9NUG4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCM2LQ9NUG4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
CCM2LQ9NUG4 Y_RNA.37-201ENST00000362606 108 ntBASIC1.88□□□□□ -2.11
CCM2LQ9NUG4 SNORA1.2-201ENST00000365189 134 ntBASIC1.88□□□□□ -2.11
CCM2LQ9NUG4 RNU4-11P-201ENST00000365287 132 ntBASIC1.88□□□□□ -2.11
CCM2LQ9NUG4 RNY1P5-201ENST00000383890 115 ntBASIC1.88□□□□□ -2.11
CCM2LQ9NUG4 SNORA1-201ENST00000384107 130 ntBASIC1.88□□□□□ -2.11
CCM2LQ9NUG4 MIR624-201ENST00000385217 97 ntBASIC1.88□□□□□ -2.11
CCM2LQ9NUG4 CYCSP49-201ENST00000420810 319 ntBASIC1.88□□□□□ -2.11
CCM2LQ9NUG4 RNU7-200P-201ENST00000516105 62 ntBASIC1.88□□□□□ -2.11
CCM2LQ9NUG4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCM2LQ9NUG4 MIR302D-201ENST00000362275 68 ntBASIC1.87□□□□□ -2.11
CCM2LQ9NUG4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.87□□□□□ -2.11
CCM2LQ9NUG4 RNU6-818P-201ENST00000364837 108 ntBASIC1.87□□□□□ -2.11
CCM2LQ9NUG4 Y_RNA.400-201ENST00000383963 111 ntBASIC1.87□□□□□ -2.11
CCM2LQ9NUG4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.87□□□□□ -2.11
CCM2LQ9NUG4 MIR5089-201ENST00000580047 84 ntBASIC1.87□□□□□ -2.11
CCM2LQ9NUG4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.87□□□□□ -2.11
CCM2LQ9NUG4 AL513534.2-201ENST00000603836 250 ntBASIC1.87□□□□□ -2.11
CCM2LQ9NUG4 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
CCM2LQ9NUG4 AL365434.2-201ENST00000607979 234 ntBASIC1.87□□□□□ -2.11
CCM2LQ9NUG4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CCM2LQ9NUG4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 RNU6-1189P-201ENST00000383958 107 ntBASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 U8.17-201ENST00000391292 132 ntBASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 AF228730.3-201ENST00000436691 102 ntBASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 SNORD123-201ENST00000459473 70 ntBASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 AC079140.2-201ENST00000506193 142 ntBASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 Y_RNA.703-201ENST00000516846 111 ntBASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 SNORA18.7-201ENST00000516910 131 ntBASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 AP003484.1-201ENST00000530974 250 ntBASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 AC112693.2-201ENST00000556538 232 ntBASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 MIR6845-201ENST00000613182 61 ntBASIC1.86□□□□□ -2.11
CCM2LQ9NUG4 AC092881.1-201ENST00000638218 2733 ntBASIC1.85□□□□□ -2.11
CCM2LQ9NUG4 MIR583-201ENST00000384846 75 ntBASIC1.85□□□□□ -2.11
CCM2LQ9NUG4 SNORD77.3-201ENST00000391113 65 ntBASIC1.85□□□□□ -2.11
CCM2LQ9NUG4 MIR513C-201ENST00000401352 84 ntBASIC1.85□□□□□ -2.11
CCM2LQ9NUG4 SNX2P2-201ENST00000424553 323 ntBASIC1.85□□□□□ -2.11
CCM2LQ9NUG4 AC108667.1-201ENST00000428618 249 ntBASIC1.85□□□□□ -2.11
CCM2LQ9NUG4 SNORA74.3-201ENST00000517108 154 ntBASIC1.85□□□□□ -2.11
CCM2LQ9NUG4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.85□□□□□ -2.11
CCM2LQ9NUG4 MIR5197-201ENST00000583721 112 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 250.7 ms