Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 MIR4778-201ENST00000577635 80 ntBASIC1.75□□□□□ -2.13
PTCHD3Q3KNS1 AC015688.6-201ENST00000577737 104 ntBASIC1.75□□□□□ -2.13
PTCHD3Q3KNS1 MIR3198-2-201ENST00000577868 80 ntBASIC1.75□□□□□ -2.13
PTCHD3Q3KNS1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.75□□□□□ -2.13
PTCHD3Q3KNS1 MIR8081-201ENST00000611533 95 ntBASIC1.75□□□□□ -2.13
PTCHD3Q3KNS1 Y_RNA.778-201ENST00000620203 90 ntBASIC1.75□□□□□ -2.13
PTCHD3Q3KNS1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
PTCHD3Q3KNS1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PTCHD3Q3KNS1 Y_RNA.170-201ENST00000363746 110 ntBASIC1.74□□□□□ -2.13
PTCHD3Q3KNS1 Y_RNA.398-201ENST00000383952 99 ntBASIC1.74□□□□□ -2.13
PTCHD3Q3KNS1 Y_RNA.547-201ENST00000384654 119 ntBASIC1.74□□□□□ -2.13
PTCHD3Q3KNS1 RNU6-768P-201ENST00000384683 107 ntBASIC1.74□□□□□ -2.13
PTCHD3Q3KNS1 MIR653-201ENST00000385279 96 ntBASIC1.74□□□□□ -2.13
PTCHD3Q3KNS1 AC087499.4-201ENST00000448505 178 ntBASIC1.74□□□□□ -2.13
PTCHD3Q3KNS1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.74□□□□□ -2.13
PTCHD3Q3KNS1 SUMO2P16-201ENST00000519475 264 ntBASIC1.74□□□□□ -2.13
PTCHD3Q3KNS1 AC134878.1-201ENST00000619901 243 ntBASIC1.74□□□□□ -2.13
PTCHD3Q3KNS1 AC084768.2-201ENST00000622736 221 ntBASIC1.74□□□□□ -2.13
PTCHD3Q3KNS1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PTCHD3Q3KNS1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
PTCHD3Q3KNS1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.73□□□□□ -2.13
PTCHD3Q3KNS1 RNU6-457P-201ENST00000363999 107 ntBASIC1.73□□□□□ -2.13
PTCHD3Q3KNS1 Y_RNA.410-201ENST00000383992 113 ntBASIC1.73□□□□□ -2.13
PTCHD3Q3KNS1 MIR518F-201ENST00000384973 87 ntBASIC1.73□□□□□ -2.13
PTCHD3Q3KNS1 MIR513A1-201ENST00000385138 129 ntBASIC1.73□□□□□ -2.13
PTCHD3Q3KNS1 SNORA75.5-201ENST00000391291 81 ntBASIC1.73□□□□□ -2.13
PTCHD3Q3KNS1 snoU13.9-201ENST00000458927 103 ntBASIC1.73□□□□□ -2.13
PTCHD3Q3KNS1 RNU7-200P-201ENST00000516105 62 ntBASIC1.73□□□□□ -2.13
PTCHD3Q3KNS1 MIR6844-201ENST00000637122 62 ntBASIC1.73□□□□□ -2.13
PTCHD3Q3KNS1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 Y_RNA.8-201ENST00000362353 102 ntBASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 SNORD33-201ENST00000362761 85 ntBASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 SNORD115-28-201ENST00000363931 81 ntBASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 RNU6-1130P-201ENST00000365434 107 ntBASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 SNORD116-18-201ENST00000383961 92 ntBASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 Y_RNA.400-201ENST00000383963 111 ntBASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 RNU6-746P-201ENST00000384112 109 ntBASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 MIR526A1-201ENST00000384897 85 ntBASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 MIR624-201ENST00000385217 97 ntBASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 RNU7-25P-201ENST00000516544 62 ntBASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 AC090049.2-201ENST00000550377 109 ntBASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PTCHD3Q3KNS1 AL627390.1-201ENST00000396055 340 ntBASIC1.71□□□□□ -2.14
PTCHD3Q3KNS1 RNU4-57P-201ENST00000515980 135 ntBASIC1.71□□□□□ -2.14
PTCHD3Q3KNS1 RNA5SP458-201ENST00000516188 119 ntBASIC1.71□□□□□ -2.14
PTCHD3Q3KNS1 SNORA25.15-201ENST00000516487 89 ntBASIC1.71□□□□□ -2.14
PTCHD3Q3KNS1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.71□□□□□ -2.14
PTCHD3Q3KNS1 RNU6-1270P-201ENST00000517128 108 ntBASIC1.71□□□□□ -2.14
PTCHD3Q3KNS1 ICE2P2-201ENST00000483823 2787 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 Y_RNA.37-201ENST00000362606 108 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 RNU6-151P-201ENST00000364158 107 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 SNORA1-201ENST00000384107 130 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 Y_RNA.506-201ENST00000384494 102 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 RNA5SP127-201ENST00000411051 133 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 AL603825.1-201ENST00000438481 80 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 RNU6-322P-201ENST00000516010 103 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 MTND5P41-201ENST00000517498 206 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 AC024614.2-201ENST00000577584 372 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 AL513534.2-201ENST00000603836 250 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 AC015726.2-201ENST00000620112 122 ntBASIC1.7□□□□□ -2.14
PTCHD3Q3KNS1 MIR302D-201ENST00000362275 68 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 RNA5SP190-201ENST00000365222 118 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 RNA5SP259-201ENST00000365541 109 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 SNORD37.2-201ENST00000391075 66 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 SNORD77.3-201ENST00000391113 65 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 MIR548M-201ENST00000408260 86 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 RPL31P63-201ENST00000422565 375 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 AF228730.3-201ENST00000436691 102 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 SNORD13-201ENST00000459299 104 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 AC008834.1-201ENST00000511612 175 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 RNU6-917P-201ENST00000516294 104 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 FAM106DP-201ENST00000586416 501 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 MIR3658-201ENST00000636291 56 ntBASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.69□□□□□ -2.14
PTCHD3Q3KNS1 SNORA1.2-201ENST00000365189 134 ntBASIC1.68□□□□□ -2.14
PTCHD3Q3KNS1 MIR516B2-201ENST00000385190 85 ntBASIC1.68□□□□□ -2.14
PTCHD3Q3KNS1 U8.17-201ENST00000391292 132 ntBASIC1.68□□□□□ -2.14
PTCHD3Q3KNS1 AL603908.1-201ENST00000406098 201 ntBASIC1.68□□□□□ -2.14
PTCHD3Q3KNS1 SNORA18.4-201ENST00000516440 124 ntBASIC1.68□□□□□ -2.14
PTCHD3Q3KNS1 Y_RNA.703-201ENST00000516846 111 ntBASIC1.68□□□□□ -2.14
PTCHD3Q3KNS1 AC112693.2-201ENST00000556538 232 ntBASIC1.68□□□□□ -2.14
PTCHD3Q3KNS1 MIR3129-201ENST00000581095 76 ntBASIC1.68□□□□□ -2.14
PTCHD3Q3KNS1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.68□□□□□ -2.14
PTCHD3Q3KNS1 Y_RNA.215-201ENST00000364204 112 ntBASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 RNU6-1082P-201ENST00000364574 107 ntBASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 RNU6-818P-201ENST00000364837 108 ntBASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 RNU4-11P-201ENST00000365287 132 ntBASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 RNU6-1189P-201ENST00000383958 107 ntBASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 RNU6-588P-201ENST00000410281 105 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms