Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ELOCP32-201ENST00000548625 324 ntBASIC-2.35□□□□□ -2.79
VPS8Q8N3P4 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.35□□□□□ -2.79
VPS8Q8N3P4 AC011373.1-201ENST00000607270 237 ntBASIC-2.35□□□□□ -2.79
VPS8Q8N3P4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-2.35□□□□□ -2.79
VPS8Q8N3P4 RNA5SP245-201ENST00000364239 121 ntBASIC-2.36□□□□□ -2.79
VPS8Q8N3P4 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.36□□□□□ -2.79
VPS8Q8N3P4 RNU6-1317P-201ENST00000364582 104 ntBASIC-2.36□□□□□ -2.79
VPS8Q8N3P4 RNU6-809P-201ENST00000384461 107 ntBASIC-2.36□□□□□ -2.79
VPS8Q8N3P4 Y_RNA.517-201ENST00000384551 106 ntBASIC-2.36□□□□□ -2.79
VPS8Q8N3P4 AL353813.1-201ENST00000440700 253 ntBASIC-2.36□□□□□ -2.79
VPS8Q8N3P4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-2.36□□□□□ -2.79
VPS8Q8N3P4 MTND1P24-201ENST00000552175 861 ntBASIC-2.36□□□□□ -2.79
VPS8Q8N3P4 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.37□□□□□ -2.79
VPS8Q8N3P4 RNU4-61P-201ENST00000411243 107 ntBASIC-2.37□□□□□ -2.79
VPS8Q8N3P4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2.37□□□□□ -2.79
VPS8Q8N3P4 RNA5SP484-201ENST00000458857 111 ntBASIC-2.37□□□□□ -2.79
VPS8Q8N3P4 RNU7-104P-201ENST00000459398 79 ntBASIC-2.37□□□□□ -2.79
VPS8Q8N3P4 MTND4LP18-201ENST00000526864 291 ntBASIC-2.37□□□□□ -2.79
VPS8Q8N3P4 AC090616.2-202ENST00000584248 222 ntBASIC-2.37□□□□□ -2.79
VPS8Q8N3P4 AL356055.1-201ENST00000602528 446 ntBASIC-2.37□□□□□ -2.79
VPS8Q8N3P4 AC018714.1-201ENST00000605028 208 ntBASIC-2.37□□□□□ -2.79
VPS8Q8N3P4 AL391834.2-201ENST00000609982 546 ntBASIC-2.37□□□□□ -2.79
VPS8Q8N3P4 AC087683.2-201ENST00000611384 326 ntBASIC-2.37□□□□□ -2.79
VPS8Q8N3P4 U6.115-201ENST00000636045 103 ntBASIC-2.37□□□□□ -2.79
VPS8Q8N3P4 RNU6-268P-201ENST00000364174 107 ntBASIC-2.38□□□□□ -2.79
VPS8Q8N3P4 SNORD114-29-201ENST00000364819 70 ntBASIC-2.38□□□□□ -2.79
VPS8Q8N3P4 SNORD41.1-201ENST00000391000 69 ntBASIC-2.38□□□□□ -2.79
VPS8Q8N3P4 Y_RNA.588-201ENST00000391254 102 ntBASIC-2.38□□□□□ -2.79
VPS8Q8N3P4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-2.38□□□□□ -2.79
VPS8Q8N3P4 MIR4473-201ENST00000583731 91 ntBASIC-2.38□□□□□ -2.79
VPS8Q8N3P4 SNORD114-7-201ENST00000362520 77 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 SNORD115-12-201ENST00000362583 82 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 SNORD115-9-201ENST00000362912 82 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 SNORD115-19-201ENST00000363098 82 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 SNORD115-18-201ENST00000363293 82 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 SNORD115-17-201ENST00000364612 82 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 SNORD115-20-201ENST00000365099 82 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 RNU6-1062P-201ENST00000383908 107 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 Y_RNA.436-201ENST00000384097 102 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 AC131281.1-201ENST00000522984 164 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 AC005972.2-201ENST00000604690 348 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 AC006386.1-201ENST00000619436 415 ntBASIC-2.39□□□□□ -2.79
VPS8Q8N3P4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-2.4□□□□□ -2.79
VPS8Q8N3P4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-2.4□□□□□ -2.79
VPS8Q8N3P4 RPL30P10-201ENST00000488148 337 ntBASIC-2.4□□□□□ -2.79
VPS8Q8N3P4 RNU6-865P-201ENST00000364772 107 ntBASIC-2.41□□□□□ -2.79
VPS8Q8N3P4 SNORD115.1-201ENST00000391109 76 ntBASIC-2.41□□□□□ -2.79
VPS8Q8N3P4 RNA5SP237-201ENST00000410414 113 ntBASIC-2.41□□□□□ -2.79
VPS8Q8N3P4 RNU7-138P-201ENST00000459479 64 ntBASIC-2.41□□□□□ -2.79
VPS8Q8N3P4 AP003181.2-201ENST00000528941 181 ntBASIC-2.41□□□□□ -2.79
VPS8Q8N3P4 AL158209.2-201ENST00000619266 216 ntBASIC-2.41□□□□□ -2.79
VPS8Q8N3P4 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.42□□□□□ -2.8
VPS8Q8N3P4 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.42□□□□□ -2.8
VPS8Q8N3P4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-2.42□□□□□ -2.8
VPS8Q8N3P4 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-2.42□□□□□ -2.8
VPS8Q8N3P4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.42□□□□□ -2.8
VPS8Q8N3P4 uc_338.11-201ENST00000619132 160 ntBASIC-2.42□□□□□ -2.8
VPS8Q8N3P4 RNU6-973P-201ENST00000364690 107 ntBASIC-2.42□□□□□ -2.8
VPS8Q8N3P4 RNU6-588P-201ENST00000410281 105 ntBASIC-2.42□□□□□ -2.8
VPS8Q8N3P4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-2.42□□□□□ -2.8
VPS8Q8N3P4 SNRPGP14-201ENST00000435400 219 ntBASIC-2.42□□□□□ -2.8
VPS8Q8N3P4 RNU7-161P-201ENST00000517289 62 ntBASIC-2.42□□□□□ -2.8
VPS8Q8N3P4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-2.42□□□□□ -2.8
VPS8Q8N3P4 RNY3P9-201ENST00000384727 106 ntBASIC-2.43□□□□□ -2.8
VPS8Q8N3P4 RNU6-159P-201ENST00000391080 106 ntBASIC-2.43□□□□□ -2.8
VPS8Q8N3P4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.43□□□□□ -2.8
VPS8Q8N3P4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-2.43□□□□□ -2.8
VPS8Q8N3P4 RNU6-757P-201ENST00000410334 100 ntBASIC-2.43□□□□□ -2.8
VPS8Q8N3P4 MTCO3P23-201ENST00000561363 289 ntBASIC-2.43□□□□□ -2.8
VPS8Q8N3P4 UBL5P4-201ENST00000562584 236 ntBASIC-2.43□□□□□ -2.8
VPS8Q8N3P4 AC109347.2-201ENST00000610220 349 ntBASIC-2.43□□□□□ -2.8
VPS8Q8N3P4 AC009248.2-201ENST00000619826 254 ntBASIC-2.43□□□□□ -2.8
VPS8Q8N3P4 Y_RNA.110-201ENST00000363220 99 ntBASIC-2.44□□□□□ -2.8
VPS8Q8N3P4 RNU6-1264P-201ENST00000383891 107 ntBASIC-2.44□□□□□ -2.8
VPS8Q8N3P4 MIR521-1-201ENST00000384902 87 ntBASIC-2.44□□□□□ -2.8
VPS8Q8N3P4 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.44□□□□□ -2.8
VPS8Q8N3P4 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-2.44□□□□□ -2.8
VPS8Q8N3P4 RNU6-437P-201ENST00000459408 95 ntBASIC-2.44□□□□□ -2.8
VPS8Q8N3P4 Y_RNA.637-201ENST00000459424 114 ntBASIC-2.44□□□□□ -2.8
VPS8Q8N3P4 SCARNA24.1-201ENST00000516465 137 ntBASIC-2.44□□□□□ -2.8
VPS8Q8N3P4 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.44□□□□□ -2.8
VPS8Q8N3P4 SEPT14P19-203ENST00000633205 211 ntBASIC-2.44□□□□□ -2.8
VPS8Q8N3P4 RNA5SP405-201ENST00000363059 114 ntBASIC-2.45□□□□□ -2.8
VPS8Q8N3P4 SNORA63.5-201ENST00000363548 123 ntBASIC-2.45□□□□□ -2.8
VPS8Q8N3P4 SNORD115-32-201ENST00000364079 82 ntBASIC-2.45□□□□□ -2.8
VPS8Q8N3P4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-2.45□□□□□ -2.8
VPS8Q8N3P4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-2.45□□□□□ -2.8
VPS8Q8N3P4 Y_RNA.683-201ENST00000516508 93 ntBASIC-2.45□□□□□ -2.8
VPS8Q8N3P4 RNU6-1337P-201ENST00000516525 95 ntBASIC-2.45□□□□□ -2.8
VPS8Q8N3P4 RNU6-913P-201ENST00000390913 95 ntBASIC-2.46□□□□□ -2.8
VPS8Q8N3P4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-2.46□□□□□ -2.8
VPS8Q8N3P4 MIR4775-201ENST00000581168 75 ntBASIC-2.46□□□□□ -2.8
VPS8Q8N3P4 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.47□□□□□ -2.8
VPS8Q8N3P4 Y_RNA.399-201ENST00000383955 105 ntBASIC-2.47□□□□□ -2.8
VPS8Q8N3P4 RPL30P16-201ENST00000419341 429 ntBASIC-2.47□□□□□ -2.8
VPS8Q8N3P4 RNU7-167P-201ENST00000459160 62 ntBASIC-2.47□□□□□ -2.8
VPS8Q8N3P4 AL357078.3-201ENST00000607528 618 ntBASIC-2.47□□□□□ -2.8
VPS8Q8N3P4 AC145423.2-201ENST00000610631 239 ntBASIC-2.47□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms