Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RNF38Q9H0F5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
RNF38Q9H0F5 MIR21-201ENST00000362134 72 ntBASIC2.43□□□□□ -2.02
RNF38Q9H0F5 MIR342-201ENST00000362212 99 ntBASIC2.43□□□□□ -2.02
RNF38Q9H0F5 RNU6-349P-201ENST00000362402 107 ntBASIC2.43□□□□□ -2.02
RNF38Q9H0F5 Y_RNA.213-201ENST00000364178 111 ntBASIC2.43□□□□□ -2.02
RNF38Q9H0F5 RNU1-133P-201ENST00000364867 167 ntBASIC2.43□□□□□ -2.02
RNF38Q9H0F5 SNORA51.10-201ENST00000384418 136 ntBASIC2.43□□□□□ -2.02
RNF38Q9H0F5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RNF38Q9H0F5 U8.17-201ENST00000391292 132 ntBASIC2.43□□□□□ -2.02
RNF38Q9H0F5 MIR1302-5-201ENST00000408164 150 ntBASIC2.43□□□□□ -2.02
RNF38Q9H0F5 RN7SKP223-201ENST00000410582 62 ntBASIC2.43□□□□□ -2.02
RNF38Q9H0F5 SUMO2P16-201ENST00000519475 264 ntBASIC2.43□□□□□ -2.02
RNF38Q9H0F5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.43□□□□□ -2.02
RNF38Q9H0F5 AC022513.1-201ENST00000624512 117 ntBASIC2.43□□□□□ -2.02
RNF38Q9H0F5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.42□□□□□ -2.02
RNF38Q9H0F5 AL596211.1-201ENST00000569873 2277 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 RNU6-766P-201ENST00000362478 107 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 Y_RNA.198-201ENST00000364013 98 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 RNU4-16P-201ENST00000364737 141 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 RNU6-1014P-201ENST00000383940 103 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 MT-TI-201ENST00000387365 69 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 RNA5SP482-201ENST00000391269 118 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 SNORA11.4-201ENST00000408823 129 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 RNU6-938P-201ENST00000411285 103 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 RNU7-164P-201ENST00000459221 62 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 AC114811.1-201ENST00000507207 168 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 RNU6-830P-201ENST00000516353 107 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 AP003484.1-201ENST00000530974 250 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 HSPE1P19-201ENST00000603327 295 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 AL589743.1-201ENST00000551932 2712 ntBASIC2.42□□□□□ -2.02
RNF38Q9H0F5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RNF38Q9H0F5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
RNF38Q9H0F5 Y_RNA.328-201ENST00000365208 113 ntBASIC2.41□□□□□ -2.02
RNF38Q9H0F5 Y_RNA.351-201ENST00000365436 96 ntBASIC2.41□□□□□ -2.02
RNF38Q9H0F5 Y_RNA.362-201ENST00000365518 110 ntBASIC2.41□□□□□ -2.02
RNF38Q9H0F5 Y_RNA.440-201ENST00000384120 114 ntBASIC2.41□□□□□ -2.02
RNF38Q9H0F5 RNY1P6-201ENST00000384193 109 ntBASIC2.41□□□□□ -2.02
RNF38Q9H0F5 RNU6-163P-201ENST00000384396 106 ntBASIC2.41□□□□□ -2.02
RNF38Q9H0F5 RNU6-905P-201ENST00000384434 107 ntBASIC2.41□□□□□ -2.02
RNF38Q9H0F5 IGLV3-17-201ENST00000519099 244 ntBASIC2.41□□□□□ -2.02
RNF38Q9H0F5 AC022523.2-201ENST00000561045 150 ntBASIC2.41□□□□□ -2.02
RNF38Q9H0F5 MIR5007-201ENST00000583098 95 ntBASIC2.41□□□□□ -2.02
RNF38Q9H0F5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.41□□□□□ -2.02
RNF38Q9H0F5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
RNF38Q9H0F5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RNF38Q9H0F5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RNF38Q9H0F5 Y_RNA.298-201ENST00000364960 107 ntBASIC2.4□□□□□ -2.03
RNF38Q9H0F5 Y_RNA.336-201ENST00000365307 109 ntBASIC2.4□□□□□ -2.03
RNF38Q9H0F5 RNU1-51P-201ENST00000365345 176 ntBASIC2.4□□□□□ -2.03
RNF38Q9H0F5 Y_RNA.348-201ENST00000365403 103 ntBASIC2.4□□□□□ -2.03
RNF38Q9H0F5 RNU6-440P-201ENST00000390882 105 ntBASIC2.4□□□□□ -2.03
RNF38Q9H0F5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.4□□□□□ -2.03
RNF38Q9H0F5 RNA5SP501-201ENST00000410990 112 ntBASIC2.4□□□□□ -2.03
RNF38Q9H0F5 AL356320.1-201ENST00000429616 163 ntBASIC2.4□□□□□ -2.03
RNF38Q9H0F5 RPS12P2-201ENST00000439728 269 ntBASIC2.4□□□□□ -2.03
RNF38Q9H0F5 RNU7-123P-201ENST00000515911 60 ntBASIC2.4□□□□□ -2.03
RNF38Q9H0F5 U1.36-201ENST00000620684 176 ntBASIC2.4□□□□□ -2.03
RNF38Q9H0F5 MIR8054-201ENST00000620877 86 ntBASIC2.4□□□□□ -2.03
RNF38Q9H0F5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.4□□□□□ -2.03
RNF38Q9H0F5 Y_RNA.49-201ENST00000362714 112 ntBASIC2.39□□□□□ -2.03
RNF38Q9H0F5 RNU6-640P-201ENST00000363693 105 ntBASIC2.39□□□□□ -2.03
RNF38Q9H0F5 MIR759-201ENST00000390224 91 ntBASIC2.39□□□□□ -2.03
RNF38Q9H0F5 SNORA48.1-201ENST00000390879 135 ntBASIC2.39□□□□□ -2.03
RNF38Q9H0F5 RNVU1-2-201ENST00000516326 135 ntBASIC2.39□□□□□ -2.03
RNF38Q9H0F5 AC121758.2-201ENST00000553271 193 ntBASIC2.39□□□□□ -2.03
RNF38Q9H0F5 MIR5094-201ENST00000578766 85 ntBASIC2.39□□□□□ -2.03
RNF38Q9H0F5 MIR4648-201ENST00000580107 72 ntBASIC2.39□□□□□ -2.03
RNF38Q9H0F5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.39□□□□□ -2.03
RNF38Q9H0F5 AC091932.4-201ENST00000623386 200 ntBASIC2.39□□□□□ -2.03
RNF38Q9H0F5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RNF38Q9H0F5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RNF38Q9H0F5 RNY4P6-201ENST00000363667 96 ntBASIC2.38□□□□□ -2.03
RNF38Q9H0F5 Y_RNA.369-201ENST00000365568 117 ntBASIC2.38□□□□□ -2.03
RNF38Q9H0F5 RNU6-1104P-201ENST00000384723 104 ntBASIC2.38□□□□□ -2.03
RNF38Q9H0F5 RN7SKP192-201ENST00000411291 327 ntBASIC2.38□□□□□ -2.03
RNF38Q9H0F5 IGKV3-31-201ENST00000523109 329 ntBASIC2.38□□□□□ -2.03
RNF38Q9H0F5 MIR1273D-201ENST00000577266 86 ntBASIC2.38□□□□□ -2.03
RNF38Q9H0F5 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
RNF38Q9H0F5 AP001318.4-201ENST00000616637 121 ntBASIC2.38□□□□□ -2.03
RNF38Q9H0F5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RNF38Q9H0F5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
RNF38Q9H0F5 SNORA16B-201ENST00000364674 135 ntBASIC2.37□□□□□ -2.03
RNF38Q9H0F5 U8.6-201ENST00000364939 135 ntBASIC2.37□□□□□ -2.03
RNF38Q9H0F5 SNORD38C-201ENST00000384381 69 ntBASIC2.37□□□□□ -2.03
RNF38Q9H0F5 SNORA19.1-201ENST00000410656 129 ntBASIC2.37□□□□□ -2.03
RNF38Q9H0F5 HSPE1P9-201ENST00000440046 311 ntBASIC2.37□□□□□ -2.03
RNF38Q9H0F5 SNORA31.10-201ENST00000516482 106 ntBASIC2.37□□□□□ -2.03
RNF38Q9H0F5 AC084364.2-201ENST00000546924 395 ntBASIC2.37□□□□□ -2.03
RNF38Q9H0F5 AC069114.2-201ENST00000604699 304 ntBASIC2.37□□□□□ -2.03
RNF38Q9H0F5 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.37□□□□□ -2.03
RNF38Q9H0F5 MIR203B-201ENST00000636080 86 ntBASIC2.37□□□□□ -2.03
RNF38Q9H0F5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF38Q9H0F5 Y_RNA.241-201ENST00000364470 117 ntBASIC2.36□□□□□ -2.03
RNF38Q9H0F5 RNU6-1131P-201ENST00000364955 107 ntBASIC2.36□□□□□ -2.03
RNF38Q9H0F5 Y_RNA.323-201ENST00000365157 109 ntBASIC2.36□□□□□ -2.03
RNF38Q9H0F5 Y_RNA.344-201ENST00000365381 112 ntBASIC2.36□□□□□ -2.03
RNF38Q9H0F5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.36□□□□□ -2.03
RNF38Q9H0F5 RNU6-109P-201ENST00000516364 107 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 544.8 ms