Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNU6-958P-201ENST00000516995 106 ntBASIC0.13□□□□□ -2.39
USP47Q96K76 RNU6-699P-201ENST00000517081 110 ntBASIC0.13□□□□□ -2.39
USP47Q96K76 MIR4768-201ENST00000585270 74 ntBASIC0.13□□□□□ -2.39
USP47Q96K76 Y_RNA.772-201ENST00000606692 102 ntBASIC0.13□□□□□ -2.39
USP47Q96K76 Y_RNA.166-201ENST00000363730 102 ntBASIC0.12□□□□□ -2.39
USP47Q96K76 Y_RNA.279-201ENST00000364763 95 ntBASIC0.12□□□□□ -2.39
USP47Q96K76 SNORD81.2-201ENST00000365153 76 ntBASIC0.12□□□□□ -2.39
USP47Q96K76 Y_RNA.547-201ENST00000384654 119 ntBASIC0.12□□□□□ -2.39
USP47Q96K76 MIR559-201ENST00000385188 96 ntBASIC0.12□□□□□ -2.39
USP47Q96K76 BTF3P11-201ENST00000426582 477 ntBASIC0.12□□□□□ -2.39
USP47Q96K76 SNORD11-201ENST00000459124 84 ntBASIC0.12□□□□□ -2.39
USP47Q96K76 RNU6-559P-201ENST00000516151 98 ntBASIC0.12□□□□□ -2.39
USP47Q96K76 AL355297.3-201ENST00000604082 446 ntBASIC0.12□□□□□ -2.39
USP47Q96K76 AC010205.1-201ENST00000616668 449 ntBASIC0.12□□□□□ -2.39
USP47Q96K76 AC022306.2-201ENST00000617563 647 ntBASIC0.12□□□□□ -2.39
USP47Q96K76 RNU6-364P-201ENST00000384387 107 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 SNORD38B-201ENST00000384690 67 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-1319P-201ENST00000390855 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-747P-201ENST00000390928 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-241P-201ENST00000391148 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 SNORD100-201ENST00000408573 76 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-447P-201ENST00000410293 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-1118P-201ENST00000410382 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-1076P-201ENST00000410397 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-355P-201ENST00000410427 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-791P-201ENST00000410467 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-705P-201ENST00000410601 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-1100P-201ENST00000410691 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-860P-201ENST00000410860 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-1217P-201ENST00000411276 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU6-785P-201ENST00000411324 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 FCF1P9-201ENST00000412546 282 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 AC091959.1-201ENST00000495857 238 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNU7-25P-201ENST00000516544 62 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 RNA5SP94-201ENST00000516917 108 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.11□□□□□ -2.39
USP47Q96K76 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 AC008608.1-201ENST00000603910 127 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 uc_338.6-201ENST00000613544 171 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 U6.90-201ENST00000614007 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 AC134878.1-201ENST00000619901 243 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 U6.70-201ENST00000620287 104 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 SNORD38B-202ENST00000625943 69 ntBASIC0.11□□□□□ -2.39
USP47Q96K76 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.1□□□□□ -2.39
USP47Q96K76 RNU6-801P-201ENST00000364087 105 ntBASIC0.1□□□□□ -2.39
USP47Q96K76 RNU4-30P-201ENST00000410245 143 ntBASIC0.1□□□□□ -2.39
USP47Q96K76 MIR18B-201ENST00000454574 71 ntBASIC0.1□□□□□ -2.39
USP47Q96K76 AC090897.1-201ENST00000580909 226 ntBASIC0.1□□□□□ -2.39
USP47Q96K76 SNORA25.18-201ENST00000607153 114 ntBASIC0.1□□□□□ -2.39
USP47Q96K76 AC093783.1-201ENST00000612976 329 ntBASIC0.1□□□□□ -2.39
USP47Q96K76 AC133104.2-201ENST00000615272 193 ntBASIC0.1□□□□□ -2.39
USP47Q96K76 AC010332.2-201ENST00000613083 1904 ntBASIC0.1□□□□□ -2.39
USP47Q96K76 Y_RNA.241-201ENST00000364470 117 ntBASIC0.09□□□□□ -2.39
USP47Q96K76 SNORA24-201ENST00000384096 131 ntBASIC0.09□□□□□ -2.39
USP47Q96K76 MIR125B2-201ENST00000385128 89 ntBASIC0.09□□□□□ -2.39
USP47Q96K76 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.39
USP47Q96K76 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.09□□□□□ -2.39
USP47Q96K76 RNU7-102P-201ENST00000458948 62 ntBASIC0.09□□□□□ -2.39
USP47Q96K76 SNORA18.4-201ENST00000516440 124 ntBASIC0.09□□□□□ -2.39
USP47Q96K76 AC113139.1-201ENST00000605049 239 ntBASIC0.09□□□□□ -2.39
USP47Q96K76 MIR6740-201ENST00000618268 113 ntBASIC0.09□□□□□ -2.39
USP47Q96K76 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.39
USP47Q96K76 SNORA63C-201ENST00000364578 129 ntBASIC0.08□□□□□ -2.4
USP47Q96K76 RNU6-815P-201ENST00000384080 113 ntBASIC0.08□□□□□ -2.4
USP47Q96K76 MT-TL1-201ENST00000386347 75 ntBASIC0.08□□□□□ -2.4
USP47Q96K76 RNU6-876P-201ENST00000391295 104 ntBASIC0.08□□□□□ -2.4
USP47Q96K76 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.08□□□□□ -2.4
USP47Q96K76 MIR548O-201ENST00000408583 114 ntBASIC0.08□□□□□ -2.4
USP47Q96K76 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.08□□□□□ -2.4
USP47Q96K76 MIR4667-201ENST00000578933 66 ntBASIC0.08□□□□□ -2.4
USP47Q96K76 MIR4431-201ENST00000579990 94 ntBASIC0.08□□□□□ -2.4
USP47Q96K76 AC005357.1-201ENST00000588399 301 ntBASIC0.08□□□□□ -2.4
USP47Q96K76 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.08□□□□□ -2.4
USP47Q96K76 AC078938.1-201ENST00000620993 318 ntBASIC0.08□□□□□ -2.4
USP47Q96K76 uc_338.16-201ENST00000621804 95 ntBASIC0.08□□□□□ -2.4
USP47Q96K76 MTND4LP32-201ENST00000636111 270 ntBASIC0.08□□□□□ -2.4
USP47Q96K76 SNORD118-201ENST00000363593 134 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 Y_RNA.303-201ENST00000364998 94 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 RNA5SP117-201ENST00000365294 118 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 Y_RNA.383-201ENST00000383855 97 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 SNORA72.4-201ENST00000384174 132 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 RNU6-937P-201ENST00000384325 106 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 Y_RNA.474-201ENST00000384341 102 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 RNU6-21P-201ENST00000384710 107 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 MIR588-201ENST00000384900 83 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 AL022718.1-201ENST00000412004 84 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 AC073261.1-201ENST00000429409 121 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 AC023449.1-201ENST00000454464 154 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 RNU7-185P-201ENST00000459215 60 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 AC010655.3-201ENST00000478818 450 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 RNU7-156P-201ENST00000517214 74 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 MIR3678-201ENST00000578455 94 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 MIR8055-201ENST00000610739 97 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 AC025253.1-201ENST00000613623 543 ntBASIC0.07□□□□□ -2.4
USP47Q96K76 RNU6-923P-201ENST00000364753 107 ntBASIC0.06□□□□□ -2.4
USP47Q96K76 Y_RNA.428-201ENST00000384078 102 ntBASIC0.06□□□□□ -2.4
USP47Q96K76 Y_RNA.551-201ENST00000384661 102 ntBASIC0.06□□□□□ -2.4
USP47Q96K76 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.06□□□□□ -2.4
USP47Q96K76 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.06□□□□□ -2.4
USP47Q96K76 AC022140.2-201ENST00000623500 188 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 252.4 ms