Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.04□□□□□ -2.08
SLC44A4Q53GD3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.04□□□□□ -2.08
SLC44A4Q53GD3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.04□□□□□ -2.08
SLC44A4Q53GD3 RNU6-508P-201ENST00000363231 103 ntBASIC2.03□□□□□ -2.08
SLC44A4Q53GD3 RNU6-1138P-201ENST00000365359 106 ntBASIC2.03□□□□□ -2.08
SLC44A4Q53GD3 RNU6-80P-201ENST00000384195 107 ntBASIC2.03□□□□□ -2.08
SLC44A4Q53GD3 SNORA17.3-201ENST00000391159 129 ntBASIC2.03□□□□□ -2.08
SLC44A4Q53GD3 AL021397.1-201ENST00000451806 248 ntBASIC2.03□□□□□ -2.08
SLC44A4Q53GD3 RNU7-107P-201ENST00000459121 61 ntBASIC2.03□□□□□ -2.08
SLC44A4Q53GD3 MRPS17P9-201ENST00000511924 393 ntBASIC2.03□□□□□ -2.08
SLC44A4Q53GD3 AL359881.1-201ENST00000602916 267 ntBASIC2.03□□□□□ -2.08
SLC44A4Q53GD3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 RNU6-235P-201ENST00000362644 107 ntBASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 SNORD68-201ENST00000363214 84 ntBASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 SNORD20-201ENST00000384550 80 ntBASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 RNA5SP212-201ENST00000391223 107 ntBASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 MIR1287-201ENST00000408492 90 ntBASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 RPL23AP6-201ENST00000446637 472 ntBASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 MIR4709-201ENST00000577272 72 ntBASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 AC097639.2-201ENST00000603159 172 ntBASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 snoU13.31-201ENST00000607291 104 ntBASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 U7.2-201ENST00000607576 63 ntBASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
SLC44A4Q53GD3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 AC008555.8-201ENST00000623602 2168 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 MIR378A-201ENST00000362177 66 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 MIR126-201ENST00000362291 85 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 Y_RNA.66-201ENST00000362862 102 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 SNORD50B-201ENST00000364995 70 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 SNORA1-201ENST00000384107 130 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 RNU6-1031P-201ENST00000384773 107 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 Y_RNA.629-201ENST00000411368 105 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 RNU6-659P-201ENST00000516454 104 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 RNU6-365P-201ENST00000517113 106 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 AL358944.1-201ENST00000528537 144 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 AC022254.1-201ENST00000567857 235 ntBASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.01□□□□□ -2.09
SLC44A4Q53GD3 RN7SKP200-201ENST00000410564 320 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2□□□□□ -2.09
SLC44A4Q53GD3 AC099513.1-201ENST00000490423 301 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 Y_RNA.666-201ENST00000516187 112 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 RNA5SP481-201ENST00000516814 122 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 RNU6-1270P-201ENST00000517128 108 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 RNU6-1116P-201ENST00000517269 99 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 RNU2-60P-201ENST00000517290 128 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 AC007751.1-201ENST00000529260 376 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 MIR5089-201ENST00000580047 84 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 AC131055.1-201ENST00000584626 316 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
SLC44A4Q53GD3 AC021506.2-201ENST00000612354 169 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2□□□□□ -2.09
SLC44A4Q53GD3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
SLC44A4Q53GD3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SLC44A4Q53GD3 AL391516.1-201ENST00000554380 2449 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 RNU6-457P-201ENST00000363999 107 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 RNU6-309P-201ENST00000364573 106 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 RNA5SP190-201ENST00000365222 118 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 Y_RNA.353-201ENST00000365440 108 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 SNORD61-201ENST00000384252 73 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 SNORA26-201ENST00000391286 122 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 CALM2P4-201ENST00000430810 426 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 RNU5E-3P-201ENST00000515913 68 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 SNORA18.4-201ENST00000516440 124 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 MIR4662B-201ENST00000579498 81 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 MIR3129-201ENST00000581095 76 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 MIR7111-201ENST00000619751 72 ntBASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SLC44A4Q53GD3 RNU6-203P-201ENST00000384038 104 ntBASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 MIR522-201ENST00000385071 87 ntBASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 BTF3P4-201ENST00000418852 495 ntBASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 SNORA25.15-201ENST00000516487 89 ntBASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 MIR3122-201ENST00000577243 73 ntBASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 AC008507.4-201ENST00000585464 127 ntBASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 AL096840.1-201ENST00000603287 93 ntBASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 AC095038.3-201ENST00000634439 195 ntBASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 ICE2P2-201ENST00000483823 2787 ntBASIC1.98□□□□□ -2.09
SLC44A4Q53GD3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 RNU6-215P-201ENST00000365169 102 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 RNU6-44P-201ENST00000384045 107 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 RNA5SP482-201ENST00000391269 118 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 U8.16-201ENST00000391279 133 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 RNU6-693P-201ENST00000516134 107 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 RNU6-504P-201ENST00000516568 104 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms