Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 Y_RNA.303-201ENST00000364998 94 ntBASIC0.35□□□□□ -2.35
CDKL3Q8IVW4 RNU6-580P-201ENST00000365159 107 ntBASIC0.35□□□□□ -2.35
CDKL3Q8IVW4 Y_RNA.356-201ENST00000365475 113 ntBASIC0.35□□□□□ -2.35
CDKL3Q8IVW4 RNU6-130P-201ENST00000411112 103 ntBASIC0.35□□□□□ -2.35
CDKL3Q8IVW4 BTF3P11-201ENST00000426582 477 ntBASIC0.35□□□□□ -2.35
CDKL3Q8IVW4 RNU6-191P-201ENST00000516295 94 ntBASIC0.35□□□□□ -2.35
CDKL3Q8IVW4 RNU6-875P-201ENST00000516488 106 ntBASIC0.35□□□□□ -2.35
CDKL3Q8IVW4 AP000753.3-201ENST00000604083 169 ntBASIC0.35□□□□□ -2.35
CDKL3Q8IVW4 AC006157.1-201ENST00000611750 366 ntBASIC0.35□□□□□ -2.35
CDKL3Q8IVW4 AC122108.2-201ENST00000611946 526 ntBASIC0.35□□□□□ -2.35
CDKL3Q8IVW4 MIR8087-201ENST00000612745 78 ntBASIC0.35□□□□□ -2.35
CDKL3Q8IVW4 Y_RNA.58-201ENST00000362807 102 ntBASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.154-201ENST00000363624 102 ntBASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 RNY3P1-201ENST00000365085 102 ntBASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.315-201ENST00000365117 102 ntBASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 RNU6-934P-201ENST00000365154 107 ntBASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 MIR573-201ENST00000384964 99 ntBASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 RNU6-308P-201ENST00000390957 107 ntBASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 SNORD83.1-201ENST00000411362 77 ntBASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 AL358176.2-201ENST00000425769 204 ntBASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 AC091959.1-201ENST00000495857 238 ntBASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 RNU7-25P-201ENST00000516544 62 ntBASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 RNU6-899P-201ENST00000363947 107 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.263-201ENST00000364659 114 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.418-201ENST00000384029 102 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.547-201ENST00000384654 119 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 MIR520F-201ENST00000384824 87 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 MIR520H-201ENST00000385126 88 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 MIR140-201ENST00000385282 100 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 RNU6-1009P-201ENST00000390996 107 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 RNU6-977P-201ENST00000516411 103 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 RNU6-1046P-201ENST00000516538 107 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 MIR4771-2-201ENST00000577758 74 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 MIR4771-1-201ENST00000582617 74 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 MIR4264-201ENST00000583520 66 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 LARP7P1-201ENST00000605576 316 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 uc_338.4-201ENST00000616635 176 ntBASIC0.33□□□□□ -2.36
CDKL3Q8IVW4 SNORD113-8-201ENST00000363497 74 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 RNU6-1205P-201ENST00000363625 106 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.222-201ENST00000364264 102 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 RNU6-763P-201ENST00000390865 106 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 MIR548O-201ENST00000408583 114 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 AC023449.1-201ENST00000454464 154 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 AC107297.1-201ENST00000459991 176 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 AC082651.2-201ENST00000496833 166 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 RNU6-507P-201ENST00000516045 100 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 RNU6-475P-201ENST00000516073 104 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 AC020891.4-201ENST00000605745 93 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 AC007485.1-201ENST00000616755 206 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 AC022140.2-201ENST00000623500 188 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 AC112487.2-201ENST00000637950 304 ntBASIC0.32□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.197-201ENST00000364004 102 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 RNU6-144P-201ENST00000383951 107 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.579-201ENST00000390939 94 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 MIR1302-11-201ENST00000408051 138 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 MIR1302-9-201ENST00000408365 138 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 MIR1302-10-201ENST00000408734 138 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 RNU6-383P-201ENST00000410864 94 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 RNU6-1170P-201ENST00000515974 106 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 RNU6-764P-201ENST00000516396 105 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 RNU7-149P-201ENST00000516739 59 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 MIR1302-2-201ENST00000607096 138 ntBASIC0.31□□□□□ -2.36
CDKL3Q8IVW4 MIR18A-201ENST00000362310 71 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.241-201ENST00000364470 117 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.424-201ENST00000384063 103 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 SNORA24-201ENST00000384096 131 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 RNU6-102P-201ENST00000384485 104 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.602-201ENST00000410535 92 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 RNU7-62P-201ENST00000458856 62 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 RNU7-67P-201ENST00000459003 62 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 snoU13.16-201ENST00000459350 104 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 MRPS35P2-201ENST00000508242 191 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 RNU6-397P-201ENST00000516226 104 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 AC007751.1-201ENST00000529260 376 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 MIR376A1-201ENST00000616574 68 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 AC134878.1-201ENST00000619901 243 ntBASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.3□□□□□ -2.36
CDKL3Q8IVW4 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.136-201ENST00000363444 102 ntBASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 RNU6-716P-201ENST00000365621 103 ntBASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 RNU2-70P-201ENST00000410718 179 ntBASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.666-201ENST00000516187 112 ntBASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 MIR3612-201ENST00000579753 87 ntBASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 MIR4804-201ENST00000581683 73 ntBASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 MIR4676-201ENST00000583078 72 ntBASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 AL049861.1-201ENST00000603130 150 ntBASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 C8orf59P2-201ENST00000603441 271 ntBASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 AL162730.1-201ENST00000605734 292 ntBASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 AL021707.8-201ENST00000609428 183 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms