Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 Y_RNA.376-201ENST00000365638 108 ntBASIC0.55□□□□□ -2.32
KLHDC3Q9BQ90 RNU6-514P-201ENST00000384208 107 ntBASIC0.55□□□□□ -2.32
KLHDC3Q9BQ90 MIR548O-201ENST00000408583 114 ntBASIC0.55□□□□□ -2.32
KLHDC3Q9BQ90 Y_RNA.637-201ENST00000459424 114 ntBASIC0.55□□□□□ -2.32
KLHDC3Q9BQ90 AC098869.1-201ENST00000481627 292 ntBASIC0.55□□□□□ -2.32
KLHDC3Q9BQ90 COX6CP6-201ENST00000490840 228 ntBASIC0.55□□□□□ -2.32
KLHDC3Q9BQ90 RNU7-149P-201ENST00000516739 59 ntBASIC0.55□□□□□ -2.32
KLHDC3Q9BQ90 RNU2-31P-201ENST00000516954 155 ntBASIC0.55□□□□□ -2.32
KLHDC3Q9BQ90 MIR548AO-201ENST00000579992 96 ntBASIC0.55□□□□□ -2.32
KLHDC3Q9BQ90 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 MIR367-201ENST00000362299 68 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 SNORA25.1-201ENST00000362326 128 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 Y_RNA.14-201ENST00000362415 103 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 Y_RNA.105-201ENST00000363182 111 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 Y_RNA.128-201ENST00000363391 112 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 RNU6-326P-201ENST00000365480 107 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 RNU6-42P-201ENST00000384165 107 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 RNU6-474P-201ENST00000384243 107 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 Y_RNA.547-201ENST00000384654 119 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 RNA5SP95-201ENST00000410319 137 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 RNU6-121P-201ENST00000410525 99 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 RNU7-25P-201ENST00000516544 62 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 MIR5692C2-201ENST00000577959 77 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 SNORA4-201ENST00000584302 138 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 AC012433.1-201ENST00000588916 398 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 AL590095.2-201ENST00000604136 117 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 AC243994.1-201ENST00000618627 109 ntBASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
KLHDC3Q9BQ90 RNU6-383P-201ENST00000410864 94 ntBASIC0.53□□□□□ -2.32
KLHDC3Q9BQ90 AC098934.3-201ENST00000430450 190 ntBASIC0.53□□□□□ -2.32
KLHDC3Q9BQ90 AC107297.1-201ENST00000459991 176 ntBASIC0.53□□□□□ -2.32
KLHDC3Q9BQ90 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.53□□□□□ -2.32
KLHDC3Q9BQ90 AC004817.2-201ENST00000561794 651 ntBASIC0.53□□□□□ -2.32
KLHDC3Q9BQ90 MIR4724-201ENST00000579485 89 ntBASIC0.53□□□□□ -2.32
KLHDC3Q9BQ90 MIR4662B-201ENST00000579498 81 ntBASIC0.53□□□□□ -2.32
KLHDC3Q9BQ90 AL355297.3-201ENST00000604082 446 ntBASIC0.53□□□□□ -2.32
KLHDC3Q9BQ90 AP000753.3-201ENST00000604083 169 ntBASIC0.53□□□□□ -2.32
KLHDC3Q9BQ90 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.53□□□□□ -2.32
KLHDC3Q9BQ90 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
KLHDC3Q9BQ90 AC134503.1-201ENST00000633048 54 ntBASIC0.53□□□□□ -2.32
KLHDC3Q9BQ90 MIR1-1-201ENST00000362147 71 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-34-201ENST00000362441 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-12-201ENST00000362583 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-29-201ENST00000362834 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-9-201ENST00000362912 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-21-201ENST00000362963 81 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-14-201ENST00000363090 81 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.122-201ENST00000363331 96 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-13-201ENST00000363358 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-41-201ENST00000363608 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-11-201ENST00000363616 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-5-201ENST00000363633 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-39-201ENST00000363694 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-4-201ENST00000363810 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-16-201ENST00000363887 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-6-201ENST00000363942 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-42-201ENST00000364273 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-15-201ENST00000364809 81 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-1-201ENST00000364961 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-26-201ENST00000365067 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-10-201ENST00000365073 81 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 RNU6-580P-201ENST00000365159 107 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-43-201ENST00000365503 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-36-201ENST00000365629 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORA24-201ENST00000384096 131 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD105-201ENST00000386910 85 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 BTF3P11-201ENST00000426582 477 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 snoU13.16-201ENST00000459350 104 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 AC091959.1-201ENST00000495857 238 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD77.4-201ENST00000516158 81 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 RNA5SP121-201ENST00000516537 101 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 MIR4264-201ENST00000583520 66 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 AL049861.1-201ENST00000603130 150 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-40-201ENST00000606510 82 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 RMST_2.1-201ENST00000617263 136 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 MTND4P29-201ENST00000503122 1372 ntBASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
KLHDC3Q9BQ90 snoU2_19.2-201ENST00000363024 80 ntBASIC0.51□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.158-201ENST00000363651 101 ntBASIC0.51□□□□□ -2.33
KLHDC3Q9BQ90 RNU6-770P-201ENST00000363929 105 ntBASIC0.51□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.455-201ENST00000384230 98 ntBASIC0.51□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.541-201ENST00000384640 113 ntBASIC0.51□□□□□ -2.33
KLHDC3Q9BQ90 RNU1-119P-201ENST00000391122 165 ntBASIC0.51□□□□□ -2.33
KLHDC3Q9BQ90 AC087499.4-201ENST00000448505 178 ntBASIC0.51□□□□□ -2.33
KLHDC3Q9BQ90 RNU6-1143P-201ENST00000516125 104 ntBASIC0.51□□□□□ -2.33
KLHDC3Q9BQ90 RNU6-126P-201ENST00000516685 103 ntBASIC0.51□□□□□ -2.33
KLHDC3Q9BQ90 AC131281.1-201ENST00000522984 164 ntBASIC0.51□□□□□ -2.33
KLHDC3Q9BQ90 MIR5688-201ENST00000580619 83 ntBASIC0.51□□□□□ -2.33
KLHDC3Q9BQ90 MIR6734-201ENST00000621166 68 ntBASIC0.51□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.152-201ENST00000363578 100 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.217-201ENST00000364214 105 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.293-201ENST00000364908 93 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 SNORA22B-201ENST00000383876 138 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 MIR526A2-201ENST00000390198 65 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 MIR548P-201ENST00000408336 84 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 ELOCP20-201ENST00000422460 345 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 AC244098.3-201ENST00000424803 96 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.641-201ENST00000459414 105 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 snoU13.18-201ENST00000459483 104 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms