Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 Y_RNA.527-201ENST00000384573 102 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 Y_RNA.537-201ENST00000384626 109 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 MIR548O-201ENST00000408583 114 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 SNORD83.1-201ENST00000411362 77 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 MTND4LP11-201ENST00000422184 280 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 BTF3P11-201ENST00000426582 477 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 AC091959.1-201ENST00000495857 238 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 RNU6-1137P-201ENST00000517073 99 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 MIR5000-201ENST00000577717 103 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 AL008718.3-201ENST00000610217 321 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 uc_338.4-201ENST00000616635 176 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 AC243994.1-201ENST00000618627 109 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 AL160413.1-201ENST00000622780 310 ntBASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RTN4IP1Q8WWV3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 Y_RNA.64-201ENST00000362845 102 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 RNU6-290P-201ENST00000365212 101 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 SNORA63.7-201ENST00000365579 123 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 RNU6-110P-201ENST00000384508 104 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 RNU6-1248P-201ENST00000391096 64 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 RNU6-101P-201ENST00000410323 104 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 AC244023.1-201ENST00000426884 112 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 Y_RNA.631-201ENST00000459607 101 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 MIR2115-201ENST00000516657 100 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 AC131281.1-201ENST00000522984 164 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 MIR5692C2-201ENST00000577959 77 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 AC242498.1-201ENST00000604134 111 ntBASIC0.42□□□□□ -2.34
RTN4IP1Q8WWV3 Y_RNA.210-201ENST00000364161 110 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 Y_RNA.293-201ENST00000364908 93 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 RNU6-396P-201ENST00000365369 105 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 Y_RNA.486-201ENST00000384398 107 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 MIR548A2-201ENST00000384956 97 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 SNORD105-201ENST00000386910 85 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 RNU6-913P-201ENST00000390913 95 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 RNU1-119P-201ENST00000391122 165 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 RNU6-847P-201ENST00000411115 108 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 RNU6-938P-201ENST00000411285 103 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 AC067940.1-201ENST00000458411 300 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 RNY3P15-201ENST00000516297 97 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 RNA5SP121-201ENST00000516537 101 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 snoU18.1-201ENST00000629629 71 ntBASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
RTN4IP1Q8WWV3 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.19-201ENST00000362462 99 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-770P-201ENST00000363929 105 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 RNA5SP499-201ENST00000363982 119 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.217-201ENST00000364214 105 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-580P-201ENST00000365159 107 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.380-201ENST00000365663 111 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-144P-201ENST00000383951 107 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.431-201ENST00000384086 102 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 RNA5SP222-201ENST00000411039 105 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 AC022028.1-201ENST00000412054 408 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.641-201ENST00000459414 105 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 RNU2-31P-201ENST00000516954 155 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.711-201ENST00000516993 102 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 AC113195.1-201ENST00000579952 141 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 AC025627.3-201ENST00000582078 182 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 AL512605.2-201ENST00000592972 256 ntBASIC0.4□□□□□ -2.35
RTN4IP1Q8WWV3 MIR1-1-201ENST00000362147 71 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 MIR367-201ENST00000362299 68 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.153-201ENST00000363615 91 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.241-201ENST00000364470 117 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 RNU5E-4P-201ENST00000364931 120 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.535-201ENST00000384612 99 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 MIR518F-201ENST00000384973 87 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 HMGN1P33-201ENST00000432945 451 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 AC092628.1-201ENST00000436250 252 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 MTCO2P24-201ENST00000515611 426 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD77.4-201ENST00000516158 81 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 SNORA18.4-201ENST00000516440 124 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 SNORA40.15-201ENST00000516884 107 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-958P-201ENST00000516995 106 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-988P-201ENST00000519081 107 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 AC020661.2-201ENST00000560114 134 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 MIR4680-201ENST00000580906 66 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 AL078603.1-201ENST00000603824 313 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 AL355297.3-201ENST00000604082 446 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 AC020891.4-201ENST00000605745 93 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 RMST_2.1-201ENST00000617263 136 ntBASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
RTN4IP1Q8WWV3 SNORA25.1-201ENST00000362326 128 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.61-201ENST00000362835 102 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.117-201ENST00000363294 101 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-867P-201ENST00000364956 107 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-934P-201ENST00000365154 107 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 SNORA1.2-201ENST00000365189 134 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-1138P-201ENST00000365359 106 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms