Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 SNORD115-10-201ENST00000365073 81 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-43-201ENST00000365503 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-36-201ENST00000365629 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 RNU6-514P-201ENST00000384208 107 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 MT-TF-201ENST00000387314 71 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 RNU2-16P-201ENST00000410712 136 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 MTND1P2-201ENST00000430604 821 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 RPS3AP52-201ENST00000435639 297 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 RNU6-469P-201ENST00000516253 101 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-40-201ENST00000606510 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 RNU6-929P-201ENST00000384429 107 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 MIR760-201ENST00000390220 80 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 SNORA26-201ENST00000391286 122 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 FCF1P9-201ENST00000412546 282 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 RNU6-437P-201ENST00000459408 95 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 PRDX4P1-201ENST00000507189 574 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 RNU6-506P-201ENST00000516553 94 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 RNU6-314P-201ENST00000516574 104 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 AC063944.3-201ENST00000609969 533 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 AC011476.5-201ENST00000615594 130 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 AC015540.1-201ENST00000615828 501 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 uc_338.22-201ENST00000622722 187 ntBASIC-0.31□□□□□ -2.46
CCDC112Q8NEF3 RNY4P14-201ENST00000363656 96 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 RNA5SP128-201ENST00000365305 116 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 SNORA8.3-201ENST00000384679 139 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 SNORD78.2-201ENST00000391076 69 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 SNORA75.4-201ENST00000391278 119 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 MIR548F5-201ENST00000408421 86 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 RNA5SP118-201ENST00000410385 109 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 RPS29P25-201ENST00000481709 171 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 RNA5SP47-201ENST00000517230 109 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 RN7SKP295-201ENST00000517264 153 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 AP000942.4-201ENST00000604811 241 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 MIR1295B-201ENST00000636144 60 ntBASIC-0.32□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 SNORD12C-201ENST00000386307 89 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 MIR548O-201ENST00000408583 114 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 SUMO1P3-201ENST00000439961 304 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 RNU7-129P-201ENST00000516128 62 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 RNA5SP476-201ENST00000516613 103 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 RNU6-782P-201ENST00000516852 104 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 MIR4659A-201ENST00000580269 81 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 MIR499B-201ENST00000636498 73 ntBASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.33□□□□□ -2.46
CCDC112Q8NEF3 SNORD81.1-201ENST00000363064 77 ntBASIC-0.34□□□□□ -2.46
CCDC112Q8NEF3 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.34□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.34□□□□□ -2.46
CCDC112Q8NEF3 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.34□□□□□ -2.46
CCDC112Q8NEF3 SNORA36B-201ENST00000410438 131 ntBASIC-0.34□□□□□ -2.46
CCDC112Q8NEF3 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.34□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.34□□□□□ -2.46
CCDC112Q8NEF3 DEFB117-201ENST00000602356 141 ntBASIC-0.34□□□□□ -2.46
CCDC112Q8NEF3 AL360085.1-201ENST00000604713 532 ntBASIC-0.34□□□□□ -2.46
CCDC112Q8NEF3 AL080274.1-201ENST00000605565 220 ntBASIC-0.34□□□□□ -2.46
CCDC112Q8NEF3 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.34□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 SNORD115-47-201ENST00000391226 86 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 RNU4-83P-201ENST00000410863 133 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 Z95118.1-201ENST00000421372 247 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 MTCO1P5-201ENST00000433573 344 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 RPL39P34-201ENST00000477141 156 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 RNU6-120P-201ENST00000516077 103 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 SNORA31.14-201ENST00000516728 116 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 RNU6-307P-201ENST00000516743 106 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 AC131281.1-201ENST00000522984 164 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 AC007751.1-201ENST00000529260 376 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 RNU1-29P-201ENST00000606574 126 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 AC022140.2-201ENST00000623500 188 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 TPTEP1-208ENST00000636884 213 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 AC091304.10-201ENST00000641554 121 ntBASIC-0.35□□□□□ -2.47
CCDC112Q8NEF3 SNORA1.1-201ENST00000364671 133 ntBASIC-0.36□□□□□ -2.47
CCDC112Q8NEF3 MIR181A1-201ENST00000385026 110 ntBASIC-0.36□□□□□ -2.47
CCDC112Q8NEF3 SNORA40.5-201ENST00000391061 128 ntBASIC-0.36□□□□□ -2.47
CCDC112Q8NEF3 MIR892B-201ENST00000401279 77 ntBASIC-0.36□□□□□ -2.47
CCDC112Q8NEF3 SNORD93-201ENST00000408813 74 ntBASIC-0.36□□□□□ -2.47
CCDC112Q8NEF3 RNU6-938P-201ENST00000411285 103 ntBASIC-0.36□□□□□ -2.47
CCDC112Q8NEF3 POLR2KP2-201ENST00000438155 177 ntBASIC-0.36□□□□□ -2.47
CCDC112Q8NEF3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.36□□□□□ -2.47
CCDC112Q8NEF3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.36□□□□□ -2.47
CCDC112Q8NEF3 MIR4423-201ENST00000580922 80 ntBASIC-0.36□□□□□ -2.47
CCDC112Q8NEF3 MIR4645-201ENST00000583158 77 ntBASIC-0.36□□□□□ -2.47
CCDC112Q8NEF3 AP001180.6-201ENST00000584918 159 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms