Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MIR5704-201ENST00000584029 77 ntBASIC-1.94□□□□□ -2.72
CCDC58Q4VC31 AP001282.2-201ENST00000616149 309 ntBASIC-1.94□□□□□ -2.72
CCDC58Q4VC31 MIR7844-201ENST00000616161 122 ntBASIC-1.94□□□□□ -2.72
CCDC58Q4VC31 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.94□□□□□ -2.72
CCDC58Q4VC31 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.95□□□□□ -2.72
CCDC58Q4VC31 SNORD74.6-201ENST00000364796 70 ntBASIC-1.95□□□□□ -2.72
CCDC58Q4VC31 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.95□□□□□ -2.72
CCDC58Q4VC31 RNU6-636P-201ENST00000384598 107 ntBASIC-1.95□□□□□ -2.72
CCDC58Q4VC31 RNA5SP237-201ENST00000410414 113 ntBASIC-1.95□□□□□ -2.72
CCDC58Q4VC31 RNU6-625P-201ENST00000459412 107 ntBASIC-1.95□□□□□ -2.72
CCDC58Q4VC31 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 SNORA69-201ENST00000383895 132 ntBASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 RNU6-456P-201ENST00000384493 107 ntBASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 RNU6-83P-201ENST00000384568 112 ntBASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 MTND3P8-201ENST00000412909 339 ntBASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 MTND3P23-201ENST00000431980 347 ntBASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 USP9YP23-201ENST00000455085 407 ntBASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 AL356010.1-201ENST00000456364 102 ntBASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 RNU6-479P-201ENST00000516348 105 ntBASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 RNA5SP461-201ENST00000516451 104 ntBASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 SNORA25.16-201ENST00000516741 121 ntBASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 AC007671.2-201ENST00000637344 619 ntBASIC-1.96□□□□□ -2.72
CCDC58Q4VC31 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 RNU6-790P-201ENST00000384479 105 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 AC074085.1-201ENST00000413598 418 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 USMG5P1-201ENST00000425964 177 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 AC009961.2-201ENST00000435771 251 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 SERF1AP1-201ENST00000514575 187 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 RNU7-175P-201ENST00000515915 61 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 MIR5591-201ENST00000578248 65 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 POLR3GP2-201ENST00000588366 668 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 AC145423.2-201ENST00000610631 239 ntBASIC-1.97□□□□□ -2.72
CCDC58Q4VC31 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.98□□□□□ -2.73
CCDC58Q4VC31 SNORD115-35-201ENST00000365122 82 ntBASIC-1.98□□□□□ -2.73
CCDC58Q4VC31 AL603910.2-201ENST00000407268 136 ntBASIC-1.98□□□□□ -2.73
CCDC58Q4VC31 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.98□□□□□ -2.73
CCDC58Q4VC31 MIR548AE1-201ENST00000583292 70 ntBASIC-1.98□□□□□ -2.73
CCDC58Q4VC31 MIR4999-201ENST00000585029 91 ntBASIC-1.98□□□□□ -2.73
CCDC58Q4VC31 MIR8068-201ENST00000618032 68 ntBASIC-1.98□□□□□ -2.73
CCDC58Q4VC31 AC009161.2-201ENST00000624626 138 ntBASIC-1.98□□□□□ -2.73
CCDC58Q4VC31 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.99□□□□□ -2.73
CCDC58Q4VC31 SNORD72-201ENST00000390994 80 ntBASIC-1.99□□□□□ -2.73
CCDC58Q4VC31 MIR8485-201ENST00000401372 91 ntBASIC-1.99□□□□□ -2.73
CCDC58Q4VC31 RNU2-9P-201ENST00000410194 145 ntBASIC-1.99□□□□□ -2.73
CCDC58Q4VC31 SNORD113-7-201ENST00000363762 77 ntBASIC-2□□□□□ -2.73
CCDC58Q4VC31 RNU6-82P-201ENST00000363970 107 ntBASIC-2□□□□□ -2.73
CCDC58Q4VC31 Y_RNA.547-201ENST00000384654 119 ntBASIC-2□□□□□ -2.73
CCDC58Q4VC31 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-2□□□□□ -2.73
CCDC58Q4VC31 TPTE2P5-203ENST00000458118 728 ntBASIC-2□□□□□ -2.73
CCDC58Q4VC31 RNU7-25P-201ENST00000516544 62 ntBASIC-2□□□□□ -2.73
CCDC58Q4VC31 AL121757.2-201ENST00000611223 313 ntBASIC-2□□□□□ -2.73
CCDC58Q4VC31 RNU6-973P-201ENST00000364690 107 ntBASIC-2.01□□□□□ -2.73
CCDC58Q4VC31 RNU6-192P-201ENST00000391253 100 ntBASIC-2.01□□□□□ -2.73
CCDC58Q4VC31 RNA5SP266-201ENST00000410273 108 ntBASIC-2.01□□□□□ -2.73
CCDC58Q4VC31 RNU6-1190P-201ENST00000410811 104 ntBASIC-2.01□□□□□ -2.73
CCDC58Q4VC31 RNU5E-9P-201ENST00000411164 104 ntBASIC-2.01□□□□□ -2.73
CCDC58Q4VC31 CYCSP46-201ENST00000423569 204 ntBASIC-2.01□□□□□ -2.73
CCDC58Q4VC31 MIR4424-201ENST00000585257 86 ntBASIC-2.01□□□□□ -2.73
CCDC58Q4VC31 AC092747.3-201ENST00000603769 301 ntBASIC-2.01□□□□□ -2.73
CCDC58Q4VC31 AC011603.4-201ENST00000611325 277 ntBASIC-2.01□□□□□ -2.73
CCDC58Q4VC31 RNU6-1209P-201ENST00000363655 107 ntBASIC-2.02□□□□□ -2.73
CCDC58Q4VC31 RNU1-141P-201ENST00000364623 158 ntBASIC-2.02□□□□□ -2.73
CCDC58Q4VC31 RNU6-1310P-201ENST00000384153 107 ntBASIC-2.02□□□□□ -2.73
CCDC58Q4VC31 AL031003.1-201ENST00000404229 172 ntBASIC-2.02□□□□□ -2.73
CCDC58Q4VC31 RNU2-61P-201ENST00000411069 191 ntBASIC-2.02□□□□□ -2.73
CCDC58Q4VC31 CEP57L1P1-201ENST00000430943 1201 ntBASIC-2.02□□□□□ -2.73
CCDC58Q4VC31 SNORA19.2-201ENST00000516013 114 ntBASIC-2.02□□□□□ -2.73
CCDC58Q4VC31 MIR6854-201ENST00000614935 69 ntBASIC-2.02□□□□□ -2.73
CCDC58Q4VC31 Y_RNA.121-201ENST00000363309 113 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 RNU6-154P-201ENST00000384306 106 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 RNU6-905P-201ENST00000384434 107 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 AC016907.1-201ENST00000419483 435 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 MTCYBP8-201ENST00000422855 651 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 RNU7-187P-201ENST00000458985 68 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 RNU7-134P-201ENST00000458997 64 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 RPS29P24-201ENST00000486345 171 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 RNA5SP476-201ENST00000516613 103 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 AP003733.2-201ENST00000529409 171 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 MIR4770-201ENST00000579149 58 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 AC245014.2-201ENST00000603689 287 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 AC073534.2-201ENST00000620377 381 ntBASIC-2.03□□□□□ -2.73
CCDC58Q4VC31 RNU6-500P-201ENST00000362349 107 ntBASIC-2.04□□□□□ -2.74
CCDC58Q4VC31 RNU6-282P-201ENST00000365357 103 ntBASIC-2.04□□□□□ -2.74
CCDC58Q4VC31 Y_RNA.405-201ENST00000383979 100 ntBASIC-2.04□□□□□ -2.74
CCDC58Q4VC31 Y_RNA.451-201ENST00000384200 100 ntBASIC-2.04□□□□□ -2.74
CCDC58Q4VC31 Y_RNA.524-201ENST00000384564 100 ntBASIC-2.04□□□□□ -2.74
CCDC58Q4VC31 Y_RNA.561-201ENST00000384694 100 ntBASIC-2.04□□□□□ -2.74
CCDC58Q4VC31 AL606923.1-201ENST00000406616 190 ntBASIC-2.04□□□□□ -2.74
CCDC58Q4VC31 EIF1P2-201ENST00000428233 350 ntBASIC-2.04□□□□□ -2.74
CCDC58Q4VC31 RNU6-226P-201ENST00000363778 107 ntBASIC-2.05□□□□□ -2.74
CCDC58Q4VC31 RNU6-1138P-201ENST00000365359 106 ntBASIC-2.05□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms