Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 SNORA36B-201ENST00000410438 131 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 RNU4-14P-201ENST00000410858 122 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SEPT7P4-201ENST00000437076 306 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 Z83846.1-201ENST00000446798 265 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 RNU6-718P-201ENST00000516166 105 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 RNU7-30P-201ENST00000516835 62 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 RNU6-958P-201ENST00000516995 106 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 AC133485.4-201ENST00000561835 220 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-40-201ENST00000606510 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 AC002553.4-201ENST00000616896 331 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 AL109933.3-201ENST00000619095 188 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD81.1-201ENST00000363064 77 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 RNU4-50P-201ENST00000364361 141 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 RNU6-890P-201ENST00000384121 107 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 MIR548F1-201ENST00000408667 84 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 RNU2-59P-201ENST00000410482 191 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 RNU7-141P-201ENST00000459304 62 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 MTND4P17-201ENST00000470444 350 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 RNA5SP227-201ENST00000516184 113 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 RNU6-448P-201ENST00000517052 107 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 MIR3145-201ENST00000580727 82 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 AC022306.2-201ENST00000617563 647 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 AC098679.4-201ENST00000624241 654 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 MIR371B-201ENST00000638082 66 ntBASIC-0.07□□□□□ -2.42
ZNF404Q494X3 SNORA36.1-201ENST00000363424 132 ntBASIC-0.08□□□□□ -2.42
ZNF404Q494X3 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.08□□□□□ -2.42
ZNF404Q494X3 RNA5SP127-201ENST00000411051 133 ntBASIC-0.08□□□□□ -2.42
ZNF404Q494X3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.08□□□□□ -2.42
ZNF404Q494X3 AC138305.3-201ENST00000624988 240 ntBASIC-0.08□□□□□ -2.42
ZNF404Q494X3 SNORA9.1-201ENST00000362412 131 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 SNORA72.1-201ENST00000363485 129 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
ZNF404Q494X3 MTCO1P5-201ENST00000433573 344 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 RNU7-73P-201ENST00000458743 63 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 RNU6-469P-201ENST00000516253 101 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 RNU7-110P-201ENST00000516891 62 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 MIR5690-201ENST00000583739 73 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 AC005357.1-201ENST00000588399 301 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 AP000942.4-201ENST00000604811 241 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 AC104408.1-201ENST00000605241 170 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 MIR8055-201ENST00000610739 97 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 Z97988.1-201ENST00000637697 135 ntBASIC-0.09□□□□□ -2.42
ZNF404Q494X3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.1□□□□□ -2.43
ZNF404Q494X3 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.1□□□□□ -2.43
ZNF404Q494X3 RNU6-623P-201ENST00000363143 105 ntBASIC-0.1□□□□□ -2.43
ZNF404Q494X3 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.1□□□□□ -2.43
ZNF404Q494X3 RNU6-913P-201ENST00000390913 95 ntBASIC-0.1□□□□□ -2.43
ZNF404Q494X3 AC016907.1-201ENST00000419483 435 ntBASIC-0.1□□□□□ -2.43
ZNF404Q494X3 AC096644.2-201ENST00000429278 159 ntBASIC-0.1□□□□□ -2.43
ZNF404Q494X3 snoU13.2-201ENST00000459201 104 ntBASIC-0.1□□□□□ -2.43
ZNF404Q494X3 AC011373.1-201ENST00000607270 237 ntBASIC-0.1□□□□□ -2.43
ZNF404Q494X3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.1□□□□□ -2.43
ZNF404Q494X3 SNORA72.4-201ENST00000384174 132 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 MIR563-201ENST00000385080 79 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 MT-TF-201ENST00000387314 71 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 RNU2-14P-201ENST00000411053 191 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 FCF1P9-201ENST00000412546 282 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 HMGN1P33-201ENST00000432945 451 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 AC099799.1-201ENST00000439809 192 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 AC023449.1-201ENST00000454464 154 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 AC069439.1-201ENST00000494739 167 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 RNU7-53P-201ENST00000516705 60 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 VN1R91P-201ENST00000594377 169 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 AC080013.6-201ENST00000606185 215 ntBASIC-0.11□□□□□ -2.43
ZNF404Q494X3 SNORD114-5-201ENST00000362928 70 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 SNORA1.1-201ENST00000364671 133 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 SNORA26.5-201ENST00000391215 123 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 AC087499.4-201ENST00000448505 178 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 RNU6-358P-201ENST00000516564 75 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 RNA5SP268-201ENST00000516828 124 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.12□□□□□ -2.43
ZNF404Q494X3 AC141557.1-201ENST00000540982 400 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 AC006600.1-201ENST00000572529 153 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 AC010205.1-201ENST00000616668 449 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 MIR6755-201ENST00000619993 66 ntBASIC-0.12□□□□□ -2.43
ZNF404Q494X3 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.13□□□□□ -2.43
ZNF404Q494X3 SNORD115-28-201ENST00000363931 81 ntBASIC-0.13□□□□□ -2.43
ZNF404Q494X3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.13□□□□□ -2.43
ZNF404Q494X3 RNU6-602P-201ENST00000411155 105 ntBASIC-0.13□□□□□ -2.43
ZNF404Q494X3 RNU6-848P-201ENST00000515948 107 ntBASIC-0.13□□□□□ -2.43
ZNF404Q494X3 RNU6-617P-201ENST00000516147 107 ntBASIC-0.13□□□□□ -2.43
ZNF404Q494X3 RNU6-473P-201ENST00000516164 107 ntBASIC-0.13□□□□□ -2.43
ZNF404Q494X3 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.13□□□□□ -2.43
ZNF404Q494X3 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.13□□□□□ -2.43
ZNF404Q494X3 AC022140.2-201ENST00000623500 188 ntBASIC-0.13□□□□□ -2.43
ZNF404Q494X3 AC067863.3-201ENST00000624172 122 ntBASIC-0.13□□□□□ -2.43
ZNF404Q494X3 RNU6-21P-201ENST00000384710 107 ntBASIC-0.14□□□□□ -2.43
ZNF404Q494X3 MIR644A-201ENST00000385262 94 ntBASIC-0.14□□□□□ -2.43
ZNF404Q494X3 SNORA40.5-201ENST00000391061 128 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms