Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNA5SP496-201ENST00000391240 109 ntBASIC0.65□□□□□ -2.31
SCN1BQ07699 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.65□□□□□ -2.31
SCN1BQ07699 MTND4LP30-201ENST00000454092 297 ntBASIC0.65□□□□□ -2.31
SCN1BQ07699 AC107297.1-201ENST00000459991 176 ntBASIC0.65□□□□□ -2.31
SCN1BQ07699 AP001094.1-201ENST00000579805 193 ntBASIC0.65□□□□□ -2.31
SCN1BQ07699 MIR8070-201ENST00000616510 88 ntBASIC0.65□□□□□ -2.31
SCN1BQ07699 snoU2_19.2-201ENST00000363024 80 ntBASIC0.64□□□□□ -2.31
SCN1BQ07699 RNU6-1138P-201ENST00000365359 106 ntBASIC0.64□□□□□ -2.31
SCN1BQ07699 Y_RNA.460-201ENST00000384255 102 ntBASIC0.64□□□□□ -2.31
SCN1BQ07699 MIR1287-201ENST00000408492 90 ntBASIC0.64□□□□□ -2.31
SCN1BQ07699 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
SCN1BQ07699 RPL21P38-201ENST00000418090 167 ntBASIC0.64□□□□□ -2.31
SCN1BQ07699 ELOCP20-201ENST00000422460 345 ntBASIC0.64□□□□□ -2.31
SCN1BQ07699 RNY3P15-201ENST00000516297 97 ntBASIC0.64□□□□□ -2.31
SCN1BQ07699 RNA5SP102-201ENST00000516865 106 ntBASIC0.64□□□□□ -2.31
SCN1BQ07699 AC131281.1-201ENST00000522984 164 ntBASIC0.64□□□□□ -2.31
SCN1BQ07699 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.64□□□□□ -2.31
SCN1BQ07699 Y_RNA.19-201ENST00000362462 99 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 Y_RNA.122-201ENST00000363331 96 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 SNORA22B-201ENST00000383876 138 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 Y_RNA.494-201ENST00000384432 111 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 SNORD83.1-201ENST00000411362 77 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 AC090844.1-201ENST00000422019 156 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 AC015818.7-201ENST00000428754 109 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 AC087499.7-201ENST00000441958 109 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 RNU7-67P-201ENST00000459003 62 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 snoU13.16-201ENST00000459350 104 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 MIR4264-201ENST00000583520 66 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 AC134878.1-201ENST00000619901 243 ntBASIC0.63□□□□□ -2.31
SCN1BQ07699 SNORD115-34-201ENST00000362441 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 RNU6-369P-201ENST00000362515 102 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-12-201ENST00000362583 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-29-201ENST00000362834 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-9-201ENST00000362912 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-21-201ENST00000362963 81 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-14-201ENST00000363090 81 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-13-201ENST00000363358 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-41-201ENST00000363608 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-11-201ENST00000363616 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-5-201ENST00000363633 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-39-201ENST00000363694 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-4-201ENST00000363810 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-16-201ENST00000363887 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 RNU6-770P-201ENST00000363929 105 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-6-201ENST00000363942 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 Y_RNA.214-201ENST00000364201 112 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-42-201ENST00000364273 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-15-201ENST00000364809 81 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-1-201ENST00000364961 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-26-201ENST00000365067 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-10-201ENST00000365073 81 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 RNU6-326P-201ENST00000365480 107 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-43-201ENST00000365503 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-36-201ENST00000365629 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 RNU6-945P-201ENST00000383947 107 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORA36.2-201ENST00000384004 127 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 Y_RNA.527-201ENST00000384573 102 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD77.4-201ENST00000516158 81 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 AC007751.1-201ENST00000529260 376 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.62□□□□□ -2.31
SCN1BQ07699 SNORD115-40-201ENST00000606510 82 ntBASIC0.62□□□□□ -2.31
SCN1BQ07699 Y_RNA.128-201ENST00000363391 112 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 Y_RNA.138-201ENST00000363462 102 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 Y_RNA.210-201ENST00000364161 110 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 RNU6-806P-201ENST00000365147 105 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 RNU6-580P-201ENST00000365159 107 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 SNORA24-201ENST00000384096 131 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 Y_RNA.455-201ENST00000384230 98 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 Y_RNA.486-201ENST00000384398 107 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 RNA5SP220-201ENST00000516298 104 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN1BQ07699 MIR4771-2-201ENST00000577758 74 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 MIR4771-1-201ENST00000582617 74 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 AL008718.3-201ENST00000610217 321 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 RMST_2.1-201ENST00000617263 136 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
SCN1BQ07699 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
SCN1BQ07699 MIR96-201ENST00000362288 78 ntBASIC0.6□□□□□ -2.31
SCN1BQ07699 SNORD115-28-201ENST00000363931 81 ntBASIC0.6□□□□□ -2.31
SCN1BQ07699 RNU6-934P-201ENST00000365154 107 ntBASIC0.6□□□□□ -2.31
SCN1BQ07699 RNY1P8-201ENST00000383970 114 ntBASIC0.6□□□□□ -2.31
SCN1BQ07699 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
SCN1BQ07699 Y_RNA.711-201ENST00000516993 102 ntBASIC0.6□□□□□ -2.31
SCN1BQ07699 RNU6-958P-201ENST00000516995 106 ntBASIC0.6□□□□□ -2.31
SCN1BQ07699 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.6□□□□□ -2.31
SCN1BQ07699 MIR4662B-201ENST00000579498 81 ntBASIC0.6□□□□□ -2.31
SCN1BQ07699 AC113195.1-201ENST00000579952 141 ntBASIC0.6□□□□□ -2.31
SCN1BQ07699 MIR4452-201ENST00000583004 71 ntBASIC0.6□□□□□ -2.31
SCN1BQ07699 AL355297.3-201ENST00000604082 446 ntBASIC0.6□□□□□ -2.31
SCN1BQ07699 AC134503.1-201ENST00000633048 54 ntBASIC0.6□□□□□ -2.31
SCN1BQ07699 Y_RNA.16-201ENST00000362421 102 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 Y_RNA.26-201ENST00000362539 101 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 Y_RNA.118-201ENST00000363300 101 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 Y_RNA.217-201ENST00000364214 105 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 Y_RNA.226-201ENST00000364337 114 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 RNU4-10P-201ENST00000364383 140 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 Y_RNA.276-201ENST00000364732 109 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 MIR520F-201ENST00000384824 87 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms