Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RNU7-43P-201ENST00000516554 64 ntBASIC1.25□□□□□ -2.21
SMC4Q9NTJ3 MIR548AR-201ENST00000582191 57 ntBASIC1.25□□□□□ -2.21
SMC4Q9NTJ3 U2.14-201ENST00000615943 113 ntBASIC1.25□□□□□ -2.21
SMC4Q9NTJ3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.25□□□□□ -2.21
SMC4Q9NTJ3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SMC4Q9NTJ3 SNORD114-27-201ENST00000363766 70 ntBASIC1.24□□□□□ -2.21
SMC4Q9NTJ3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.24□□□□□ -2.21
SMC4Q9NTJ3 MTCO2P24-201ENST00000515611 426 ntBASIC1.24□□□□□ -2.21
SMC4Q9NTJ3 MIR4724-201ENST00000579485 89 ntBASIC1.24□□□□□ -2.21
SMC4Q9NTJ3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.24□□□□□ -2.21
SMC4Q9NTJ3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
SMC4Q9NTJ3 RNU6-442P-201ENST00000383968 104 ntBASIC1.23□□□□□ -2.21
SMC4Q9NTJ3 Y_RNA.518-201ENST00000384552 113 ntBASIC1.23□□□□□ -2.21
SMC4Q9NTJ3 MIR570-201ENST00000384917 97 ntBASIC1.23□□□□□ -2.21
SMC4Q9NTJ3 MIR520C-201ENST00000385005 87 ntBASIC1.23□□□□□ -2.21
SMC4Q9NTJ3 SNORD2.1-201ENST00000458762 69 ntBASIC1.23□□□□□ -2.21
SMC4Q9NTJ3 RN7SKP164-201ENST00000516138 266 ntBASIC1.23□□□□□ -2.21
SMC4Q9NTJ3 RNU7-149P-201ENST00000516739 59 ntBASIC1.23□□□□□ -2.21
SMC4Q9NTJ3 MIR4764-201ENST00000580680 88 ntBASIC1.23□□□□□ -2.21
SMC4Q9NTJ3 MIR4719-201ENST00000585233 84 ntBASIC1.23□□□□□ -2.21
SMC4Q9NTJ3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.23□□□□□ -2.21
SMC4Q9NTJ3 uc_338.4-201ENST00000616635 176 ntBASIC1.23□□□□□ -2.21
SMC4Q9NTJ3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 MIR367-201ENST00000362299 68 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 SNORA25.3-201ENST00000363205 127 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 Y_RNA.149-201ENST00000363558 117 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 Y_RNA.242-201ENST00000364473 110 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 Y_RNA.277-201ENST00000364754 102 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 MIR520E-201ENST00000384867 87 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 MIR626-201ENST00000385032 94 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 MIR613-201ENST00000385248 95 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 MT-TT-201ENST00000387460 66 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 MTCYBP9-201ENST00000431021 303 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 AC002429.1-201ENST00000437672 148 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 SNORD127-201ENST00000458892 86 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 RNU7-181P-201ENST00000517234 74 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 AC006441.5-201ENST00000612680 209 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 Y_RNA.802-201ENST00000614892 130 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 AC012676.2-201ENST00000619258 186 ntBASIC1.22□□□□□ -2.21
SMC4Q9NTJ3 Y_RNA.14-201ENST00000362415 103 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.76-201ENST00000362931 109 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 snoU2_19.4-201ENST00000364329 80 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.229-201ENST00000364347 113 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 MIR526A2-201ENST00000390198 65 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 RNU7-21P-201ENST00000459430 62 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 MTND1P19-201ENST00000511780 315 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 SCARNA8-201ENST00000515924 131 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 RNU6-1045P-201ENST00000516321 107 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 AC100767.1-201ENST00000528178 123 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 AP003716.2-201ENST00000528260 108 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 AC006006.1-201ENST00000603082 144 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 AC103810.9-201ENST00000606688 112 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 AC022709.1-201ENST00000615967 87 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 Pinc.1-201ENST00000616452 154 ntBASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SMC4Q9NTJ3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.82-201ENST00000363000 102 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.92-201ENST00000363043 102 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 RNA5SP48-201ENST00000363969 126 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.235-201ENST00000364412 102 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.306-201ENST00000365015 102 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.312-201ENST00000365089 102 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.322-201ENST00000365151 102 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.416-201ENST00000384014 113 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.540-201ENST00000384638 111 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 MIR7-2-201ENST00000384970 110 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 MIR802-201ENST00000390235 94 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 AL118496.2-201ENST00000448300 230 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.650-201ENST00000459002 102 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 RPS29P1-201ENST00000465274 159 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 RNU6-1007P-201ENST00000516586 107 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 RNU6-113P-201ENST00000516653 101 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 RNU6-453P-201ENST00000516819 85 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.777-201ENST00000516982 102 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 MIR4282-201ENST00000583613 67 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.771-201ENST00000598668 102 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 AC015726.2-201ENST00000620112 122 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.789-201ENST00000622480 102 ntBASIC1.2□□□□□ -2.22
SMC4Q9NTJ3 Y_RNA.54-201ENST00000362766 105 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 RNA5SP264-201ENST00000363115 107 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 RNU6-574P-201ENST00000384265 107 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 SNORD38C-201ENST00000384381 69 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 SNORA75.2-201ENST00000391138 150 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 SNORA75.3-201ENST00000391231 150 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 RNA5SP496-201ENST00000391240 109 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 U8.17-201ENST00000391292 132 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 RNU7-90P-201ENST00000459216 62 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 RNU4-57P-201ENST00000515980 135 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 RNU6-830P-201ENST00000516353 107 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 RNU7-25P-201ENST00000516544 62 ntBASIC1.19□□□□□ -2.22
SMC4Q9NTJ3 AC007751.1-201ENST00000529260 376 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms