Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
NDUFAF3Q9BU61 MIR4698-201ENST00000577795 80 ntBASIC0.59□□□□□ -2.31
NDUFAF3Q9BU61 MIR5692C2-201ENST00000577959 77 ntBASIC0.59□□□□□ -2.31
NDUFAF3Q9BU61 AC011195.1-201ENST00000578177 177 ntBASIC0.59□□□□□ -2.31
NDUFAF3Q9BU61 MIR3973-201ENST00000579824 107 ntBASIC0.59□□□□□ -2.31
NDUFAF3Q9BU61 AL049861.1-201ENST00000603130 150 ntBASIC0.59□□□□□ -2.31
NDUFAF3Q9BU61 AP000753.3-201ENST00000604083 169 ntBASIC0.59□□□□□ -2.31
NDUFAF3Q9BU61 AC022709.1-201ENST00000615967 87 ntBASIC0.59□□□□□ -2.31
NDUFAF3Q9BU61 MIR6866-201ENST00000638146 69 ntBASIC0.59□□□□□ -2.31
NDUFAF3Q9BU61 MIR373-201ENST00000362273 69 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 MIR367-201ENST00000362299 68 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.105-201ENST00000363182 111 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.293-201ENST00000364908 93 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-290P-201ENST00000365212 101 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.376-201ENST00000365638 108 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.380-201ENST00000365663 111 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-474P-201ENST00000384243 107 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 MT-TN-201ENST00000387400 73 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 RNU1-119P-201ENST00000391122 165 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-121P-201ENST00000410525 99 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 MTND4LP11-201ENST00000422184 280 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 MTND4LP30-201ENST00000454092 297 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.631-201ENST00000459607 101 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 AC098869.1-201ENST00000481627 292 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 RNU2-31P-201ENST00000516954 155 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 MIR4724-201ENST00000579485 89 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 AC037487.3-201ENST00000606668 112 ntBASIC0.58□□□□□ -2.32
NDUFAF3Q9BU61 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 SNORA25.1-201ENST00000362326 128 ntBASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.394-201ENST00000383942 103 ntBASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-514P-201ENST00000384208 107 ntBASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 MIR598-201ENST00000384868 97 ntBASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 SNORA53-201ENST00000391141 249 ntBASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 AC244098.3-201ENST00000424803 96 ntBASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.666-201ENST00000516187 112 ntBASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 AC133485.1-201ENST00000567176 124 ntBASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 AC138907.6-201ENST00000568401 126 ntBASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 AL160413.1-201ENST00000622780 310 ntBASIC0.57□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-1272P-201ENST00000362776 107 ntBASIC0.56□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-770P-201ENST00000363929 105 ntBASIC0.56□□□□□ -2.32
NDUFAF3Q9BU61 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-205P-201ENST00000390858 107 ntBASIC0.56□□□□□ -2.32
NDUFAF3Q9BU61 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.56□□□□□ -2.32
NDUFAF3Q9BU61 BTF3P11-201ENST00000426582 477 ntBASIC0.56□□□□□ -2.32
NDUFAF3Q9BU61 RNU7-67P-201ENST00000459003 62 ntBASIC0.56□□□□□ -2.32
NDUFAF3Q9BU61 RNY3P15-201ENST00000516297 97 ntBASIC0.56□□□□□ -2.32
NDUFAF3Q9BU61 AP001094.1-201ENST00000579805 193 ntBASIC0.56□□□□□ -2.32
NDUFAF3Q9BU61 AL021707.8-201ENST00000609428 183 ntBASIC0.56□□□□□ -2.32
NDUFAF3Q9BU61 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.56□□□□□ -2.32
NDUFAF3Q9BU61 MIR6835-201ENST00000621552 64 ntBASIC0.56□□□□□ -2.32
NDUFAF3Q9BU61 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 MIR377-201ENST00000362145 69 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 SNORD45.3-201ENST00000363836 72 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.241-201ENST00000364470 117 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-1138P-201ENST00000365359 106 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.354-201ENST00000365448 111 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-326P-201ENST00000365480 107 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-662P-201ENST00000384253 104 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.460-201ENST00000384255 102 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-125P-201ENST00000384505 107 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.541-201ENST00000384640 113 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 RNA5SP222-201ENST00000411039 105 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 ELOCP20-201ENST00000422460 345 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 snoU13.16-201ENST00000459350 104 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 AC091959.1-201ENST00000495857 238 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 AL590095.2-201ENST00000604136 117 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 MTND4P29-201ENST00000503122 1372 ntBASIC0.55□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-34-201ENST00000362441 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.19-201ENST00000362462 99 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-12-201ENST00000362583 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-29-201ENST00000362834 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-9-201ENST00000362912 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-21-201ENST00000362963 81 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 snoU2_19.2-201ENST00000363024 80 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-14-201ENST00000363090 81 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-13-201ENST00000363358 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.128-201ENST00000363391 112 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-41-201ENST00000363608 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-11-201ENST00000363616 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-5-201ENST00000363633 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-39-201ENST00000363694 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-4-201ENST00000363810 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-16-201ENST00000363887 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-6-201ENST00000363942 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.214-201ENST00000364201 112 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-42-201ENST00000364273 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-15-201ENST00000364809 81 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-1-201ENST00000364961 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-26-201ENST00000365067 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-10-201ENST00000365073 81 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-934P-201ENST00000365154 107 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 RNU6-580P-201ENST00000365159 107 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-43-201ENST00000365503 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 SNORD115-36-201ENST00000365629 82 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 Y_RNA.494-201ENST00000384432 111 ntBASIC0.54□□□□□ -2.32
NDUFAF3Q9BU61 MIR215-201ENST00000384858 110 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms