Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 SNORD115-29-201ENST00000362834 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-9-201ENST00000362912 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-21-201ENST00000362963 81 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-14-201ENST00000363090 81 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-13-201ENST00000363358 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-41-201ENST00000363608 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-11-201ENST00000363616 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-5-201ENST00000363633 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-39-201ENST00000363694 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-4-201ENST00000363810 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-16-201ENST00000363887 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 RNU6-770P-201ENST00000363929 105 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-6-201ENST00000363942 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-42-201ENST00000364273 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-15-201ENST00000364809 81 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-1-201ENST00000364961 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-26-201ENST00000365067 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-10-201ENST00000365073 81 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-43-201ENST00000365503 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-36-201ENST00000365629 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 MIR520E-201ENST00000384867 87 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORA53-201ENST00000391141 249 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 MTND4LP11-201ENST00000422184 280 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 ELOCP20-201ENST00000422460 345 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 AC091959.1-201ENST00000495857 238 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD77.4-201ENST00000516158 81 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.666-201ENST00000516187 112 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 CYP3A137P-201ENST00000562436 69 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 AC011195.1-201ENST00000578177 177 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-40-201ENST00000606510 82 ntBASIC0.58□□□□□ -2.32
ZCCHC3Q9NUD5 SNORA25.1-201ENST00000362326 128 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.128-201ENST00000363391 112 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.214-201ENST00000364201 112 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.276-201ENST00000364732 109 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.394-201ENST00000383942 103 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.494-201ENST00000384432 111 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 RNU6-205P-201ENST00000390858 107 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 AC007751.1-201ENST00000529260 376 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 AC004817.2-201ENST00000561794 651 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 MIR4662B-201ENST00000579498 81 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 AC037487.3-201ENST00000606668 112 ntBASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.57□□□□□ -2.32
ZCCHC3Q9NUD5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.217-201ENST00000364214 105 ntBASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD114-22-201ENST00000365423 72 ntBASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 RNU6-514P-201ENST00000384208 107 ntBASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 RNU6-662P-201ENST00000384253 104 ntBASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.460-201ENST00000384255 102 ntBASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 MIR215-201ENST00000384858 110 ntBASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 AC090844.1-201ENST00000422019 156 ntBASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 BTF3P11-201ENST00000426582 477 ntBASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 AC087499.4-201ENST00000448505 178 ntBASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 snoU13.21-201ENST00000459368 105 ntBASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.641-201ENST00000459414 105 ntBASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 AL355297.3-201ENST00000604082 446 ntBASIC0.56□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD115-28-201ENST00000363931 81 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.241-201ENST00000364470 117 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.293-201ENST00000364908 93 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 SNORA22B-201ENST00000383876 138 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.486-201ENST00000384398 107 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 MIR526A2-201ENST00000390198 65 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.587-201ENST00000391210 103 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 RNU7-67P-201ENST00000459003 62 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 MTCO2P24-201ENST00000515611 426 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 SNORA27.4-201ENST00000516650 95 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.711-201ENST00000516993 102 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 MIR6504-201ENST00000613520 61 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 MIR8070-201ENST00000616510 88 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 RMST_2.1-201ENST00000617263 136 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 AC134503.1-201ENST00000633048 54 ntBASIC0.55□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.19-201ENST00000362462 99 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.158-201ENST00000363651 101 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 RNU6-934P-201ENST00000365154 107 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.455-201ENST00000384230 98 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 RPL21P38-201ENST00000418090 167 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 RPS29P1-201ENST00000465274 159 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 RNY3P15-201ENST00000516297 97 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 AC131281.1-201ENST00000522984 164 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 AC018659.1-201ENST00000551083 169 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 AC113195.1-201ENST00000579952 141 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 MIR5688-201ENST00000580619 83 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 AP000942.4-201ENST00000604811 241 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 AL008718.3-201ENST00000610217 321 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 AC134878.1-201ENST00000619901 243 ntBASIC0.54□□□□□ -2.32
ZCCHC3Q9NUD5 Y_RNA.4-201ENST00000362333 112 ntBASIC0.53□□□□□ -2.32
ZCCHC3Q9NUD5 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
ZCCHC3Q9NUD5 MIR573-201ENST00000384964 99 ntBASIC0.53□□□□□ -2.32
ZCCHC3Q9NUD5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
ZCCHC3Q9NUD5 RNA5SP222-201ENST00000411039 105 ntBASIC0.53□□□□□ -2.32
ZCCHC3Q9NUD5 RNU6-938P-201ENST00000411285 103 ntBASIC0.53□□□□□ -2.32
ZCCHC3Q9NUD5 SNORD83.1-201ENST00000411362 77 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms