Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC006157.1-201ENST00000611750 366 ntBASIC0.26□□□□□ -2.37
H3F3CQ6NXT2 AC006441.5-201ENST00000612680 209 ntBASIC0.26□□□□□ -2.37
H3F3CQ6NXT2 AC134878.1-201ENST00000619901 243 ntBASIC0.26□□□□□ -2.37
H3F3CQ6NXT2 AL606534.2-204ENST00000635008 178 ntBASIC0.26□□□□□ -2.37
H3F3CQ6NXT2 AC099654.14-201ENST00000638599 341 ntBASIC0.26□□□□□ -2.37
H3F3CQ6NXT2 AC010332.2-201ENST00000613083 1904 ntBASIC0.25□□□□□ -2.37
H3F3CQ6NXT2 RNU6-1115P-201ENST00000362490 106 ntBASIC0.25□□□□□ -2.37
H3F3CQ6NXT2 RNU6-674P-201ENST00000363831 107 ntBASIC0.25□□□□□ -2.37
H3F3CQ6NXT2 Y_RNA.356-201ENST00000365475 113 ntBASIC0.25□□□□□ -2.37
H3F3CQ6NXT2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
H3F3CQ6NXT2 MIR548O-201ENST00000408583 114 ntBASIC0.25□□□□□ -2.37
H3F3CQ6NXT2 RNU6-130P-201ENST00000411112 103 ntBASIC0.25□□□□□ -2.37
H3F3CQ6NXT2 AC107297.1-201ENST00000459991 176 ntBASIC0.25□□□□□ -2.37
H3F3CQ6NXT2 RNU6-1007P-201ENST00000516586 107 ntBASIC0.25□□□□□ -2.37
H3F3CQ6NXT2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.25□□□□□ -2.37
H3F3CQ6NXT2 PART1_1.1-201ENST00000611761 217 ntBASIC0.25□□□□□ -2.37
H3F3CQ6NXT2 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 MIRLET7D-201ENST00000362263 87 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 Y_RNA.5-201ENST00000362334 102 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 Y_RNA.258-201ENST00000364613 105 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 RNU6-580P-201ENST00000365159 107 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 RNU6-763P-201ENST00000390865 106 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 MRPS35P2-201ENST00000508242 191 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 RNU2-13P-201ENST00000515909 113 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 RNU6-397P-201ENST00000516226 104 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 RNU7-149P-201ENST00000516739 59 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 MIR4264-201ENST00000583520 66 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 AC092634.7-201ENST00000621022 103 ntBASIC0.24□□□□□ -2.37
H3F3CQ6NXT2 MIR103A1-201ENST00000362165 78 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 RNU6-1309P-201ENST00000363305 108 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 RNU6-1205P-201ENST00000363625 106 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 SNORD63-201ENST00000384262 68 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 MT-TN-201ENST00000387400 73 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 AL358176.2-201ENST00000425769 204 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 HMGN1P33-201ENST00000432945 451 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 AC023449.1-201ENST00000454464 154 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 RNU7-56P-201ENST00000458744 62 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 SNORD19B-201ENST00000459623 84 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 AC091959.1-201ENST00000495857 238 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 SEPT14P8-201ENST00000508026 178 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 SNORA25.12-201ENST00000516202 82 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 RNU6-191P-201ENST00000516295 94 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 RNA5SP330-201ENST00000517096 96 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 AC040926.1-201ENST00000530195 238 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 UBE2V2P2-201ENST00000587677 504 ntBASIC0.23□□□□□ -2.37
H3F3CQ6NXT2 MIR377-201ENST00000362145 69 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 SNORD113-8-201ENST00000363497 74 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 Y_RNA.418-201ENST00000384029 102 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 RNU6-102P-201ENST00000384485 104 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 Y_RNA.529-201ENST00000384586 119 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 BTF3P11-201ENST00000426582 477 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 snoU13.16-201ENST00000459350 104 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 RNU6-1170P-201ENST00000515974 106 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 SNORA40.14-201ENST00000516543 86 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 AC008608.1-201ENST00000603910 127 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 SNORD113-5-201ENST00000607261 78 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 MIR8087-201ENST00000612745 78 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 AC007485.1-201ENST00000616755 206 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 MIR6740-201ENST00000618268 113 ntBASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.22□□□□□ -2.37
H3F3CQ6NXT2 SNORA72.1-201ENST00000363485 129 ntBASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 RNU6-899P-201ENST00000363947 107 ntBASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 RNU6-364P-201ENST00000384387 107 ntBASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 MIR518F-201ENST00000384973 87 ntBASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 RNU6-913P-201ENST00000390913 95 ntBASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 MIR938-201ENST00000401216 83 ntBASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 AL138752.1-201ENST00000452964 351 ntBASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 RNU6-764P-201ENST00000516396 105 ntBASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 SNORA18.4-201ENST00000516440 124 ntBASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 AC023932.2-201ENST00000603176 175 ntBASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 AC022140.2-201ENST00000623500 188 ntBASIC0.21□□□□□ -2.38
H3F3CQ6NXT2 Y_RNA.14-201ENST00000362415 103 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 RNA5SP457-201ENST00000363657 124 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 Y_RNA.252-201ENST00000364556 101 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 RNA5SP517-201ENST00000364724 117 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 Y_RNA.293-201ENST00000364908 93 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 SNORD38B-201ENST00000384690 67 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 MIR588-201ENST00000384900 83 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 RBMX2P4-201ENST00000441256 376 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 RNU6-507P-201ENST00000516045 100 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 SNORA25.18-201ENST00000607153 114 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 AC122108.2-201ENST00000611946 526 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 AL138825.1-201ENST00000618587 192 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 SNORD38B-202ENST00000625943 69 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 AC112487.2-201ENST00000637950 304 ntBASIC0.2□□□□□ -2.38
H3F3CQ6NXT2 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
H3F3CQ6NXT2 Y_RNA.315-201ENST00000365117 102 ntBASIC0.19□□□□□ -2.38
H3F3CQ6NXT2 Y_RNA.505-201ENST00000384489 102 ntBASIC0.19□□□□□ -2.38
H3F3CQ6NXT2 Y_RNA.579-201ENST00000390939 94 ntBASIC0.19□□□□□ -2.38
H3F3CQ6NXT2 RNU6-1248P-201ENST00000391096 64 ntBASIC0.19□□□□□ -2.38
H3F3CQ6NXT2 RNU7-102P-201ENST00000458948 62 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms