Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MIR21-201ENST00000362134 72 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 RNU6-833P-201ENST00000363486 107 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 MIRLET7F2-201ENST00000385277 83 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 RNY4P18-201ENST00000391107 89 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 RNA5SP100-201ENST00000410903 110 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 RNA5SP59-201ENST00000410922 110 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 snoU13.27-201ENST00000459278 104 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 RNA5SP82-201ENST00000516707 92 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 RNU7-70P-201ENST00000516941 66 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 MIR5194-201ENST00000582634 120 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 HSPE1P19-201ENST00000603327 295 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 AL670379.3-201ENST00000605040 251 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 AL137067.1-201ENST00000615933 120 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.22□□□□□ -2.05
TRIM48Q8IWZ4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 Y_RNA.241-201ENST00000364470 117 ntBASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 MIR144-201ENST00000384886 86 ntBASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 AC087499.4-201ENST00000448505 178 ntBASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 AC099513.1-201ENST00000490423 301 ntBASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 MIR1273D-201ENST00000577266 86 ntBASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 MIR3945-201ENST00000581853 98 ntBASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 U1.36-201ENST00000620684 176 ntBASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 MIR6132-201ENST00000622083 109 ntBASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 AL596211.1-201ENST00000569873 2277 ntBASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
TRIM48Q8IWZ4 RNU1-133P-201ENST00000364867 167 ntBASIC2.2□□□□□ -2.06
TRIM48Q8IWZ4 RNU6-690P-201ENST00000365242 106 ntBASIC2.2□□□□□ -2.06
TRIM48Q8IWZ4 Y_RNA.528-201ENST00000384575 108 ntBASIC2.2□□□□□ -2.06
TRIM48Q8IWZ4 RN7SKP223-201ENST00000410582 62 ntBASIC2.2□□□□□ -2.06
TRIM48Q8IWZ4 Y_RNA.649-201ENST00000459077 103 ntBASIC2.2□□□□□ -2.06
TRIM48Q8IWZ4 RNA5SP57-201ENST00000459463 123 ntBASIC2.2□□□□□ -2.06
TRIM48Q8IWZ4 SNORA31.17-201ENST00000516953 127 ntBASIC2.2□□□□□ -2.06
TRIM48Q8IWZ4 MIR4529-201ENST00000578110 78 ntBASIC2.2□□□□□ -2.06
TRIM48Q8IWZ4 MIR6766-201ENST00000622641 72 ntBASIC2.2□□□□□ -2.06
TRIM48Q8IWZ4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.2□□□□□ -2.06
TRIM48Q8IWZ4 RNA5SP276-201ENST00000362580 94 ntBASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 Y_RNA.35-201ENST00000362601 101 ntBASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 Y_RNA.346-201ENST00000365385 112 ntBASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 SNORA22-201ENST00000383907 134 ntBASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 SNORD116-21-201ENST00000384507 92 ntBASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 MIR221-201ENST00000385135 110 ntBASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 RPS26P48-201ENST00000491713 339 ntBASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 RNU6-830P-201ENST00000516353 107 ntBASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 RNU6-113P-201ENST00000516653 101 ntBASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 Y_RNA.709-201ENST00000516952 92 ntBASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 SNORD3E-202ENST00000627253 216 ntBASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TRIM48Q8IWZ4 RNU6-349P-201ENST00000362402 107 ntBASIC2.18□□□□□ -2.06
TRIM48Q8IWZ4 SNORA27-201ENST00000384323 126 ntBASIC2.18□□□□□ -2.06
TRIM48Q8IWZ4 U8.17-201ENST00000391292 132 ntBASIC2.18□□□□□ -2.06
TRIM48Q8IWZ4 MIR1267-201ENST00000408723 78 ntBASIC2.18□□□□□ -2.06
TRIM48Q8IWZ4 PGBD4P5-201ENST00000445958 426 ntBASIC2.18□□□□□ -2.06
TRIM48Q8IWZ4 RNU6-589P-201ENST00000516485 107 ntBASIC2.18□□□□□ -2.06
TRIM48Q8IWZ4 RNA5SP481-201ENST00000516814 122 ntBASIC2.18□□□□□ -2.06
TRIM48Q8IWZ4 AC091932.4-201ENST00000623386 200 ntBASIC2.18□□□□□ -2.06
TRIM48Q8IWZ4 RNU4-16P-201ENST00000364737 141 ntBASIC2.17□□□□□ -2.06
TRIM48Q8IWZ4 SUMO1P4-201ENST00000429430 302 ntBASIC2.17□□□□□ -2.06
TRIM48Q8IWZ4 PDCD5P2-201ENST00000507570 312 ntBASIC2.17□□□□□ -2.06
TRIM48Q8IWZ4 MIR4648-201ENST00000580107 72 ntBASIC2.17□□□□□ -2.06
TRIM48Q8IWZ4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 RNU6-153P-201ENST00000364422 104 ntBASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 RNY1P6-201ENST00000384193 109 ntBASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 MIR526A1-201ENST00000384897 85 ntBASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 MIR452-201ENST00000385020 85 ntBASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 MIR660-201ENST00000385235 97 ntBASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 RNU7-80P-201ENST00000459562 61 ntBASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 RNU2-19P-201ENST00000517288 84 ntBASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 IGLV3-17-201ENST00000519099 244 ntBASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 AC090821.2-201ENST00000523552 176 ntBASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM48Q8IWZ4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
TRIM48Q8IWZ4 RNU6-457P-201ENST00000363999 107 ntBASIC2.15□□□□□ -2.07
TRIM48Q8IWZ4 MIR136-201ENST00000385207 82 ntBASIC2.15□□□□□ -2.07
TRIM48Q8IWZ4 AL627390.1-201ENST00000396055 340 ntBASIC2.15□□□□□ -2.07
TRIM48Q8IWZ4 MIR1261-201ENST00000408659 82 ntBASIC2.15□□□□□ -2.07
TRIM48Q8IWZ4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM48Q8IWZ4 AC055731.1-201ENST00000474387 401 ntBASIC2.15□□□□□ -2.07
TRIM48Q8IWZ4 AC021443.1-201ENST00000604478 211 ntBASIC2.15□□□□□ -2.07
TRIM48Q8IWZ4 AC245884.12-201ENST00000615364 59 ntBASIC2.15□□□□□ -2.07
TRIM48Q8IWZ4 AL513423.1-201ENST00000621695 132 ntBASIC2.15□□□□□ -2.07
TRIM48Q8IWZ4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.15□□□□□ -2.07
TRIM48Q8IWZ4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
TRIM48Q8IWZ4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
TRIM48Q8IWZ4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
TRIM48Q8IWZ4 RNU6-203P-201ENST00000384038 104 ntBASIC2.14□□□□□ -2.07
TRIM48Q8IWZ4 SNORD23.1-201ENST00000408212 104 ntBASIC2.14□□□□□ -2.07
TRIM48Q8IWZ4 RNA5SP136-201ENST00000410906 107 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms