Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 Y_RNA.242-201ENST00000364473 110 ntBASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 RNU1-36P-201ENST00000365130 165 ntBASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-1227P-201ENST00000383981 107 ntBASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-1289P-201ENST00000384431 106 ntBASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-1067P-201ENST00000384752 107 ntBASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 FABP5P4-201ENST00000437203 171 ntBASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 MIR4698-201ENST00000577795 80 ntBASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 MIR3124-201ENST00000582636 67 ntBASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 AC006006.1-201ENST00000603082 144 ntBASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 AC106800.4-201ENST00000614905 153 ntBASIC0.71□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.24-201ENST00000362508 103 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 RNU1-93P-201ENST00000364704 169 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 SNORA1.2-201ENST00000365189 134 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-211P-201ENST00000384047 107 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.486-201ENST00000384398 107 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 SNORA2B-201ENST00000384583 137 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.537-201ENST00000384626 109 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 SNORD89-201ENST00000390981 114 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.587-201ENST00000391210 103 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 AL035398.1-201ENST00000430869 322 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 MTATP8P1-201ENST00000467115 207 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 RNU11-2P-201ENST00000516898 142 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.802-201ENST00000614892 130 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
EXOSC3Q9NQT5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 UBE2WP1-201ENST00000362030 340 ntBASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 MIR96-201ENST00000362288 78 ntBASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-1138P-201ENST00000365359 106 ntBASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.494-201ENST00000384432 111 ntBASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-994P-201ENST00000410507 111 ntBASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-847P-201ENST00000411115 108 ntBASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 MTCO2P24-201ENST00000515611 426 ntBASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 SNORD77.4-201ENST00000516158 81 ntBASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 AC243994.1-201ENST00000618627 109 ntBASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 7SK.10-201ENST00000621414 298 ntBASIC0.69□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.237-201ENST00000364439 102 ntBASIC0.68□□□□□ -2.3
EXOSC3Q9NQT5 SNORD113.3-201ENST00000364630 78 ntBASIC0.68□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.275-201ENST00000364726 110 ntBASIC0.68□□□□□ -2.3
EXOSC3Q9NQT5 MIR608-201ENST00000384820 100 ntBASIC0.68□□□□□ -2.3
EXOSC3Q9NQT5 MIR526A2-201ENST00000390198 65 ntBASIC0.68□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-1109P-201ENST00000391187 107 ntBASIC0.68□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.638-201ENST00000459374 113 ntBASIC0.68□□□□□ -2.3
EXOSC3Q9NQT5 TRBVB-201ENST00000477100 408 ntBASIC0.68□□□□□ -2.3
EXOSC3Q9NQT5 SCARNA8-201ENST00000515924 131 ntBASIC0.68□□□□□ -2.3
EXOSC3Q9NQT5 MIR2115-201ENST00000516657 100 ntBASIC0.68□□□□□ -2.3
EXOSC3Q9NQT5 AC007751.1-201ENST00000529260 376 ntBASIC0.68□□□□□ -2.3
EXOSC3Q9NQT5 AP001282.2-201ENST00000616149 309 ntBASIC0.68□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.11-201ENST00000362375 109 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-238P-201ENST00000363313 106 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.229-201ENST00000364347 113 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.241-201ENST00000364470 117 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-396P-201ENST00000365369 105 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 Y_RNA.376-201ENST00000365638 108 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-713P-201ENST00000384761 107 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 SNORD111-201ENST00000408139 94 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-613P-201ENST00000410412 108 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-651P-201ENST00000411040 105 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 RNU2-13P-201ENST00000515909 113 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-635P-201ENST00000516651 102 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 AP003072.1-201ENST00000531740 145 ntBASIC0.67□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-740P-201ENST00000364734 105 ntBASIC0.66□□□□□ -2.3
EXOSC3Q9NQT5 SNORA8.3-201ENST00000384679 139 ntBASIC0.66□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-205P-201ENST00000390858 107 ntBASIC0.66□□□□□ -2.3
EXOSC3Q9NQT5 MIR1276-201ENST00000408707 83 ntBASIC0.66□□□□□ -2.3
EXOSC3Q9NQT5 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
EXOSC3Q9NQT5 AC067940.1-201ENST00000458411 300 ntBASIC0.66□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-693P-201ENST00000516134 107 ntBASIC0.66□□□□□ -2.3
EXOSC3Q9NQT5 RNU6-1270P-201ENST00000517128 108 ntBASIC0.66□□□□□ -2.3
EXOSC3Q9NQT5 AL353765.1-201ENST00000605514 183 ntBASIC0.66□□□□□ -2.3
EXOSC3Q9NQT5 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.44-201ENST00000362676 108 ntBASIC0.65□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-28-201ENST00000363931 81 ntBASIC0.65□□□□□ -2.31
EXOSC3Q9NQT5 MIR518F-201ENST00000384973 87 ntBASIC0.65□□□□□ -2.31
EXOSC3Q9NQT5 AC090844.1-201ENST00000422019 156 ntBASIC0.65□□□□□ -2.31
EXOSC3Q9NQT5 RNU7-67P-201ENST00000459003 62 ntBASIC0.65□□□□□ -2.31
EXOSC3Q9NQT5 AC107297.1-201ENST00000459991 176 ntBASIC0.65□□□□□ -2.31
EXOSC3Q9NQT5 MIR4662B-201ENST00000579498 81 ntBASIC0.65□□□□□ -2.31
EXOSC3Q9NQT5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.65□□□□□ -2.31
EXOSC3Q9NQT5 SNORD45.3-201ENST00000363836 72 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 SNORD61-201ENST00000384252 73 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 RNU6-125P-201ENST00000384505 107 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 MIR548A2-201ENST00000384956 97 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 MIR626-201ENST00000385032 94 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 MT-TT-201ENST00000387460 66 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 SNORD99-201ENST00000408612 74 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 RNU6-938P-201ENST00000411285 103 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 AC006461.1-201ENST00000412637 326 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 RPS26P5-201ENST00000418544 335 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 U7.7-201ENST00000459276 60 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 snoU13.21-201ENST00000459368 105 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms