Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 USP9YP30-201ENST00000430729 455 ntBASIC-0.87□□□□□ -2.55
H3F3AP84243 MTND3P21-201ENST00000433774 331 ntBASIC-0.87□□□□□ -2.55
H3F3AP84243 RNU7-66P-201ENST00000459469 62 ntBASIC-0.87□□□□□ -2.55
H3F3AP84243 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.87□□□□□ -2.55
H3F3AP84243 MIR5188-201ENST00000583467 113 ntBASIC-0.87□□□□□ -2.55
H3F3AP84243 AC060780.3-201ENST00000589464 80 ntBASIC-0.87□□□□□ -2.55
H3F3AP84243 AC096720.1-201ENST00000604441 183 ntBASIC-0.87□□□□□ -2.55
H3F3AP84243 AC091931.1-201ENST00000623488 728 ntBASIC-0.87□□□□□ -2.55
H3F3AP84243 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 RNU4-75P-201ENST00000364621 146 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 MIR516B1-201ENST00000385211 90 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 MIR876-201ENST00000401147 81 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 RPL7P42-201ENST00000481005 679 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 RNU7-53P-201ENST00000516705 60 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 RNA5SP169-201ENST00000517268 117 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 Z69908.1-201ENST00000622603 247 ntBASIC-0.88□□□□□ -2.55
H3F3AP84243 RNU6-961P-201ENST00000363893 105 ntBASIC-0.89□□□□□ -2.55
H3F3AP84243 RNU6-35P-201ENST00000384530 107 ntBASIC-0.89□□□□□ -2.55
H3F3AP84243 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.89□□□□□ -2.55
H3F3AP84243 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.89□□□□□ -2.55
H3F3AP84243 RNU6-436P-201ENST00000516171 114 ntBASIC-0.89□□□□□ -2.55
H3F3AP84243 RNU6-758P-201ENST00000516292 89 ntBASIC-0.89□□□□□ -2.55
H3F3AP84243 RNU6-155P-201ENST00000516347 100 ntBASIC-0.89□□□□□ -2.55
H3F3AP84243 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.89□□□□□ -2.55
H3F3AP84243 SNORA25.16-201ENST00000516741 121 ntBASIC-0.89□□□□□ -2.55
H3F3AP84243 AC245884.10-201ENST00000597355 337 ntBASIC-0.89□□□□□ -2.55
H3F3AP84243 RN7SL660P-201ENST00000614852 299 ntBASIC-0.89□□□□□ -2.55
H3F3AP84243 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.9□□□□□ -2.55
H3F3AP84243 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.9□□□□□ -2.55
H3F3AP84243 RN7SKP142-201ENST00000411236 328 ntBASIC-0.9□□□□□ -2.55
H3F3AP84243 BX276092.1-201ENST00000427368 251 ntBASIC-0.9□□□□□ -2.55
H3F3AP84243 RNU6-597P-201ENST00000365620 102 ntBASIC-0.91□□□□□ -2.56
H3F3AP84243 SNORD116-11-201ENST00000383882 92 ntBASIC-0.91□□□□□ -2.56
H3F3AP84243 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.91□□□□□ -2.56
H3F3AP84243 AC096949.1-201ENST00000412047 152 ntBASIC-0.91□□□□□ -2.56
H3F3AP84243 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.91□□□□□ -2.56
H3F3AP84243 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.91□□□□□ -2.56
H3F3AP84243 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.91□□□□□ -2.56
H3F3AP84243 RNU6-437P-201ENST00000459408 95 ntBASIC-0.91□□□□□ -2.56
H3F3AP84243 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.91□□□□□ -2.56
H3F3AP84243 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.91□□□□□ -2.56
H3F3AP84243 RNU6-966P-201ENST00000516479 104 ntBASIC-0.91□□□□□ -2.56
H3F3AP84243 RNA5SP395-201ENST00000516567 118 ntBASIC-0.91□□□□□ -2.56
H3F3AP84243 AP003357.1-201ENST00000604497 148 ntBASIC-0.91□□□□□ -2.56
H3F3AP84243 AC108676.2-201ENST00000605225 163 ntBASIC-0.91□□□□□ -2.56
H3F3AP84243 SNORD95.1-201ENST00000364099 68 ntBASIC-0.92□□□□□ -2.56
H3F3AP84243 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.92□□□□□ -2.56
H3F3AP84243 RNU6-842P-201ENST00000384269 107 ntBASIC-0.92□□□□□ -2.56
H3F3AP84243 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.92□□□□□ -2.56
H3F3AP84243 SNORD110-201ENST00000408189 75 ntBASIC-0.92□□□□□ -2.56
H3F3AP84243 MIR548O-201ENST00000408583 114 ntBASIC-0.92□□□□□ -2.56
H3F3AP84243 RNA5SP237-201ENST00000410414 113 ntBASIC-0.92□□□□□ -2.56
H3F3AP84243 RNU2-11P-201ENST00000459191 187 ntBASIC-0.92□□□□□ -2.56
H3F3AP84243 SCARNA1-201ENST00000517138 166 ntBASIC-0.92□□□□□ -2.56
H3F3AP84243 AC127455.1-201ENST00000565496 145 ntBASIC-0.92□□□□□ -2.56
H3F3AP84243 MIR2681-201ENST00000581814 105 ntBASIC-0.92□□□□□ -2.56
H3F3AP84243 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.93□□□□□ -2.56
H3F3AP84243 RNA5SP25-201ENST00000410815 110 ntBASIC-0.93□□□□□ -2.56
H3F3AP84243 AC006210.1-201ENST00000424882 111 ntBASIC-0.93□□□□□ -2.56
H3F3AP84243 RNU7-104P-201ENST00000459398 79 ntBASIC-0.93□□□□□ -2.56
H3F3AP84243 RNA5SP66-201ENST00000517178 101 ntBASIC-0.93□□□□□ -2.56
H3F3AP84243 RNU1-54P-201ENST00000517181 120 ntBASIC-0.93□□□□□ -2.56
H3F3AP84243 AC007751.1-201ENST00000529260 376 ntBASIC-0.93□□□□□ -2.56
H3F3AP84243 AL662814.1-201ENST00000617364 121 ntBASIC-0.93□□□□□ -2.56
H3F3AP84243 AC068137.3-201ENST00000639191 341 ntBASIC-0.93□□□□□ -2.56
H3F3AP84243 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.94□□□□□ -2.56
H3F3AP84243 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.94□□□□□ -2.56
H3F3AP84243 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.94□□□□□ -2.56
H3F3AP84243 RNU6-926P-201ENST00000384075 107 ntBASIC-0.94□□□□□ -2.56
H3F3AP84243 RNU6-710P-201ENST00000410424 105 ntBASIC-0.94□□□□□ -2.56
H3F3AP84243 SNORD11-201ENST00000459124 84 ntBASIC-0.94□□□□□ -2.56
H3F3AP84243 MTND3P3-201ENST00000505004 126 ntBASIC-0.94□□□□□ -2.56
H3F3AP84243 RNU7-161P-201ENST00000517289 62 ntBASIC-0.94□□□□□ -2.56
H3F3AP84243 AP003072.1-201ENST00000531740 145 ntBASIC-0.94□□□□□ -2.56
H3F3AP84243 AC005014.2-201ENST00000607795 599 ntBASIC-0.94□□□□□ -2.56
H3F3AP84243 AL596211.1-201ENST00000569873 2277 ntBASIC-0.94□□□□□ -2.56
H3F3AP84243 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.95□□□□□ -2.56
H3F3AP84243 SNORD114-14-201ENST00000362723 75 ntBASIC-0.95□□□□□ -2.56
H3F3AP84243 RNU6-674P-201ENST00000363831 107 ntBASIC-0.95□□□□□ -2.56
H3F3AP84243 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.95□□□□□ -2.56
H3F3AP84243 MIR224-201ENST00000384889 81 ntBASIC-0.95□□□□□ -2.56
H3F3AP84243 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.95□□□□□ -2.56
H3F3AP84243 MTND3P7-201ENST00000474435 343 ntBASIC-0.95□□□□□ -2.56
H3F3AP84243 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.95□□□□□ -2.56
H3F3AP84243 RN7SKP298-201ENST00000515950 94 ntBASIC-0.95□□□□□ -2.56
H3F3AP84243 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.96□□□□□ -2.56
H3F3AP84243 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.96□□□□□ -2.56
H3F3AP84243 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.96□□□□□ -2.56
H3F3AP84243 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.96□□□□□ -2.56
H3F3AP84243 MT-TQ-201ENST00000387372 72 ntBASIC-0.96□□□□□ -2.56
H3F3AP84243 RNU7-45P-201ENST00000459460 63 ntBASIC-0.96□□□□□ -2.56
H3F3AP84243 RNU6-470P-201ENST00000515954 104 ntBASIC-0.96□□□□□ -2.56
H3F3AP84243 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.96□□□□□ -2.56
H3F3AP84243 AC018462.2-201ENST00000605375 395 ntBASIC-0.96□□□□□ -2.56
H3F3AP84243 AC073869.9-201ENST00000641610 120 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms