Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC233266.1-201ENST00000454518 96 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 AC104435.1-201ENST00000483483 166 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS11Q9H270 AL353149.1-201ENST00000610667 244 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 AC242852.1-201ENST00000612151 96 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 AC244015.1-201ENST00000622301 99 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 AL162726.3-218ENST00000636401 95 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS11Q9H270 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS11Q9H270 MIR126-201ENST00000362291 85 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 Y_RNA.265-201ENST00000364677 108 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 Y_RNA.510-201ENST00000384511 114 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 MIR522-201ENST00000385071 87 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 AL359511.1-201ENST00000402970 211 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 MIR548O-201ENST00000408583 114 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 SNRPGP14-201ENST00000435400 219 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS11Q9H270 RNU7-164P-201ENST00000459221 62 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 SNORA59A-201ENST00000459326 152 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 AC026436.1-201ENST00000510537 270 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 RNA5SP356-201ENST00000515972 94 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 RNU2-35P-201ENST00000516446 142 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 RNU7-25P-201ENST00000516544 62 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 SNORD36C-201ENST00000516733 66 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 MIR6852-201ENST00000621699 66 ntBASIC2.35□□□□□ -2.03
VPS11Q9H270 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS11Q9H270 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VPS11Q9H270 SNORA33-201ENST00000363664 130 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 SNORA63D-201ENST00000364359 132 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 RNY1P6-201ENST00000384193 109 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 SNORA48.1-201ENST00000390879 135 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 RNA5SP467-201ENST00000391274 118 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 MIR1255A-201ENST00000408338 113 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 AC022137.1-201ENST00000483735 151 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS11Q9H270 AC091544.4-201ENST00000555268 342 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 MIR4319-201ENST00000577285 85 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 HSPE1P19-201ENST00000603327 295 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 AC022513.1-201ENST00000624512 117 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS11Q9H270 MIR1291-201ENST00000627649 87 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 MIR6079-201ENST00000635807 62 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.34□□□□□ -2.03
VPS11Q9H270 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS11Q9H270 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VPS11Q9H270 Y_RNA.37-201ENST00000362606 108 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 Y_RNA.73-201ENST00000362910 113 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 RNY3P2-201ENST00000362918 102 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 RNU6-1189P-201ENST00000383958 107 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 Y_RNA.410-201ENST00000383992 113 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 RNU6-787P-201ENST00000384032 107 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 Y_RNA.440-201ENST00000384120 114 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 MIR1253-201ENST00000408273 105 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 RNA5SP501-201ENST00000410990 112 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 FTH1P12-201ENST00000432137 551 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS11Q9H270 SCARNA23-201ENST00000516060 130 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 RNU7-99P-201ENST00000516271 62 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 RNU6-341P-201ENST00000516973 96 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 AC022217.4-201ENST00000604389 163 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 AC006441.5-201ENST00000612680 209 ntBASIC2.33□□□□□ -2.04
VPS11Q9H270 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS11Q9H270 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS11Q9H270 ZNF658B-202ENST00000615961 3375 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS11Q9H270 SNORA1B-201ENST00000362535 133 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 snoU2-30.2-201ENST00000362805 70 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 RNU6-1099P-201ENST00000363533 107 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 Y_RNA.267-201ENST00000364679 109 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 Y_RNA.547-201ENST00000384654 119 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 RNU6-813P-201ENST00000384691 107 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 RNU6-816P-201ENST00000390914 107 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 RNU6-1268P-201ENST00000391214 107 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 U8.17-201ENST00000391292 132 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 RNU6-1239P-201ENST00000391310 107 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 RPS15AP28-201ENST00000435088 386 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 RPL39P25-201ENST00000449384 154 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 RNU7-61P-201ENST00000515897 61 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 SNORA31.4-201ENST00000516049 129 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 RNU6-1041P-201ENST00000516254 102 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 RNU6-65P-201ENST00000516332 98 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 DEFB131E-201ENST00000532329 154 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 MIR4305-201ENST00000583252 102 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 MIR548Z-201ENST00000584743 97 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 AC087685.1-201ENST00000587507 141 ntBASIC2.32□□□□□ -2.04
VPS11Q9H270 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
VPS11Q9H270 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS11Q9H270 AC018630.2-201ENST00000534866 2403 ntBASIC2.31□□□□□ -2.04
VPS11Q9H270 AC245060.5-201ENST00000610778 3293 ntBASIC2.31□□□□□ -2.04
VPS11Q9H270 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS11Q9H270 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VPS11Q9H270 AC062016.1-201ENST00000355719 319 ntBASIC2.31□□□□□ -2.04
VPS11Q9H270 RNU6-268P-201ENST00000364174 107 ntBASIC2.31□□□□□ -2.04
VPS11Q9H270 SNORA11.4-201ENST00000408823 129 ntBASIC2.31□□□□□ -2.04
VPS11Q9H270 RNA5SP184-201ENST00000411071 108 ntBASIC2.31□□□□□ -2.04
VPS11Q9H270 RPS27P21-201ENST00000486977 252 ntBASIC2.31□□□□□ -2.04
VPS11Q9H270 AC113410.1-201ENST00000505029 247 ntBASIC2.31□□□□□ -2.04
VPS11Q9H270 RNA5SP148-201ENST00000516527 94 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms