Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL021707.8-201ENST00000609428 183 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 snoU18.1-201ENST00000629629 71 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 MIR6516-201ENST00000630554 81 ntBASIC0.78□□□□□ -2.28
SSX3Q99909 Y_RNA.116-201ENST00000363292 103 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 RNU6-654P-201ENST00000364373 107 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 SNORD111-201ENST00000408139 94 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 RNU6-994P-201ENST00000410507 111 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 MTCYBP6-201ENST00000441810 138 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 MTND5P22-201ENST00000458380 195 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.77□□□□□ -2.29
SSX3Q99909 RNU6-1338P-201ENST00000516328 91 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 MIR2115-201ENST00000516657 100 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 SCARNA24.2-201ENST00000516968 130 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.77□□□□□ -2.29
SSX3Q99909 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 AC012433.1-201ENST00000588916 398 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 AC006006.1-201ENST00000603082 144 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 AL008718.3-201ENST00000610217 321 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 Y_RNA.802-201ENST00000614892 130 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 AC106800.4-201ENST00000614905 153 ntBASIC0.77□□□□□ -2.29
SSX3Q99909 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.77□□□□□ -2.29
SSX3Q99909 Y_RNA.11-201ENST00000362375 109 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 SNORD113.3-201ENST00000364630 78 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 RNU6-1138P-201ENST00000365359 106 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 RNU6-396P-201ENST00000365369 105 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 Y_RNA.547-201ENST00000384654 119 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 MIR520E-201ENST00000384867 87 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 MIR518E-201ENST00000385252 88 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 AC067940.1-201ENST00000458411 300 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 AC107297.1-201ENST00000459991 176 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 AC036111.3-201ENST00000526389 112 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.76□□□□□ -2.29
SSX3Q99909 MIR4662B-201ENST00000579498 81 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 RNU6-94P-201ENST00000607728 107 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 MIR6857-201ENST00000613267 93 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 MTND1P7-201ENST00000632801 297 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 MIR6767-201ENST00000637302 66 ntBASIC0.76□□□□□ -2.29
SSX3Q99909 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
SSX3Q99909 UBE2WP1-201ENST00000362030 340 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 Y_RNA.269-201ENST00000364685 89 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 RNU6-1227P-201ENST00000383981 107 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 SNORA2B-201ENST00000384583 137 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 MIR532-201ENST00000385025 91 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 MIR526A2-201ENST00000390198 65 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 SNORD89-201ENST00000390981 114 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 RNU6-1203P-201ENST00000410703 110 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 RPS26P5-201ENST00000418544 335 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 RPS29P1-201ENST00000465274 159 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 SNORD77.4-201ENST00000516158 81 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 Y_RNA.666-201ENST00000516187 112 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 RNU6-570P-201ENST00000517051 105 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 MIR548AO-201ENST00000579992 96 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 AC243994.1-201ENST00000618627 109 ntBASIC0.75□□□□□ -2.29
SSX3Q99909 Y_RNA.122-201ENST00000363331 96 ntBASIC0.74□□□□□ -2.29
SSX3Q99909 RNU4-10P-201ENST00000364383 140 ntBASIC0.74□□□□□ -2.29
SSX3Q99909 Y_RNA.587-201ENST00000391210 103 ntBASIC0.74□□□□□ -2.29
SSX3Q99909 RNU6-613P-201ENST00000410412 108 ntBASIC0.74□□□□□ -2.29
SSX3Q99909 U7.7-201ENST00000459276 60 ntBASIC0.74□□□□□ -2.29
SSX3Q99909 MTCO2P24-201ENST00000515611 426 ntBASIC0.74□□□□□ -2.29
SSX3Q99909 RNA5SP220-201ENST00000516298 104 ntBASIC0.74□□□□□ -2.29
SSX3Q99909 RNU6-1153P-201ENST00000516760 105 ntBASIC0.74□□□□□ -2.29
SSX3Q99909 DEFB108E-201ENST00000524692 240 ntBASIC0.74□□□□□ -2.29
SSX3Q99909 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.74□□□□□ -2.29
SSX3Q99909 MIR5688-201ENST00000580619 83 ntBASIC0.74□□□□□ -2.29
SSX3Q99909 MIR6734-201ENST00000621166 68 ntBASIC0.74□□□□□ -2.29
SSX3Q99909 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
SSX3Q99909 RNU6-211P-201ENST00000384047 107 ntBASIC0.73□□□□□ -2.29
SSX3Q99909 RNU6-1289P-201ENST00000384431 106 ntBASIC0.73□□□□□ -2.29
SSX3Q99909 SNORA8.3-201ENST00000384679 139 ntBASIC0.73□□□□□ -2.29
SSX3Q99909 RNU6-713P-201ENST00000384761 107 ntBASIC0.73□□□□□ -2.29
SSX3Q99909 RNA5SP95-201ENST00000410319 137 ntBASIC0.73□□□□□ -2.29
SSX3Q99909 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.73□□□□□ -2.29
SSX3Q99909 RNU2-13P-201ENST00000515909 113 ntBASIC0.73□□□□□ -2.29
SSX3Q99909 AC025627.3-201ENST00000582078 182 ntBASIC0.73□□□□□ -2.29
SSX3Q99909 7SK.10-201ENST00000621414 298 ntBASIC0.73□□□□□ -2.29
SSX3Q99909 Y_RNA.24-201ENST00000362508 103 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 Y_RNA.241-201ENST00000364470 117 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 Y_RNA.275-201ENST00000364726 110 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 RNU6-42P-201ENST00000384165 107 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 Y_RNA.486-201ENST00000384398 107 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 AL035398.1-201ENST00000430869 322 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
SSX3Q99909 TRBVB-201ENST00000477100 408 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 RNU6-1110P-201ENST00000516462 101 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 RNU6-126P-201ENST00000516685 103 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 SNORA4-201ENST00000584302 138 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 AL353765.1-201ENST00000605514 183 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 AC104465.1-201ENST00000611365 139 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 AL136317.1-201ENST00000612653 226 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.72□□□□□ -2.29
SSX3Q99909 Y_RNA.44-201ENST00000362676 108 ntBASIC0.71□□□□□ -2.3
SSX3Q99909 SNORD115-28-201ENST00000363931 81 ntBASIC0.71□□□□□ -2.3
SSX3Q99909 RNU6-1335P-201ENST00000365426 107 ntBASIC0.71□□□□□ -2.3
SSX3Q99909 RNU6-1109P-201ENST00000391187 107 ntBASIC0.71□□□□□ -2.3
SSX3Q99909 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.71□□□□□ -2.3
SSX3Q99909 RNU7-67P-201ENST00000459003 62 ntBASIC0.71□□□□□ -2.3
SSX3Q99909 MIR3973-201ENST00000579824 107 ntBASIC0.71□□□□□ -2.3
SSX3Q99909 MIR6788-201ENST00000618842 66 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms