Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 RNA5SP190-201ENST00000365222 118 ntBASIC1.92□□□□□ -2.1
CDC42EP1Q00587 MIR516B2-201ENST00000385190 85 ntBASIC1.92□□□□□ -2.1
CDC42EP1Q00587 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
CDC42EP1Q00587 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
CDC42EP1Q00587 MIR3646-201ENST00000578301 84 ntBASIC1.92□□□□□ -2.1
CDC42EP1Q00587 MIR3618-201ENST00000580330 88 ntBASIC1.92□□□□□ -2.1
CDC42EP1Q00587 MIR3133-201ENST00000583157 78 ntBASIC1.92□□□□□ -2.1
CDC42EP1Q00587 MIR8074-201ENST00000615081 81 ntBASIC1.92□□□□□ -2.1
CDC42EP1Q00587 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.92□□□□□ -2.1
CDC42EP1Q00587 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.91□□□□□ -2.1
CDC42EP1Q00587 RNA5SP259-201ENST00000365541 109 ntBASIC1.91□□□□□ -2.1
CDC42EP1Q00587 RNU6-746P-201ENST00000384112 109 ntBASIC1.91□□□□□ -2.1
CDC42EP1Q00587 MIR548A2-201ENST00000384956 97 ntBASIC1.91□□□□□ -2.1
CDC42EP1Q00587 MIR518F-201ENST00000384973 87 ntBASIC1.91□□□□□ -2.1
CDC42EP1Q00587 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.91□□□□□ -2.1
CDC42EP1Q00587 Y_RNA.703-201ENST00000516846 111 ntBASIC1.91□□□□□ -2.1
CDC42EP1Q00587 AC090142.3-201ENST00000519012 385 ntBASIC1.91□□□□□ -2.1
CDC42EP1Q00587 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
CDC42EP1Q00587 MIR3129-201ENST00000581095 76 ntBASIC1.91□□□□□ -2.1
CDC42EP1Q00587 AC106754.2-201ENST00000623006 233 ntBASIC1.91□□□□□ -2.1
CDC42EP1Q00587 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CDC42EP1Q00587 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
CDC42EP1Q00587 RNU6-457P-201ENST00000363999 107 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 RNU6-818P-201ENST00000364837 108 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 RNU6-1336P-201ENST00000383886 109 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 RNY1P5-201ENST00000383890 115 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 Y_RNA.400-201ENST00000383963 111 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 SNORA1-201ENST00000384107 130 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 RNU6-125P-201ENST00000384505 107 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 Y_RNA.547-201ENST00000384654 119 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 MIR513A1-201ENST00000385138 129 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CDC42EP1Q00587 SNORA75.5-201ENST00000391291 81 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 RNA5SP489-201ENST00000410986 109 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 AL161935.2-201ENST00000414627 60 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.9□□□□□ -2.11
CDC42EP1Q00587 RNA5SP458-201ENST00000516188 119 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 RNU6-346P-201ENST00000516288 111 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 AC103810.8-201ENST00000607347 118 ntBASIC1.9□□□□□ -2.11
CDC42EP1Q00587 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDC42EP1Q00587 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDC42EP1Q00587 SNORD115-28-201ENST00000363931 81 ntBASIC1.89□□□□□ -2.11
CDC42EP1Q00587 RNU6-1082P-201ENST00000364574 107 ntBASIC1.89□□□□□ -2.11
CDC42EP1Q00587 MIR136-201ENST00000385207 82 ntBASIC1.89□□□□□ -2.11
CDC42EP1Q00587 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
CDC42EP1Q00587 RNU6-588P-201ENST00000410281 105 ntBASIC1.89□□□□□ -2.11
CDC42EP1Q00587 HMGN2P38-201ENST00000423806 265 ntBASIC1.89□□□□□ -2.11
CDC42EP1Q00587 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.89□□□□□ -2.11
CDC42EP1Q00587 SNORA18.4-201ENST00000516440 124 ntBASIC1.89□□□□□ -2.11
CDC42EP1Q00587 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.89□□□□□ -2.11
CDC42EP1Q00587 AC112693.2-201ENST00000556538 232 ntBASIC1.89□□□□□ -2.11
CDC42EP1Q00587 AL365205.2-201ENST00000594586 68 ntBASIC1.89□□□□□ -2.11
CDC42EP1Q00587 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
CDC42EP1Q00587 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
CDC42EP1Q00587 Y_RNA.215-201ENST00000364204 112 ntBASIC1.88□□□□□ -2.11
CDC42EP1Q00587 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
CDC42EP1Q00587 Y_RNA.542-201ENST00000384641 111 ntBASIC1.88□□□□□ -2.11
CDC42EP1Q00587 MIR526A1-201ENST00000384897 85 ntBASIC1.88□□□□□ -2.11
CDC42EP1Q00587 MIR513C-201ENST00000401352 84 ntBASIC1.88□□□□□ -2.11
CDC42EP1Q00587 AP000553.5-201ENST00000641933 54 ntBASIC1.88□□□□□ -2.11
CDC42EP1Q00587 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CDC42EP1Q00587 Y_RNA.488-201ENST00000384403 102 ntBASIC1.87□□□□□ -2.11
CDC42EP1Q00587 RNA5SP338-201ENST00000410495 85 ntBASIC1.87□□□□□ -2.11
CDC42EP1Q00587 RNA5SP127-201ENST00000411051 133 ntBASIC1.87□□□□□ -2.11
CDC42EP1Q00587 AL603825.1-201ENST00000438481 80 ntBASIC1.87□□□□□ -2.11
CDC42EP1Q00587 SNORA25.12-201ENST00000516202 82 ntBASIC1.87□□□□□ -2.11
CDC42EP1Q00587 SNORA44.1-201ENST00000517031 108 ntBASIC1.87□□□□□ -2.11
CDC42EP1Q00587 SNORA77B-201ENST00000578179 125 ntBASIC1.87□□□□□ -2.11
CDC42EP1Q00587 MIR548X2-201ENST00000579776 100 ntBASIC1.87□□□□□ -2.11
CDC42EP1Q00587 FAM106DP-201ENST00000586416 501 ntBASIC1.87□□□□□ -2.11
CDC42EP1Q00587 AC134878.1-201ENST00000619901 243 ntBASIC1.87□□□□□ -2.11
CDC42EP1Q00587 MIR30A-201ENST00000385092 71 ntBASIC1.86□□□□□ -2.11
CDC42EP1Q00587 AF228730.3-201ENST00000436691 102 ntBASIC1.86□□□□□ -2.11
CDC42EP1Q00587 RNU6-830P-201ENST00000516353 107 ntBASIC1.86□□□□□ -2.11
CDC42EP1Q00587 MIR8081-201ENST00000611533 95 ntBASIC1.86□□□□□ -2.11
CDC42EP1Q00587 Y_RNA.37-201ENST00000362606 108 ntBASIC1.85□□□□□ -2.11
CDC42EP1Q00587 RNU6-187P-201ENST00000384139 106 ntBASIC1.85□□□□□ -2.11
CDC42EP1Q00587 snoU13.9-201ENST00000458927 103 ntBASIC1.85□□□□□ -2.11
CDC42EP1Q00587 AC005908.1-201ENST00000468701 347 ntBASIC1.85□□□□□ -2.11
CDC42EP1Q00587 RNU4-57P-201ENST00000515980 135 ntBASIC1.85□□□□□ -2.11
CDC42EP1Q00587 RNU6-917P-201ENST00000516294 104 ntBASIC1.85□□□□□ -2.11
CDC42EP1Q00587 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.85□□□□□ -2.11
CDC42EP1Q00587 AL096840.1-201ENST00000603287 93 ntBASIC1.85□□□□□ -2.11
CDC42EP1Q00587 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
CDC42EP1Q00587 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CDC42EP1Q00587 Y_RNA.343-201ENST00000365354 112 ntBASIC1.84□□□□□ -2.11
CDC42EP1Q00587 SNORA2.2-201ENST00000365473 135 ntBASIC1.84□□□□□ -2.11
CDC42EP1Q00587 RNU6-1292P-201ENST00000383856 107 ntBASIC1.84□□□□□ -2.11
CDC42EP1Q00587 MIR624-201ENST00000385217 97 ntBASIC1.84□□□□□ -2.11
CDC42EP1Q00587 SNORD77.3-201ENST00000391113 65 ntBASIC1.84□□□□□ -2.11
CDC42EP1Q00587 SNORD13-201ENST00000459299 104 ntBASIC1.84□□□□□ -2.11
CDC42EP1Q00587 SNORA18.7-201ENST00000516910 131 ntBASIC1.84□□□□□ -2.11
CDC42EP1Q00587 AC015688.6-201ENST00000577737 104 ntBASIC1.84□□□□□ -2.11
CDC42EP1Q00587 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
CDC42EP1Q00587 AL442644.1-201ENST00000454390 3105 ntBASIC1.84□□□□□ -2.12
CDC42EP1Q00587 RNU6-1189P-201ENST00000383958 107 ntBASIC1.83□□□□□ -2.12
CDC42EP1Q00587 Y_RNA.410-201ENST00000383992 113 ntBASIC1.83□□□□□ -2.12
CDC42EP1Q00587 U8.17-201ENST00000391292 132 ntBASIC1.83□□□□□ -2.12
CDC42EP1Q00587 HSPE1P24-201ENST00000450782 238 ntBASIC1.83□□□□□ -2.12
CDC42EP1Q00587 AC092991.1-201ENST00000477176 376 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms