Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 RNU6-1170P-201ENST00000515974 106 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 MIR1302-2-201ENST00000607096 138 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 MIR376A1-201ENST00000616574 68 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
VPS35Q96QK1 Y_RNA.136-201ENST00000363444 102 ntBASIC0.41□□□□□ -2.34
VPS35Q96QK1 Y_RNA.197-201ENST00000364004 102 ntBASIC0.41□□□□□ -2.34
VPS35Q96QK1 RNU6-144P-201ENST00000383951 107 ntBASIC0.41□□□□□ -2.34
VPS35Q96QK1 SNORA24-201ENST00000384096 131 ntBASIC0.41□□□□□ -2.34
VPS35Q96QK1 RNU6-102P-201ENST00000384485 104 ntBASIC0.41□□□□□ -2.34
VPS35Q96QK1 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
VPS35Q96QK1 RNU6-507P-201ENST00000516045 100 ntBASIC0.41□□□□□ -2.34
VPS35Q96QK1 RNU6-764P-201ENST00000516396 105 ntBASIC0.41□□□□□ -2.34
VPS35Q96QK1 RNU7-149P-201ENST00000516739 59 ntBASIC0.41□□□□□ -2.34
VPS35Q96QK1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.41□□□□□ -2.34
VPS35Q96QK1 AC134878.1-201ENST00000619901 243 ntBASIC0.41□□□□□ -2.34
VPS35Q96QK1 Y_RNA.112-201ENST00000363250 102 ntBASIC0.4□□□□□ -2.35
VPS35Q96QK1 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
VPS35Q96QK1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.4□□□□□ -2.35
VPS35Q96QK1 Y_RNA.602-201ENST00000410535 92 ntBASIC0.4□□□□□ -2.35
VPS35Q96QK1 AC090844.1-201ENST00000422019 156 ntBASIC0.4□□□□□ -2.35
VPS35Q96QK1 C8orf59P2-201ENST00000603441 271 ntBASIC0.4□□□□□ -2.35
VPS35Q96QK1 AL021707.8-201ENST00000609428 183 ntBASIC0.4□□□□□ -2.35
VPS35Q96QK1 SNORD115-34-201ENST00000362441 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-12-201ENST00000362583 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-29-201ENST00000362834 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-9-201ENST00000362912 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-21-201ENST00000362963 81 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-14-201ENST00000363090 81 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-13-201ENST00000363358 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-41-201ENST00000363608 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-11-201ENST00000363616 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-5-201ENST00000363633 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-39-201ENST00000363694 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-4-201ENST00000363810 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-16-201ENST00000363887 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-6-201ENST00000363942 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-42-201ENST00000364273 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 Y_RNA.241-201ENST00000364470 117 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-15-201ENST00000364809 81 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-1-201ENST00000364961 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-26-201ENST00000365067 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-10-201ENST00000365073 81 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-43-201ENST00000365503 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-36-201ENST00000365629 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 Y_RNA.424-201ENST00000384063 103 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 Y_RNA.445-201ENST00000384168 102 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 RNU6-383P-201ENST00000410864 94 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 MTND5P20-201ENST00000448677 143 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.39□□□□□ -2.35
VPS35Q96QK1 HSPE1P25-201ENST00000455484 251 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 RNU7-62P-201ENST00000458856 62 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 RNU7-67P-201ENST00000459003 62 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 MRPS35P2-201ENST00000508242 191 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 RNU6-397P-201ENST00000516226 104 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 AL355297.3-201ENST00000604082 446 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 LARP7P1-201ENST00000605576 316 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 SNORD115-40-201ENST00000606510 82 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 AL589743.1-201ENST00000551932 2712 ntBASIC0.39□□□□□ -2.35
VPS35Q96QK1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
VPS35Q96QK1 MIR18A-201ENST00000362310 71 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 Y_RNA.14-201ENST00000362415 103 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 RNY1-201ENST00000364228 113 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 RNU4-45P-201ENST00000365469 141 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 MIR598-201ENST00000384868 97 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
VPS35Q96QK1 AC244023.1-201ENST00000426884 112 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 MTCO1P5-201ENST00000433573 344 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.38□□□□□ -2.35
VPS35Q96QK1 Y_RNA.666-201ENST00000516187 112 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 Y_RNA.702-201ENST00000516843 96 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 MIR3612-201ENST00000579753 87 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 MIR4804-201ENST00000581683 73 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 MIR4676-201ENST00000583078 72 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 AL049861.1-201ENST00000603130 150 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 AC242498.1-201ENST00000604134 111 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
VPS35Q96QK1 MIR367-201ENST00000362299 68 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 RNU4-90P-201ENST00000362773 141 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 RNU6-1138P-201ENST00000365359 106 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 Y_RNA.494-201ENST00000384432 111 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 Y_RNA.569-201ENST00000384749 103 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 RNA5SP496-201ENST00000391240 109 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.37□□□□□ -2.35
VPS35Q96QK1 AC091959.1-201ENST00000495857 238 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 MTND3P22-201ENST00000510932 243 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 SNORA18.4-201ENST00000516440 124 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 AC013791.1-201ENST00000616619 62 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 uc_338.22-201ENST00000622722 187 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 AC090574.1-201ENST00000623186 233 ntBASIC0.37□□□□□ -2.35
VPS35Q96QK1 Y_RNA.183-201ENST00000363882 113 ntBASIC0.36□□□□□ -2.35
VPS35Q96QK1 SNORA63C-201ENST00000364578 129 ntBASIC0.36□□□□□ -2.35
VPS35Q96QK1 SNORA63.7-201ENST00000365579 123 ntBASIC0.36□□□□□ -2.35
VPS35Q96QK1 BTF3P11-201ENST00000426582 477 ntBASIC0.36□□□□□ -2.35
VPS35Q96QK1 MTCO2P12-201ENST00000427426 682 ntBASIC0.36□□□□□ -2.35
VPS35Q96QK1 MTND4P19-201ENST00000446659 478 ntBASIC0.36□□□□□ -2.35
VPS35Q96QK1 Y_RNA.639-201ENST00000458981 102 ntBASIC0.36□□□□□ -2.35
VPS35Q96QK1 Y_RNA.637-201ENST00000459424 114 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms