Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RPS3AP1-201ENST00000413190 320 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 MTATP8P1-201ENST00000467115 207 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 MTCO2P24-201ENST00000515611 426 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 Y_RNA.666-201ENST00000516187 112 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 ACA64.5-201ENST00000516207 127 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 MIR5688-201ENST00000580619 83 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 AC006504.6-201ENST00000590142 199 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 AP001282.2-201ENST00000616149 309 ntBASIC0.79□□□□□ -2.28
RAB40CQ96S21 Y_RNA.117-201ENST00000363294 101 ntBASIC0.78□□□□□ -2.28
RAB40CQ96S21 RNU6-654P-201ENST00000364373 107 ntBASIC0.78□□□□□ -2.28
RAB40CQ96S21 Y_RNA.237-201ENST00000364439 102 ntBASIC0.78□□□□□ -2.28
RAB40CQ96S21 Y_RNA.512-201ENST00000384518 102 ntBASIC0.78□□□□□ -2.28
RAB40CQ96S21 Y_RNA.587-201ENST00000391210 103 ntBASIC0.78□□□□□ -2.28
RAB40CQ96S21 COX6CP14-201ENST00000469580 174 ntBASIC0.78□□□□□ -2.28
RAB40CQ96S21 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.78□□□□□ -2.28
RAB40CQ96S21 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.78□□□□□ -2.28
RAB40CQ96S21 Y_RNA.720-201ENST00000517166 92 ntBASIC0.78□□□□□ -2.28
RAB40CQ96S21 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
RAB40CQ96S21 AC106800.4-201ENST00000614905 153 ntBASIC0.78□□□□□ -2.28
RAB40CQ96S21 AC243994.1-201ENST00000618627 109 ntBASIC0.78□□□□□ -2.28
RAB40CQ96S21 MIR6516-201ENST00000630554 81 ntBASIC0.78□□□□□ -2.28
RAB40CQ96S21 Y_RNA.24-201ENST00000362508 103 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 RNU6-238P-201ENST00000363313 106 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 Y_RNA.238-201ENST00000364441 102 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 Y_RNA.326-201ENST00000365176 113 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 RNU6-53P-201ENST00000365367 106 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 Y_RNA.376-201ENST00000365638 108 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 MIR608-201ENST00000384820 100 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 MIR499A-201ENST00000384903 122 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 RNA5SP247-201ENST00000411181 105 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.77□□□□□ -2.29
RAB40CQ96S21 RNA5SP255-201ENST00000516370 107 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 MIR2115-201ENST00000516657 100 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 RNU6-197P-201ENST00000516680 100 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.77□□□□□ -2.29
RAB40CQ96S21 AC036111.3-201ENST00000526389 112 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 MIR548AO-201ENST00000579992 96 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 AC012433.1-201ENST00000588916 398 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 RNU6-94P-201ENST00000607728 107 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 MTND1P7-201ENST00000632801 297 ntBASIC0.77□□□□□ -2.29
RAB40CQ96S21 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.77□□□□□ -2.29
RAB40CQ96S21 SNORA63-201ENST00000363450 132 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 Y_RNA.229-201ENST00000364347 113 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 Y_RNA.241-201ENST00000364470 117 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 RNU6-740P-201ENST00000364734 105 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 RNU6-396P-201ENST00000365369 105 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 Y_RNA.486-201ENST00000384398 107 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 RNU6-1160P-201ENST00000384546 104 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 Y_RNA.572-201ENST00000384757 98 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 SNORD111-201ENST00000408139 94 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 RNU6-613P-201ENST00000410412 108 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 RNU6-994P-201ENST00000410507 111 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.76□□□□□ -2.29
RAB40CQ96S21 AC107297.1-201ENST00000459991 176 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 RNU2-13P-201ENST00000515909 113 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 RNU6-126P-201ENST00000516685 103 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 U2.14-201ENST00000615943 113 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 MIR8070-201ENST00000616510 88 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 U6.104-201ENST00000637979 90 ntBASIC0.76□□□□□ -2.29
RAB40CQ96S21 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
RAB40CQ96S21 SNORD115-28-201ENST00000363931 81 ntBASIC0.75□□□□□ -2.29
RAB40CQ96S21 SNORD113.3-201ENST00000364630 78 ntBASIC0.75□□□□□ -2.29
RAB40CQ96S21 SNORA2B-201ENST00000384583 137 ntBASIC0.75□□□□□ -2.29
RAB40CQ96S21 MIR626-201ENST00000385032 94 ntBASIC0.75□□□□□ -2.29
RAB40CQ96S21 RNA5SP95-201ENST00000410319 137 ntBASIC0.75□□□□□ -2.29
RAB40CQ96S21 AC067940.1-201ENST00000458411 300 ntBASIC0.75□□□□□ -2.29
RAB40CQ96S21 AC100767.1-201ENST00000528178 123 ntBASIC0.75□□□□□ -2.29
RAB40CQ96S21 SNORD115-34-201ENST00000362441 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-12-201ENST00000362583 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-29-201ENST00000362834 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-9-201ENST00000362912 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-21-201ENST00000362963 81 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-14-201ENST00000363090 81 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-13-201ENST00000363358 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-41-201ENST00000363608 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-11-201ENST00000363616 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-5-201ENST00000363633 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-39-201ENST00000363694 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-4-201ENST00000363810 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-16-201ENST00000363887 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-6-201ENST00000363942 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 Y_RNA.191-201ENST00000363972 113 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-42-201ENST00000364273 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-15-201ENST00000364809 81 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-1-201ENST00000364961 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-26-201ENST00000365067 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-10-201ENST00000365073 81 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-43-201ENST00000365503 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-36-201ENST00000365629 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 Y_RNA.461-201ENST00000384263 103 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 MIR1302-6-201ENST00000408466 90 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 MIR1287-201ENST00000408492 90 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 RNU6-693P-201ENST00000516134 107 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 RNU6-365P-201ENST00000517113 106 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 AC007751.1-201ENST00000529260 376 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 SNORD115-40-201ENST00000606510 82 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 MIR6504-201ENST00000613520 61 ntBASIC0.74□□□□□ -2.29
RAB40CQ96S21 MIR8062-201ENST00000621515 85 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 262.6 ms