Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RNA5SP489-201ENST00000410986 109 ntBASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 SUMO1P3-201ENST00000439961 304 ntBASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 AC087499.4-201ENST00000448505 178 ntBASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 Y_RNA.703-201ENST00000516846 111 ntBASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 AL365205.2-201ENST00000594586 68 ntBASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 SNRPGP19-201ENST00000603826 189 ntBASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 Y_RNA.37-201ENST00000362606 108 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 RNU6-1082P-201ENST00000364574 107 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 RNU6-1292P-201ENST00000383856 107 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 RNU6-1336P-201ENST00000383886 109 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 RNY1P5-201ENST00000383890 115 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 RNU6-1189P-201ENST00000383958 107 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 MIR526A1-201ENST00000384897 85 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 U8.17-201ENST00000391292 132 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 AF228730.3-201ENST00000436691 102 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 AC107297.1-201ENST00000459991 176 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 RNU6-346P-201ENST00000516288 111 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 SNORA18.7-201ENST00000516910 131 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 MIR548X2-201ENST00000579776 100 ntBASIC2.16□□□□□ -2.06
CCDC113Q9H0I3 SNORA1.2-201ENST00000365189 134 ntBASIC2.15□□□□□ -2.07
CCDC113Q9H0I3 U8.13-201ENST00000390842 128 ntBASIC2.15□□□□□ -2.07
CCDC113Q9H0I3 AL451046.2-201ENST00000403074 277 ntBASIC2.15□□□□□ -2.07
CCDC113Q9H0I3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC113Q9H0I3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC113Q9H0I3 RNU6-125P-201ENST00000384505 107 ntBASIC2.14□□□□□ -2.07
CCDC113Q9H0I3 RNU6-1067P-201ENST00000384752 107 ntBASIC2.14□□□□□ -2.07
CCDC113Q9H0I3 SNORD77.3-201ENST00000391113 65 ntBASIC2.14□□□□□ -2.07
CCDC113Q9H0I3 SNORA25.12-201ENST00000516202 82 ntBASIC2.14□□□□□ -2.07
CCDC113Q9H0I3 RNU6-917P-201ENST00000516294 104 ntBASIC2.14□□□□□ -2.07
CCDC113Q9H0I3 RNU7-181P-201ENST00000517234 74 ntBASIC2.14□□□□□ -2.07
CCDC113Q9H0I3 AP003484.1-201ENST00000530974 250 ntBASIC2.14□□□□□ -2.07
CCDC113Q9H0I3 AC090049.2-201ENST00000550377 109 ntBASIC2.14□□□□□ -2.07
CCDC113Q9H0I3 AC015688.6-201ENST00000577737 104 ntBASIC2.14□□□□□ -2.07
CCDC113Q9H0I3 MIR3198-2-201ENST00000577868 80 ntBASIC2.14□□□□□ -2.07
CCDC113Q9H0I3 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.14□□□□□ -2.07
CCDC113Q9H0I3 Y_RNA.241-201ENST00000364470 117 ntBASIC2.13□□□□□ -2.07
CCDC113Q9H0I3 SNORD18B-201ENST00000365659 72 ntBASIC2.13□□□□□ -2.07
CCDC113Q9H0I3 MIR624-201ENST00000385217 97 ntBASIC2.13□□□□□ -2.07
CCDC113Q9H0I3 Y_RNA.584-201ENST00000391090 114 ntBASIC2.13□□□□□ -2.07
CCDC113Q9H0I3 AC005908.1-201ENST00000468701 347 ntBASIC2.13□□□□□ -2.07
CCDC113Q9H0I3 RNU4-57P-201ENST00000515980 135 ntBASIC2.13□□□□□ -2.07
CCDC113Q9H0I3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.13□□□□□ -2.07
CCDC113Q9H0I3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.13□□□□□ -2.07
CCDC113Q9H0I3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC113Q9H0I3 SNORD33-201ENST00000362761 85 ntBASIC2.12□□□□□ -2.07
CCDC113Q9H0I3 SNORD123-201ENST00000459473 70 ntBASIC2.12□□□□□ -2.07
CCDC113Q9H0I3 AC092991.1-201ENST00000477176 376 ntBASIC2.12□□□□□ -2.07
CCDC113Q9H0I3 AC079140.2-201ENST00000506193 142 ntBASIC2.12□□□□□ -2.07
CCDC113Q9H0I3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.12□□□□□ -2.07
CCDC113Q9H0I3 AC131055.1-201ENST00000584626 316 ntBASIC2.12□□□□□ -2.07
CCDC113Q9H0I3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC113Q9H0I3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC113Q9H0I3 Y_RNA.370-201ENST00000365589 108 ntBASIC2.11□□□□□ -2.07
CCDC113Q9H0I3 MIR653-201ENST00000385279 96 ntBASIC2.11□□□□□ -2.07
CCDC113Q9H0I3 RNU7-70P-201ENST00000516941 66 ntBASIC2.11□□□□□ -2.07
CCDC113Q9H0I3 AL513534.2-201ENST00000603836 250 ntBASIC2.11□□□□□ -2.07
CCDC113Q9H0I3 MIR6715A-201ENST00000615929 79 ntBASIC2.11□□□□□ -2.07
CCDC113Q9H0I3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC113Q9H0I3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC113Q9H0I3 MIR504-201ENST00000385065 83 ntBASIC2.1□□□□□ -2.07
CCDC113Q9H0I3 SNX2P2-201ENST00000424553 323 ntBASIC2.1□□□□□ -2.07
CCDC113Q9H0I3 SNORD36C-201ENST00000516733 66 ntBASIC2.1□□□□□ -2.07
CCDC113Q9H0I3 SNORA74.3-201ENST00000517108 154 ntBASIC2.1□□□□□ -2.07
CCDC113Q9H0I3 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
CCDC113Q9H0I3 MIR4448-201ENST00000584360 86 ntBASIC2.1□□□□□ -2.07
CCDC113Q9H0I3 MIR6845-201ENST00000613182 61 ntBASIC2.1□□□□□ -2.07
CCDC113Q9H0I3 SNORD1A-201ENST00000364968 72 ntBASIC2.09□□□□□ -2.07
CCDC113Q9H0I3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCDC113Q9H0I3 SNORA40.5-201ENST00000391061 128 ntBASIC2.09□□□□□ -2.07
CCDC113Q9H0I3 AC008834.1-201ENST00000511612 175 ntBASIC2.09□□□□□ -2.07
CCDC113Q9H0I3 RNA5SP182-201ENST00000516064 82 ntBASIC2.09□□□□□ -2.07
CCDC113Q9H0I3 RNU6-922P-201ENST00000516753 99 ntBASIC2.09□□□□□ -2.07
CCDC113Q9H0I3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCDC113Q9H0I3 MIR3937-201ENST00000580135 106 ntBASIC2.09□□□□□ -2.07
CCDC113Q9H0I3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC113Q9H0I3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC113Q9H0I3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.09□□□□□ -2.08
CCDC113Q9H0I3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CCDC113Q9H0I3 Y_RNA.497-201ENST00000384447 98 ntBASIC2.08□□□□□ -2.08
CCDC113Q9H0I3 RNU6-1065P-201ENST00000384513 106 ntBASIC2.08□□□□□ -2.08
CCDC113Q9H0I3 MIR520C-201ENST00000385005 87 ntBASIC2.08□□□□□ -2.08
CCDC113Q9H0I3 MIR764-201ENST00000390811 85 ntBASIC2.08□□□□□ -2.08
CCDC113Q9H0I3 AC003989.2-201ENST00000440224 169 ntBASIC2.08□□□□□ -2.08
CCDC113Q9H0I3 MIR548AR-201ENST00000582191 57 ntBASIC2.08□□□□□ -2.08
CCDC113Q9H0I3 MIR5197-201ENST00000583721 112 ntBASIC2.08□□□□□ -2.08
CCDC113Q9H0I3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC113Q9H0I3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
CCDC113Q9H0I3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 RNU6-187P-201ENST00000384139 106 ntBASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 SNORA27-201ENST00000384323 126 ntBASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 MIR569-201ENST00000385228 96 ntBASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 MIR613-201ENST00000385248 95 ntBASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 AL627390.1-201ENST00000396055 340 ntBASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 AC019129.1-201ENST00000403786 261 ntBASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 RNU6-938P-201ENST00000411285 103 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms