Protein–RNA interactions for Protein: Q86UA6

RPAIN, RPA-interacting protein, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAINQ86UA6 AL020996.3-201ENST00000606617 222 ntBASIC1.11□□□□□ -2.23
RPAINQ86UA6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.11□□□□□ -2.23
RPAINQ86UA6 U2.14-201ENST00000615943 113 ntBASIC1.11□□□□□ -2.23
RPAINQ86UA6 Y_RNA.336-201ENST00000365307 109 ntBASIC1.1□□□□□ -2.23
RPAINQ86UA6 Y_RNA.556-201ENST00000384677 113 ntBASIC1.1□□□□□ -2.23
RPAINQ86UA6 MIR452-201ENST00000385020 85 ntBASIC1.1□□□□□ -2.23
RPAINQ86UA6 SNORD41-201ENST00000386967 70 ntBASIC1.1□□□□□ -2.23
RPAINQ86UA6 MIR1302-3-201ENST00000408128 138 ntBASIC1.1□□□□□ -2.23
RPAINQ86UA6 RNU6-651P-201ENST00000411040 105 ntBASIC1.1□□□□□ -2.23
RPAINQ86UA6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.1□□□□□ -2.23
RPAINQ86UA6 RNU6-1007P-201ENST00000516586 107 ntBASIC1.1□□□□□ -2.23
RPAINQ86UA6 MIR4724-201ENST00000579485 89 ntBASIC1.1□□□□□ -2.23
RPAINQ86UA6 AC087685.1-201ENST00000587507 141 ntBASIC1.1□□□□□ -2.23
RPAINQ86UA6 Y_RNA.14-201ENST00000362415 103 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 Y_RNA.30-201ENST00000362572 97 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 Y_RNA.82-201ENST00000363000 102 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 Y_RNA.92-201ENST00000363043 102 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 SNORD14E-201ENST00000364009 85 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 Y_RNA.235-201ENST00000364412 102 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 Y_RNA.288-201ENST00000364854 92 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 Y_RNA.306-201ENST00000365015 102 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 Y_RNA.312-201ENST00000365089 102 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 Y_RNA.322-201ENST00000365151 102 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 MIR526A2-201ENST00000390198 65 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 RNA5SP496-201ENST00000391240 109 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 MTND3P2-201ENST00000438452 342 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 AC023449.1-201ENST00000454464 154 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 SNORD127-201ENST00000458892 86 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 Y_RNA.650-201ENST00000459002 102 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 Y_RNA.777-201ENST00000516982 102 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 RNU6-165P-201ENST00000517170 99 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 AC090142.3-201ENST00000519012 385 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 MIR5688-201ENST00000580619 83 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 AC008507.4-201ENST00000585464 127 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 Y_RNA.771-201ENST00000598668 102 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 Y_RNA.789-201ENST00000622480 102 ntBASIC1.09□□□□□ -2.23
RPAINQ86UA6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
RPAINQ86UA6 MIR367-201ENST00000362299 68 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 RNU4-10P-201ENST00000364383 140 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 Y_RNA.352-201ENST00000365439 102 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 MIR516B2-201ENST00000385190 85 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 MIR136-201ENST00000385207 82 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
RPAINQ86UA6 AL603910.2-201ENST00000407268 136 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 Y_RNA.590-201ENST00000410140 107 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 RNU2-38P-201ENST00000410856 79 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.08□□□□□ -2.24
RPAINQ86UA6 SNORD2.1-201ENST00000458762 69 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.08□□□□□ -2.24
RPAINQ86UA6 MIR3973-201ENST00000579824 107 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 MIR4282-201ENST00000583613 67 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 AL021707.8-201ENST00000609428 183 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 Y_RNA.802-201ENST00000614892 130 ntBASIC1.08□□□□□ -2.24
RPAINQ86UA6 RNU1-36P-201ENST00000365130 165 ntBASIC1.07□□□□□ -2.24
RPAINQ86UA6 RNU6-442P-201ENST00000383968 104 ntBASIC1.07□□□□□ -2.24
RPAINQ86UA6 MIR626-201ENST00000385032 94 ntBASIC1.07□□□□□ -2.24
RPAINQ86UA6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.07□□□□□ -2.24
RPAINQ86UA6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.07□□□□□ -2.24
RPAINQ86UA6 MIR4643-201ENST00000577473 78 ntBASIC1.07□□□□□ -2.24
RPAINQ86UA6 AC006006.1-201ENST00000603082 144 ntBASIC1.07□□□□□ -2.24
RPAINQ86UA6 AL357312.1-201ENST00000603879 298 ntBASIC1.07□□□□□ -2.24
RPAINQ86UA6 U4.1-201ENST00000620349 87 ntBASIC1.07□□□□□ -2.24
RPAINQ86UA6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.07□□□□□ -2.24
RPAINQ86UA6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
RPAINQ86UA6 Y_RNA.24-201ENST00000362508 103 ntBASIC1.06□□□□□ -2.24
RPAINQ86UA6 SNORA8.3-201ENST00000384679 139 ntBASIC1.06□□□□□ -2.24
RPAINQ86UA6 Y_RNA.562-201ENST00000384695 113 ntBASIC1.06□□□□□ -2.24
RPAINQ86UA6 MIR802-201ENST00000390235 94 ntBASIC1.06□□□□□ -2.24
RPAINQ86UA6 SNORD72-201ENST00000390994 80 ntBASIC1.06□□□□□ -2.24
RPAINQ86UA6 SNRPGP14-201ENST00000435400 219 ntBASIC1.06□□□□□ -2.24
RPAINQ86UA6 Y_RNA.668-201ENST00000516233 93 ntBASIC1.06□□□□□ -2.24
RPAINQ86UA6 RNU6-947P-201ENST00000516264 106 ntBASIC1.06□□□□□ -2.24
RPAINQ86UA6 Y_RNA.679-201ENST00000516416 91 ntBASIC1.06□□□□□ -2.24
RPAINQ86UA6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.06□□□□□ -2.24
RPAINQ86UA6 MIR4503-201ENST00000582187 83 ntBASIC1.06□□□□□ -2.24
RPAINQ86UA6 uc_338.4-201ENST00000616635 176 ntBASIC1.06□□□□□ -2.24
RPAINQ86UA6 Y_RNA.54-201ENST00000362766 105 ntBASIC1.05□□□□□ -2.24
RPAINQ86UA6 RNU6-268P-201ENST00000364174 107 ntBASIC1.05□□□□□ -2.24
RPAINQ86UA6 Y_RNA.242-201ENST00000364473 110 ntBASIC1.05□□□□□ -2.24
RPAINQ86UA6 Y_RNA.277-201ENST00000364754 102 ntBASIC1.05□□□□□ -2.24
RPAINQ86UA6 RNU6-196P-201ENST00000384315 107 ntBASIC1.05□□□□□ -2.24
RPAINQ86UA6 SNORD38C-201ENST00000384381 69 ntBASIC1.05□□□□□ -2.24
RPAINQ86UA6 Y_RNA.572-201ENST00000384757 98 ntBASIC1.05□□□□□ -2.24
RPAINQ86UA6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.05□□□□□ -2.24
RPAINQ86UA6 SNORA74.3-201ENST00000517108 154 ntBASIC1.05□□□□□ -2.24
RPAINQ86UA6 AL049861.1-201ENST00000603130 150 ntBASIC1.05□□□□□ -2.24
RPAINQ86UA6 MIR548H3-201ENST00000408771 118 ntBASIC1.04□□□□□ -2.24
RPAINQ86UA6 AC245047.8-201ENST00000456455 284 ntBASIC1.04□□□□□ -2.24
RPAINQ86UA6 RNU7-149P-201ENST00000516739 59 ntBASIC1.04□□□□□ -2.24
RPAINQ86UA6 SNORA70.22-201ENST00000517160 124 ntBASIC1.04□□□□□ -2.24
RPAINQ86UA6 AC100767.1-201ENST00000528178 123 ntBASIC1.04□□□□□ -2.24
RPAINQ86UA6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
RPAINQ86UA6 AC062037.2-201ENST00000610137 73 ntBASIC1.04□□□□□ -2.24
RPAINQ86UA6 AC006441.5-201ENST00000612680 209 ntBASIC1.04□□□□□ -2.24
RPAINQ86UA6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.04□□□□□ -2.24
RPAINQ86UA6 AL365265.1-201ENST00000621045 234 ntBASIC1.04□□□□□ -2.24
RPAINQ86UA6 Y_RNA.76-201ENST00000362931 109 ntBASIC1.03□□□□□ -2.24
RPAINQ86UA6 RNU6-1138P-201ENST00000365359 106 ntBASIC1.03□□□□□ -2.24
RPAINQ86UA6 Y_RNA.416-201ENST00000384014 113 ntBASIC1.03□□□□□ -2.24
RPAINQ86UA6 MIR15B-201ENST00000385045 98 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 572 ms