Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 Y_RNA.410-201ENST00000383992 113 ntBASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 Y_RNA.547-201ENST00000384654 119 ntBASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 MIR194-1-201ENST00000384892 85 ntBASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 RNA5SP127-201ENST00000411051 133 ntBASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 RNU6-346P-201ENST00000516288 111 ntBASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 RNU6-830P-201ENST00000516353 107 ntBASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 RNU6-295P-201ENST00000516901 104 ntBASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 MIR3129-201ENST00000581095 76 ntBASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 MIR6845-201ENST00000613182 61 ntBASIC1.72□□□□□ -2.13
CTHRC1Q96CG8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.71□□□□□ -2.14
CTHRC1Q96CG8 RNU6-1292P-201ENST00000383856 107 ntBASIC1.71□□□□□ -2.14
CTHRC1Q96CG8 RNU6-439P-201ENST00000384188 106 ntBASIC1.71□□□□□ -2.14
CTHRC1Q96CG8 MIR518F-201ENST00000384973 87 ntBASIC1.71□□□□□ -2.14
CTHRC1Q96CG8 HMGN2P19-201ENST00000425149 265 ntBASIC1.71□□□□□ -2.14
CTHRC1Q96CG8 AC087499.4-201ENST00000448505 178 ntBASIC1.71□□□□□ -2.14
CTHRC1Q96CG8 AC007751.1-201ENST00000529260 376 ntBASIC1.71□□□□□ -2.14
CTHRC1Q96CG8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.71□□□□□ -2.14
CTHRC1Q96CG8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CTHRC1Q96CG8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CTHRC1Q96CG8 RNU6-457P-201ENST00000363999 107 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 RNU6-1082P-201ENST00000364574 107 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 SNORA16.1-201ENST00000364597 132 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 SNORA2.2-201ENST00000365473 135 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 RNA5SP259-201ENST00000365541 109 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 SNORA1-201ENST00000384107 130 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 MIR583-201ENST00000384846 75 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 MIR548A2-201ENST00000384956 97 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 MIR513A1-201ENST00000385138 129 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 MIR516B2-201ENST00000385190 85 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 MIR624-201ENST00000385217 97 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 MIR613-201ENST00000385248 95 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 AL392103.1-201ENST00000447000 198 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 RPS29P11-201ENST00000496507 171 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 AC015712.3-201ENST00000559380 164 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 AC095038.3-201ENST00000634439 195 ntBASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CTHRC1Q96CG8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CTHRC1Q96CG8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CTHRC1Q96CG8 SNORD18B-201ENST00000365659 72 ntBASIC1.69□□□□□ -2.14
CTHRC1Q96CG8 AL161935.2-201ENST00000414627 60 ntBASIC1.69□□□□□ -2.14
CTHRC1Q96CG8 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
CTHRC1Q96CG8 AF228730.3-201ENST00000436691 102 ntBASIC1.69□□□□□ -2.14
CTHRC1Q96CG8 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
CTHRC1Q96CG8 RNU6-322P-201ENST00000516010 103 ntBASIC1.69□□□□□ -2.14
CTHRC1Q96CG8 AC131055.1-201ENST00000584626 316 ntBASIC1.69□□□□□ -2.14
CTHRC1Q96CG8 FAM106DP-201ENST00000586416 501 ntBASIC1.69□□□□□ -2.14
CTHRC1Q96CG8 AC103810.8-201ENST00000607347 118 ntBASIC1.69□□□□□ -2.14
CTHRC1Q96CG8 AC106754.2-201ENST00000623006 233 ntBASIC1.69□□□□□ -2.14
CTHRC1Q96CG8 Y_RNA.37-201ENST00000362606 108 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 SNORA1.2-201ENST00000365189 134 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 SNORD50.2-201ENST00000365465 70 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 RNU6-1189P-201ENST00000383958 107 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 MIR30A-201ENST00000385092 71 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 Y_RNA.584-201ENST00000391090 114 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 SNORD77.3-201ENST00000391113 65 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 CYCSP49-201ENST00000420810 319 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 HMGN2P23-201ENST00000456759 269 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 snoU13.9-201ENST00000458927 103 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 AC107297.1-201ENST00000459991 176 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 AC108210.2-201ENST00000503681 201 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 SNORA25.12-201ENST00000516202 82 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 SNORA77B-201ENST00000578179 125 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 AP001485.1-201ENST00000604799 199 ntBASIC1.68□□□□□ -2.14
CTHRC1Q96CG8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CTHRC1Q96CG8 RNU6-1336P-201ENST00000383886 109 ntBASIC1.67□□□□□ -2.14
CTHRC1Q96CG8 RNU6-187P-201ENST00000384139 106 ntBASIC1.67□□□□□ -2.14
CTHRC1Q96CG8 Y_RNA.497-201ENST00000384447 98 ntBASIC1.67□□□□□ -2.14
CTHRC1Q96CG8 RNU6-1067P-201ENST00000384752 107 ntBASIC1.67□□□□□ -2.14
CTHRC1Q96CG8 SNORA40.18-201ENST00000391200 128 ntBASIC1.67□□□□□ -2.14
CTHRC1Q96CG8 U8.17-201ENST00000391292 132 ntBASIC1.67□□□□□ -2.14
CTHRC1Q96CG8 RN7SL274P-201ENST00000492268 272 ntBASIC1.67□□□□□ -2.14
CTHRC1Q96CG8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.67□□□□□ -2.14
CTHRC1Q96CG8 MIR3198-2-201ENST00000577868 80 ntBASIC1.67□□□□□ -2.14
CTHRC1Q96CG8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.67□□□□□ -2.14
CTHRC1Q96CG8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CTHRC1Q96CG8 MIR526A1-201ENST00000384897 85 ntBASIC1.66□□□□□ -2.14
CTHRC1Q96CG8 MIR569-201ENST00000385228 96 ntBASIC1.66□□□□□ -2.14
CTHRC1Q96CG8 RNU6-482P-201ENST00000391068 107 ntBASIC1.66□□□□□ -2.14
CTHRC1Q96CG8 RPL31P63-201ENST00000422565 375 ntBASIC1.66□□□□□ -2.14
CTHRC1Q96CG8 RNU4-57P-201ENST00000515980 135 ntBASIC1.66□□□□□ -2.14
CTHRC1Q96CG8 SNORA18.7-201ENST00000516910 131 ntBASIC1.66□□□□□ -2.14
CTHRC1Q96CG8 AP003484.1-201ENST00000530974 250 ntBASIC1.66□□□□□ -2.14
CTHRC1Q96CG8 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
CTHRC1Q96CG8 WWP1P1-201ENST00000466609 2769 ntBASIC1.65□□□□□ -2.14
CTHRC1Q96CG8 AP000648.3-201ENST00000623539 4507 ntBASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 RNU6-704P-201ENST00000364162 103 ntBASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.568-201ENST00000384742 113 ntBASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 SNORA40.5-201ENST00000391061 128 ntBASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 AL451046.2-201ENST00000403074 277 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 288.4 ms