Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNU6-1007P-201ENST00000516586 107 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 RNU7-149P-201ENST00000516739 59 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 MIR1302-2-201ENST00000607096 138 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 AC006157.1-201ENST00000611750 366 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 AC022709.1-201ENST00000615967 87 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.112-201ENST00000363250 102 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 SNORD113-8-201ENST00000363497 74 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 RNU6-899P-201ENST00000363947 107 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.526-201ENST00000384572 110 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.579-201ENST00000390939 94 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 MIR548O-201ENST00000408583 114 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 RNA5SP193-201ENST00000410353 107 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 RNU6-938P-201ENST00000411285 103 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 snoU13.16-201ENST00000459350 104 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 MIR3612-201ENST00000579753 87 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 MIR4676-201ENST00000583078 72 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 C8orf59P2-201ENST00000603441 271 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 AP000753.3-201ENST00000604083 169 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 MIR8055-201ENST00000610739 97 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 AC122108.2-201ENST00000611946 526 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 uc_338.22-201ENST00000622722 187 ntBASIC0.35□□□□□ -2.35
CCDC65Q8IXS2 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
CCDC65Q8IXS2 Y_RNA.242-201ENST00000364473 110 ntBASIC0.34□□□□□ -2.36
CCDC65Q8IXS2 RNU6-1138P-201ENST00000365359 106 ntBASIC0.34□□□□□ -2.36
CCDC65Q8IXS2 RNU6-144P-201ENST00000383951 107 ntBASIC0.34□□□□□ -2.36
CCDC65Q8IXS2 RNU6-913P-201ENST00000390913 95 ntBASIC0.34□□□□□ -2.36
CCDC65Q8IXS2 MRPS35P2-201ENST00000508242 191 ntBASIC0.34□□□□□ -2.36
CCDC65Q8IXS2 Y_RNA.666-201ENST00000516187 112 ntBASIC0.34□□□□□ -2.36
CCDC65Q8IXS2 RNU6-977P-201ENST00000516411 103 ntBASIC0.34□□□□□ -2.36
CCDC65Q8IXS2 MIR4771-2-201ENST00000577758 74 ntBASIC0.34□□□□□ -2.36
CCDC65Q8IXS2 MIR4771-1-201ENST00000582617 74 ntBASIC0.34□□□□□ -2.36
CCDC65Q8IXS2 Z83818.1-201ENST00000603584 150 ntBASIC0.34□□□□□ -2.36
CCDC65Q8IXS2 MIR6740-201ENST00000618268 113 ntBASIC0.34□□□□□ -2.36
CCDC65Q8IXS2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.33□□□□□ -2.36
CCDC65Q8IXS2 MIR518E-201ENST00000385252 88 ntBASIC0.33□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-46-201ENST00000390982 71 ntBASIC0.33□□□□□ -2.36
CCDC65Q8IXS2 Y_RNA.587-201ENST00000391210 103 ntBASIC0.33□□□□□ -2.36
CCDC65Q8IXS2 Y_RNA.645-201ENST00000391229 102 ntBASIC0.33□□□□□ -2.36
CCDC65Q8IXS2 MTCO1P5-201ENST00000433573 344 ntBASIC0.33□□□□□ -2.36
CCDC65Q8IXS2 AC236972.2-201ENST00000434979 310 ntBASIC0.33□□□□□ -2.36
CCDC65Q8IXS2 RNA5SP436-201ENST00000516020 115 ntBASIC0.33□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-34-201ENST00000362441 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-12-201ENST00000362583 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-29-201ENST00000362834 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-9-201ENST00000362912 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-21-201ENST00000362963 81 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-14-201ENST00000363090 81 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-13-201ENST00000363358 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-41-201ENST00000363608 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-11-201ENST00000363616 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-5-201ENST00000363633 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-39-201ENST00000363694 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-4-201ENST00000363810 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-16-201ENST00000363887 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-6-201ENST00000363942 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-42-201ENST00000364273 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-15-201ENST00000364809 81 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-1-201ENST00000364961 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-26-201ENST00000365067 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-10-201ENST00000365073 81 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 Y_RNA.356-201ENST00000365475 113 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-43-201ENST00000365503 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-36-201ENST00000365629 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 Y_RNA.395-201ENST00000383945 109 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 MIR548A2-201ENST00000384956 97 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 SNORD115-40-201ENST00000606510 82 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 AC013791.1-201ENST00000616619 62 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 AC134878.1-201ENST00000619901 243 ntBASIC0.32□□□□□ -2.36
CCDC65Q8IXS2 Y_RNA.105-201ENST00000363182 111 ntBASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 RNU6-1205P-201ENST00000363625 106 ntBASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 Y_RNA.486-201ENST00000384398 107 ntBASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 RNU6-342P-201ENST00000384521 104 ntBASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 RNU7-73P-201ENST00000458743 63 ntBASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 RNU7-62P-201ENST00000458856 62 ntBASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 SNORA18.4-201ENST00000516440 124 ntBASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 AL049861.1-201ENST00000603130 150 ntBASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 AP000942.4-201ENST00000604811 241 ntBASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 Z97988.1-201ENST00000637697 135 ntBASIC0.31□□□□□ -2.36
CCDC65Q8IXS2 Y_RNA.241-201ENST00000364470 117 ntBASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 MIR518F-201ENST00000384973 87 ntBASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 RNU6-1009P-201ENST00000390996 107 ntBASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 RNA5SP496-201ENST00000391240 109 ntBASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 RNU6-121P-201ENST00000410525 99 ntBASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 Y_RNA.602-201ENST00000410535 92 ntBASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 MTND4P19-201ENST00000446659 478 ntBASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 Y_RNA.639-201ENST00000458981 102 ntBASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 SNORD77.4-201ENST00000516158 81 ntBASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 RNU6-958P-201ENST00000516995 106 ntBASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 AC008608.1-201ENST00000603910 127 ntBASIC0.3□□□□□ -2.36
CCDC65Q8IXS2 AL355297.3-201ENST00000604082 446 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 231.9 ms