Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 Pinc.1-201ENST00000616452 154 ntBASIC0.63□□□□□ -2.31
LINC00477Q96M19 uc_338.4-201ENST00000616635 176 ntBASIC0.63□□□□□ -2.31
LINC00477Q96M19 AC008133.2-201ENST00000624540 351 ntBASIC0.63□□□□□ -2.31
LINC00477Q96M19 AC023934.1-201ENST00000574529 2389 ntBASIC0.63□□□□□ -2.31
LINC00477Q96M19 MIR103A2-201ENST00000362154 78 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 RNU6-1309P-201ENST00000363305 108 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 SNORD45.3-201ENST00000363836 72 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 SNORD114-24-201ENST00000365029 72 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 Y_RNA.338-201ENST00000365320 114 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 RNU6-442P-201ENST00000383968 104 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 MIR518F-201ENST00000384973 87 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 Y_RNA.587-201ENST00000391210 103 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 AL358176.2-201ENST00000425769 204 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.62□□□□□ -2.31
LINC00477Q96M19 SNORD2.1-201ENST00000458762 69 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 SNORD77.4-201ENST00000516158 81 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 RNU6-830P-201ENST00000516353 107 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 AL117187.1-201ENST00000555482 181 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.62□□□□□ -2.31
LINC00477Q96M19 AC131055.1-201ENST00000584626 316 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 AL357312.1-201ENST00000603879 298 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 U2.14-201ENST00000615943 113 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 MTND1P7-201ENST00000632801 297 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 MIR4251-201ENST00000635819 61 ntBASIC0.62□□□□□ -2.31
LINC00477Q96M19 RNU6-369P-201ENST00000362515 102 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 Y_RNA.44-201ENST00000362676 108 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 Y_RNA.47-201ENST00000362697 108 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 SNORD61-201ENST00000384252 73 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 RNU6-574P-201ENST00000384265 107 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 Y_RNA.518-201ENST00000384552 113 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 MIR626-201ENST00000385032 94 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 MIR100-201ENST00000385259 80 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 SNORA53-201ENST00000391141 249 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 MIR548O-201ENST00000408583 114 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 RNU6-1190P-201ENST00000410811 104 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 HMGN2P32-201ENST00000444648 269 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 TRMT112P2-201ENST00000512910 132 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 ACA64.5-201ENST00000516207 127 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 SNORD36C-201ENST00000516733 66 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 RNU6-1270P-201ENST00000517128 108 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 AC036111.3-201ENST00000526389 112 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 MIR3973-201ENST00000579824 107 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 FAM71BP1-201ENST00000604431 523 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 AL359821.1-201ENST00000605519 182 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 MIR4791-201ENST00000607666 84 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 Y_RNA.812-201ENST00000610788 101 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 Y_RNA.784-201ENST00000613803 101 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 Y_RNA.787-201ENST00000616522 101 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 Y_RNA.780-201ENST00000617336 101 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 Y_RNA.801-201ENST00000619005 101 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 MIR6866-201ENST00000638146 69 ntBASIC0.61□□□□□ -2.31
LINC00477Q96M19 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LINC00477Q96M19 RNU6-653P-201ENST00000363074 106 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 Y_RNA.122-201ENST00000363331 96 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 Y_RNA.133-201ENST00000363428 110 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 Y_RNA.277-201ENST00000364754 102 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 Y_RNA.416-201ENST00000384014 113 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 RNU6-484P-201ENST00000384016 107 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 SNORA80D-201ENST00000384488 135 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 RNU6-125P-201ENST00000384505 107 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 MIR200A-201ENST00000384875 90 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 RNU6-913P-201ENST00000390913 95 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 MTND2P23-201ENST00000422990 651 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 AL035398.1-201ENST00000430869 322 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 HMGN1P33-201ENST00000432945 451 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 SNRPGP8-201ENST00000454064 226 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 RPL39P39-201ENST00000455840 151 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 PSMC1P5-201ENST00000512850 177 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 RNU7-43P-201ENST00000516554 64 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 AC109810.1-201ENST00000534066 224 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 MIR4724-201ENST00000579485 89 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
LINC00477Q96M19 SEPT14P17-201ENST00000617978 177 ntBASIC0.6□□□□□ -2.31
LINC00477Q96M19 MIR367-201ENST00000362299 68 ntBASIC0.59□□□□□ -2.31
LINC00477Q96M19 Y_RNA.66-201ENST00000362862 102 ntBASIC0.59□□□□□ -2.31
LINC00477Q96M19 RNU6-1138P-201ENST00000365359 106 ntBASIC0.59□□□□□ -2.31
LINC00477Q96M19 RNU6-144P-201ENST00000383951 107 ntBASIC0.59□□□□□ -2.31
LINC00477Q96M19 RNU6-514P-201ENST00000384208 107 ntBASIC0.59□□□□□ -2.31
LINC00477Q96M19 Y_RNA.539-201ENST00000384635 107 ntBASIC0.59□□□□□ -2.31
LINC00477Q96M19 MIR608-201ENST00000384820 100 ntBASIC0.59□□□□□ -2.31
LINC00477Q96M19 Y_RNA.622-201ENST00000411091 108 ntBASIC0.59□□□□□ -2.31
LINC00477Q96M19 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.59□□□□□ -2.31
LINC00477Q96M19 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC00477Q96M19 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.59□□□□□ -2.31
LINC00477Q96M19 SNORA18.4-201ENST00000516440 124 ntBASIC0.59□□□□□ -2.31
LINC00477Q96M19 MIR4282-201ENST00000583613 67 ntBASIC0.59□□□□□ -2.31
LINC00477Q96M19 Y_RNA.802-201ENST00000614892 130 ntBASIC0.59□□□□□ -2.31
LINC00477Q96M19 AL365265.1-201ENST00000621045 234 ntBASIC0.59□□□□□ -2.31
LINC00477Q96M19 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.59□□□□□ -2.32
LINC00477Q96M19 RNA5SP432-201ENST00000362480 116 ntBASIC0.58□□□□□ -2.32
LINC00477Q96M19 Y_RNA.23-201ENST00000362496 106 ntBASIC0.58□□□□□ -2.32
LINC00477Q96M19 Y_RNA.82-201ENST00000363000 102 ntBASIC0.58□□□□□ -2.32
LINC00477Q96M19 Y_RNA.92-201ENST00000363043 102 ntBASIC0.58□□□□□ -2.32
LINC00477Q96M19 Y_RNA.235-201ENST00000364412 102 ntBASIC0.58□□□□□ -2.32
LINC00477Q96M19 RNU6-392P-201ENST00000364926 101 ntBASIC0.58□□□□□ -2.32
LINC00477Q96M19 Y_RNA.306-201ENST00000365015 102 ntBASIC0.58□□□□□ -2.32
LINC00477Q96M19 Y_RNA.312-201ENST00000365089 102 ntBASIC0.58□□□□□ -2.32
LINC00477Q96M19 Y_RNA.322-201ENST00000365151 102 ntBASIC0.58□□□□□ -2.32
LINC00477Q96M19 SNORA1-201ENST00000384107 130 ntBASIC0.58□□□□□ -2.32
LINC00477Q96M19 Y_RNA.459-201ENST00000384251 102 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms