Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
NDC1Q9BTX1 Y_RNA.37-201ENST00000362606 108 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 SNORD114-1-201ENST00000362705 72 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 SNORD115-28-201ENST00000363931 81 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 SNORD58C-201ENST00000365223 64 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 RNU6-1189P-201ENST00000383958 107 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 Y_RNA.410-201ENST00000383992 113 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 RNU6-429P-201ENST00000384582 108 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 CALM2P4-201ENST00000430810 426 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.07□□□□□ -2.08
NDC1Q9BTX1 HMGN2P32-201ENST00000444648 269 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 snoU13.23-201ENST00000458863 104 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 AC055731.1-201ENST00000474387 401 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 RNA5SP437-201ENST00000517249 129 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 AC108081.1-201ENST00000604358 221 ntBASIC2.07□□□□□ -2.08
NDC1Q9BTX1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
NDC1Q9BTX1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NDC1Q9BTX1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
NDC1Q9BTX1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NDC1Q9BTX1 RNU6-1144P-201ENST00000384247 104 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 RNU6-476P-201ENST00000384726 107 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 RNU6-1031P-201ENST00000384773 107 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 SNORA48.3-201ENST00000391081 134 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.06□□□□□ -2.08
NDC1Q9BTX1 AL445646.1-201ENST00000431784 216 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 AL591806.2-201ENST00000433122 173 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 AC108210.2-201ENST00000503681 201 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 CYCTP-201ENST00000504253 315 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 RN7SKP19-201ENST00000516016 252 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 IGKV1-22-201ENST00000524313 326 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.06□□□□□ -2.08
NDC1Q9BTX1 MTND5P34-201ENST00000568888 325 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 DEFB122-202ENST00000569013 197 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 MIR4709-201ENST00000577272 72 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 MIR6129-201ENST00000616087 109 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 AC015726.2-201ENST00000620112 122 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 U6.95-201ENST00000636931 70 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 MIR219B-201ENST00000637023 88 ntBASIC2.06□□□□□ -2.08
NDC1Q9BTX1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NDC1Q9BTX1 SNORA2.2-201ENST00000365473 135 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 SNORA64-201ENST00000384674 134 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 MIR144-201ENST00000384886 86 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 U8.16-201ENST00000391279 133 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 RNA5SP100-201ENST00000410903 110 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 RNA5SP59-201ENST00000410922 110 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 RNU6-938P-201ENST00000411285 103 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 snoU13.27-201ENST00000459278 104 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 RNU7-34P-201ENST00000459394 64 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 AC104435.1-201ENST00000483483 166 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 SNORD33.1-201ENST00000516213 88 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 SNORD36C-201ENST00000516733 66 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.05□□□□□ -2.08
NDC1Q9BTX1 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 AC027279.3-201ENST00000625055 122 ntBASIC2.05□□□□□ -2.08
NDC1Q9BTX1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.05□□□□□ -2.08
NDC1Q9BTX1 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
NDC1Q9BTX1 RNU6-424P-201ENST00000384367 105 ntBASIC2.04□□□□□ -2.08
NDC1Q9BTX1 MIR764-201ENST00000390811 85 ntBASIC2.04□□□□□ -2.08
NDC1Q9BTX1 RNA5SP168-201ENST00000516642 112 ntBASIC2.04□□□□□ -2.08
NDC1Q9BTX1 RNA5SP82-201ENST00000516707 92 ntBASIC2.04□□□□□ -2.08
NDC1Q9BTX1 AC015712.3-201ENST00000559380 164 ntBASIC2.04□□□□□ -2.08
NDC1Q9BTX1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
NDC1Q9BTX1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NDC1Q9BTX1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.03□□□□□ -2.08
NDC1Q9BTX1 SNORD38C-201ENST00000384381 69 ntBASIC2.03□□□□□ -2.08
NDC1Q9BTX1 RNA5SP57-201ENST00000459463 123 ntBASIC2.03□□□□□ -2.08
NDC1Q9BTX1 AP003484.1-201ENST00000530974 250 ntBASIC2.03□□□□□ -2.08
NDC1Q9BTX1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.02□□□□□ -2.09
NDC1Q9BTX1 Y_RNA.440-201ENST00000384120 114 ntBASIC2.02□□□□□ -2.09
NDC1Q9BTX1 MIRLET7F2-201ENST00000385277 83 ntBASIC2.02□□□□□ -2.09
NDC1Q9BTX1 AC015922.2-201ENST00000435593 184 ntBASIC2.02□□□□□ -2.09
NDC1Q9BTX1 AC011753.1-201ENST00000451001 220 ntBASIC2.02□□□□□ -2.09
NDC1Q9BTX1 RNU6-113P-201ENST00000516653 101 ntBASIC2.02□□□□□ -2.09
NDC1Q9BTX1 SNORA31.17-201ENST00000516953 127 ntBASIC2.02□□□□□ -2.09
NDC1Q9BTX1 AL670379.3-201ENST00000605040 251 ntBASIC2.02□□□□□ -2.09
NDC1Q9BTX1 AC025166.1-201ENST00000612411 163 ntBASIC2.02□□□□□ -2.09
NDC1Q9BTX1 RNA5SP276-201ENST00000362580 94 ntBASIC2.01□□□□□ -2.09
NDC1Q9BTX1 RNU6-833P-201ENST00000363486 107 ntBASIC2.01□□□□□ -2.09
NDC1Q9BTX1 Y_RNA.366-201ENST00000365540 102 ntBASIC2.01□□□□□ -2.09
NDC1Q9BTX1 SNORA67.3-201ENST00000384366 140 ntBASIC2.01□□□□□ -2.09
NDC1Q9BTX1 RNY4P18-201ENST00000391107 89 ntBASIC2.01□□□□□ -2.09
NDC1Q9BTX1 MIR1263-201ENST00000408324 86 ntBASIC2.01□□□□□ -2.09
NDC1Q9BTX1 AC090255.1-201ENST00000495779 349 ntBASIC2.01□□□□□ -2.09
NDC1Q9BTX1 RNU7-12P-201ENST00000516030 62 ntBASIC2.01□□□□□ -2.09
NDC1Q9BTX1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
NDC1Q9BTX1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
NDC1Q9BTX1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2□□□□□ -2.09
NDC1Q9BTX1 MIR548A3-201ENST00000385297 97 ntBASIC2□□□□□ -2.09
NDC1Q9BTX1 RNU6-360P-201ENST00000390944 104 ntBASIC2□□□□□ -2.09
NDC1Q9BTX1 RNA5SP212-201ENST00000391223 107 ntBASIC2□□□□□ -2.09
NDC1Q9BTX1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2□□□□□ -2.09
NDC1Q9BTX1 AC087499.4-201ENST00000448505 178 ntBASIC2□□□□□ -2.09
NDC1Q9BTX1 SNORA18.7-201ENST00000516910 131 ntBASIC2□□□□□ -2.09
NDC1Q9BTX1 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
NDC1Q9BTX1 AC021506.2-201ENST00000612354 169 ntBASIC2□□□□□ -2.09
NDC1Q9BTX1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 587.9 ms