Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 SNORD115-10-201ENST00000365073 81 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 RNY3-201ENST00000365484 102 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-43-201ENST00000365503 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-36-201ENST00000365629 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.384-201ENST00000383909 102 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.466-201ENST00000384294 113 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.494-201ENST00000384432 111 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 MIR518A1-201ENST00000385068 85 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 RNU6-679P-201ENST00000391003 106 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD100-201ENST00000408573 76 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 AL160004.2-201ENST00000432935 350 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 AC236972.2-201ENST00000434979 310 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 POLR2KP2-201ENST00000438155 177 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 MIR18B-201ENST00000454574 71 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 RNU7-67P-201ENST00000459003 62 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 U8.20-201ENST00000459445 131 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORA25.12-201ENST00000516202 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORA18.4-201ENST00000516440 124 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORA62.5-201ENST00000516634 120 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 RNU4-77P-201ENST00000516692 156 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORA20.3-201ENST00000516880 132 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 SNORD115-40-201ENST00000606510 82 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
PKNOX2Q96KN3 MIR103A1-201ENST00000362165 78 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 RNU6-1115P-201ENST00000362490 106 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 SNORD44.1-201ENST00000363202 61 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.143-201ENST00000363520 106 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.187-201ENST00000363918 113 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 RNU6-899P-201ENST00000363947 107 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.241-201ENST00000364470 117 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 RNA5SP517-201ENST00000364724 117 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 SNORA40.8-201ENST00000411034 126 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 MTND1P14-201ENST00000427400 950 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 AC023449.1-201ENST00000454464 154 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 RNU7-152P-201ENST00000458982 64 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 SEPT14P8-201ENST00000508026 178 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 RNU6-1170P-201ENST00000515974 106 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 SNORD113-5-201ENST00000607261 78 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 uc_338.6-201ENST00000613544 171 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 AL606534.2-204ENST00000635008 178 ntBASIC0.17□□□□□ -2.38
PKNOX2Q96KN3 Y_RNA.142-201ENST00000363491 102 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 SNORD114-26-201ENST00000363543 72 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 RNU1-115P-201ENST00000365329 160 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 RNU6-144P-201ENST00000383951 107 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 SNORD38B-201ENST00000384690 67 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 AC138393.2-201ENST00000414742 246 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 SNRPGP12-201ENST00000449481 213 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 RNU7-73P-201ENST00000458743 63 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 RNU7-149P-201ENST00000516739 59 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 AC022523.2-201ENST00000561045 150 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 MIR1273G-201ENST00000577677 100 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 AC090897.1-201ENST00000580909 226 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 MIR4514-201ENST00000581410 57 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 MIR8055-201ENST00000610739 97 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 AC084781.2-201ENST00000615568 161 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 MIR6740-201ENST00000618268 113 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 AC104985.2-201ENST00000620598 500 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 AC139792.2-201ENST00000624218 587 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 SNORD38B-202ENST00000625943 69 ntBASIC0.16□□□□□ -2.38
PKNOX2Q96KN3 AC010332.2-201ENST00000613083 1904 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 Y_RNA.252-201ENST00000364556 101 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 Y_RNA.286-201ENST00000364813 102 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 Y_RNA.526-201ENST00000384572 110 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 SNORD71-201ENST00000411292 86 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 AC087499.4-201ENST00000448505 178 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 RNU6-191P-201ENST00000516295 94 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 RNA5SP94-201ENST00000516917 108 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 RNU6-958P-201ENST00000516995 106 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 AP000942.4-201ENST00000604811 241 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 SNORD58B-201ENST00000607313 66 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 Z97988.1-201ENST00000637697 135 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 MIR1302-1-201ENST00000637932 143 ntBASIC0.15□□□□□ -2.39
PKNOX2Q96KN3 RNU6-1138P-201ENST00000365359 106 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-716P-201ENST00000365621 103 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 MIR125B2-201ENST00000385128 89 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-1319P-201ENST00000390855 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-747P-201ENST00000390928 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-308P-201ENST00000390957 107 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-241P-201ENST00000391148 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-447P-201ENST00000410293 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-1118P-201ENST00000410382 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-1076P-201ENST00000410397 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-355P-201ENST00000410427 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-791P-201ENST00000410467 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-705P-201ENST00000410601 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-1100P-201ENST00000410691 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU2-70P-201ENST00000410718 179 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-860P-201ENST00000410860 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-1217P-201ENST00000411276 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU6-785P-201ENST00000411324 104 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 RNU7-102P-201ENST00000458948 62 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 Y_RNA.661-201ENST00000516003 99 ntBASIC0.14□□□□□ -2.39
PKNOX2Q96KN3 MIR4431-201ENST00000579990 94 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms