Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU1-58P-201ENST00000362413 163 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 SNORA16B-201ENST00000364674 135 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 RNA5SP190-201ENST00000365222 118 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 MIR520G-201ENST00000385064 90 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 RNU11-5P-201ENST00000391216 129 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 CST2P1-201ENST00000425770 87 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 HMGN1P7-201ENST00000491722 313 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 RN7SKP19-201ENST00000516016 252 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 Y_RNA.666-201ENST00000516187 112 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 SNORA18.4-201ENST00000516440 124 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 RNU6-365P-201ENST00000517113 106 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 RNU6-1270P-201ENST00000517128 108 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 SNORA31.25-201ENST00000517242 134 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 AC008507.4-201ENST00000585464 127 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 AL670379.3-201ENST00000605040 251 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 AL359075.3-201ENST00000613288 217 ntBASIC1.91□□□□□ -2.1
EBF3Q9H4W6 RNU6-23P-201ENST00000363283 107 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 SNORD116-21-201ENST00000384507 92 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 AL627390.1-201ENST00000396055 340 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 SNRPGP10-201ENST00000432323 225 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 AC023449.1-201ENST00000454464 154 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 SNORD13-201ENST00000459299 104 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 RPS29P11-201ENST00000496507 171 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 Y_RNA.676-201ENST00000516393 96 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 AC024995.1-201ENST00000523014 93 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 MIR4662B-201ENST00000579498 81 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 AC078899.2-201ENST00000595282 212 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 AL591926.4-201ENST00000616895 298 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 MIR6079-201ENST00000635807 62 ntBASIC1.9□□□□□ -2.11
EBF3Q9H4W6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.9□□□□□ -2.11
EBF3Q9H4W6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
EBF3Q9H4W6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
EBF3Q9H4W6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
EBF3Q9H4W6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
EBF3Q9H4W6 RNU6-647P-201ENST00000364243 107 ntBASIC1.89□□□□□ -2.11
EBF3Q9H4W6 Y_RNA.267-201ENST00000364679 109 ntBASIC1.89□□□□□ -2.11
EBF3Q9H4W6 SNORD18B-201ENST00000365659 72 ntBASIC1.89□□□□□ -2.11
EBF3Q9H4W6 MIR548A1-201ENST00000385041 97 ntBASIC1.89□□□□□ -2.11
EBF3Q9H4W6 SNORD77.3-201ENST00000391113 65 ntBASIC1.89□□□□□ -2.11
EBF3Q9H4W6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.89□□□□□ -2.11
EBF3Q9H4W6 SCARNA15-202ENST00000516881 127 ntBASIC1.89□□□□□ -2.11
EBF3Q9H4W6 AC005786.1-201ENST00000588553 154 ntBASIC1.89□□□□□ -2.11
EBF3Q9H4W6 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
EBF3Q9H4W6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.89□□□□□ -2.11
EBF3Q9H4W6 AC022513.1-201ENST00000624512 117 ntBASIC1.89□□□□□ -2.11
EBF3Q9H4W6 AC018630.2-201ENST00000534866 2403 ntBASIC1.89□□□□□ -2.11
EBF3Q9H4W6 SNORA1B-201ENST00000362535 133 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 RNU6-888P-201ENST00000363010 101 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 MIR518F-201ENST00000384973 87 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 MIR548A3-201ENST00000385297 97 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 SNORA26-201ENST00000391286 122 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 AF228730.3-201ENST00000436691 102 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 RNU6-504P-201ENST00000516568 104 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 RNU1-142P-201ENST00000516682 145 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 RNU6-1149P-201ENST00000516810 97 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 RNU6-341P-201ENST00000516973 96 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.88□□□□□ -2.11
EBF3Q9H4W6 MIR4529-201ENST00000578110 78 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 MIR4679-2-201ENST00000578358 77 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 AC025166.1-201ENST00000612411 163 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 MTND5P18-201ENST00000445624 1801 ntBASIC1.88□□□□□ -2.11
EBF3Q9H4W6 MIR126-201ENST00000362291 85 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 Y_RNA.43-201ENST00000362670 111 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 RNU6-862P-201ENST00000362804 105 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 RNU6-457P-201ENST00000363999 107 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 RNU6-1292P-201ENST00000383856 107 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 SNORD24-201ENST00000383884 75 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 MIR522-201ENST00000385071 87 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 HMGN2P39-201ENST00000398005 273 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 RNA5SP89-201ENST00000410300 108 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 BX510359.4-201ENST00000423750 193 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 CALM2P4-201ENST00000430810 426 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 AC099677.2-201ENST00000436385 175 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 AL606517.2-201ENST00000442855 241 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.87□□□□□ -2.11
EBF3Q9H4W6 AC055731.1-201ENST00000474387 401 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.87□□□□□ -2.11
EBF3Q9H4W6 RNA5SP170-201ENST00000517150 101 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 RNU2-19P-201ENST00000517288 84 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 MIR3683-201ENST00000580847 82 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 AL121890.5-201ENST00000620848 304 ntBASIC1.87□□□□□ -2.11
EBF3Q9H4W6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.87□□□□□ -2.11
EBF3Q9H4W6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
EBF3Q9H4W6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
EBF3Q9H4W6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.86□□□□□ -2.11
EBF3Q9H4W6 SNORD115-3-201ENST00000363100 82 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 RNU6-1255P-201ENST00000363434 112 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 Y_RNA.164-201ENST00000363709 102 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 MIR518A2-201ENST00000384966 87 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 RNA5SP465-201ENST00000391195 109 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 MIR1263-201ENST00000408324 86 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 MIR1283-2-201ENST00000408621 87 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 Y_RNA.649-201ENST00000459077 103 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 AL163195.1-201ENST00000496941 348 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 AC108729.3-201ENST00000513484 108 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 RNU6-693P-201ENST00000516134 107 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 722.6 ms