Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 AC004223.1-201ENST00000479840 271 ntBASIC0.98□□□□□ -2.25
SRPXP78539 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.98□□□□□ -2.25
SRPXP78539 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.98□□□□□ -2.25
SRPXP78539 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.98□□□□□ -2.25
SRPXP78539 RNU7-43P-201ENST00000516554 64 ntBASIC0.98□□□□□ -2.25
SRPXP78539 RNU1-92P-201ENST00000517017 135 ntBASIC0.98□□□□□ -2.25
SRPXP78539 MIR3660-201ENST00000584845 100 ntBASIC0.98□□□□□ -2.25
SRPXP78539 AL645939.4-201ENST00000604495 135 ntBASIC0.98□□□□□ -2.25
SRPXP78539 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SRPXP78539 AC008133.2-201ENST00000624540 351 ntBASIC0.98□□□□□ -2.25
SRPXP78539 SNORD61-201ENST00000384252 73 ntBASIC0.97□□□□□ -2.25
SRPXP78539 SNORA25-201ENST00000384384 134 ntBASIC0.97□□□□□ -2.25
SRPXP78539 MIR518F-201ENST00000384973 87 ntBASIC0.97□□□□□ -2.25
SRPXP78539 MIR222-201ENST00000384992 110 ntBASIC0.97□□□□□ -2.25
SRPXP78539 SNORA75.2-201ENST00000391138 150 ntBASIC0.97□□□□□ -2.25
SRPXP78539 SNORA75.3-201ENST00000391231 150 ntBASIC0.97□□□□□ -2.25
SRPXP78539 SNORD58.1-201ENST00000391313 66 ntBASIC0.97□□□□□ -2.25
SRPXP78539 COX6CP14-201ENST00000469580 174 ntBASIC0.97□□□□□ -2.25
SRPXP78539 RPS26P48-201ENST00000491713 339 ntBASIC0.97□□□□□ -2.25
SRPXP78539 AC108210.2-201ENST00000503681 201 ntBASIC0.97□□□□□ -2.25
SRPXP78539 RNU6-1023P-201ENST00000516137 106 ntBASIC0.97□□□□□ -2.25
SRPXP78539 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
SRPXP78539 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.97□□□□□ -2.25
SRPXP78539 Y_RNA.66-201ENST00000362862 102 ntBASIC0.96□□□□□ -2.26
SRPXP78539 SNORD45.3-201ENST00000363836 72 ntBASIC0.96□□□□□ -2.26
SRPXP78539 Y_RNA.199-201ENST00000364014 102 ntBASIC0.96□□□□□ -2.26
SRPXP78539 Y_RNA.242-201ENST00000364473 110 ntBASIC0.96□□□□□ -2.26
SRPXP78539 SNORA20.1-201ENST00000364790 130 ntBASIC0.96□□□□□ -2.26
SRPXP78539 Y_RNA.478-201ENST00000384358 107 ntBASIC0.96□□□□□ -2.26
SRPXP78539 Y_RNA.494-201ENST00000384432 111 ntBASIC0.96□□□□□ -2.26
SRPXP78539 MIR764-201ENST00000390811 85 ntBASIC0.96□□□□□ -2.26
SRPXP78539 Y_RNA.626-201ENST00000411288 95 ntBASIC0.96□□□□□ -2.26
SRPXP78539 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
SRPXP78539 SNORA31.4-201ENST00000516049 129 ntBASIC0.96□□□□□ -2.26
SRPXP78539 RNU6-693P-201ENST00000516134 107 ntBASIC0.96□□□□□ -2.26
SRPXP78539 RNU6-1299P-201ENST00000516316 100 ntBASIC0.96□□□□□ -2.26
SRPXP78539 SNORA70.22-201ENST00000517160 124 ntBASIC0.96□□□□□ -2.26
SRPXP78539 AC015712.3-201ENST00000559380 164 ntBASIC0.96□□□□□ -2.26
SRPXP78539 MIR4662B-201ENST00000579498 81 ntBASIC0.96□□□□□ -2.26
SRPXP78539 MIR4308-201ENST00000580634 81 ntBASIC0.96□□□□□ -2.26
SRPXP78539 PRELID3BP2-201ENST00000605362 201 ntBASIC0.96□□□□□ -2.26
SRPXP78539 RNU2-4P-201ENST00000606190 192 ntBASIC0.96□□□□□ -2.26
SRPXP78539 RNU1-17P-201ENST00000363022 152 ntBASIC0.95□□□□□ -2.26
SRPXP78539 Y_RNA.634-201ENST00000364811 113 ntBASIC0.95□□□□□ -2.26
SRPXP78539 Y_RNA.432-201ENST00000384087 111 ntBASIC0.95□□□□□ -2.26
SRPXP78539 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.95□□□□□ -2.26
SRPXP78539 RNU6-938P-201ENST00000411285 103 ntBASIC0.95□□□□□ -2.26
SRPXP78539 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
SRPXP78539 SNORD79.1-201ENST00000516069 84 ntBASIC0.95□□□□□ -2.26
SRPXP78539 RNU6-365P-201ENST00000517113 106 ntBASIC0.95□□□□□ -2.26
SRPXP78539 AP003716.2-201ENST00000528260 108 ntBASIC0.95□□□□□ -2.26
SRPXP78539 AC004817.2-201ENST00000561794 651 ntBASIC0.95□□□□□ -2.26
SRPXP78539 AC104984.5-201ENST00000586878 94 ntBASIC0.95□□□□□ -2.26
SRPXP78539 AC027335.2-201ENST00000624030 375 ntBASIC0.95□□□□□ -2.26
SRPXP78539 MIR4251-201ENST00000635819 61 ntBASIC0.95□□□□□ -2.26
SRPXP78539 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SRPXP78539 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.94□□□□□ -2.26
SRPXP78539 MIR103A2-201ENST00000362154 78 ntBASIC0.94□□□□□ -2.26
SRPXP78539 RNA5SP264-201ENST00000363115 107 ntBASIC0.94□□□□□ -2.26
SRPXP78539 Y_RNA.370-201ENST00000365589 108 ntBASIC0.94□□□□□ -2.26
SRPXP78539 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SRPXP78539 MIR1185-1-201ENST00000408598 86 ntBASIC0.94□□□□□ -2.26
SRPXP78539 RNU2-70P-201ENST00000410718 179 ntBASIC0.94□□□□□ -2.26
SRPXP78539 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.94□□□□□ -2.26
SRPXP78539 AC009474.2-201ENST00000451383 136 ntBASIC0.94□□□□□ -2.26
SRPXP78539 RPS29P29-201ENST00000456396 171 ntBASIC0.94□□□□□ -2.26
SRPXP78539 RNU4-71P-201ENST00000516258 113 ntBASIC0.94□□□□□ -2.26
SRPXP78539 SNORD36C-201ENST00000516733 66 ntBASIC0.94□□□□□ -2.26
SRPXP78539 AC109810.1-201ENST00000534066 224 ntBASIC0.94□□□□□ -2.26
SRPXP78539 MIR6715A-201ENST00000615929 79 ntBASIC0.94□□□□□ -2.26
SRPXP78539 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
SRPXP78539 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
SRPXP78539 Y_RNA.23-201ENST00000362496 106 ntBASIC0.93□□□□□ -2.26
SRPXP78539 RNU6-888P-201ENST00000363010 101 ntBASIC0.93□□□□□ -2.26
SRPXP78539 SNORD115-28-201ENST00000363931 81 ntBASIC0.93□□□□□ -2.26
SRPXP78539 Y_RNA.241-201ENST00000364470 117 ntBASIC0.93□□□□□ -2.26
SRPXP78539 SNORA25.8-201ENST00000364831 128 ntBASIC0.93□□□□□ -2.26
SRPXP78539 SNORD24-201ENST00000383884 75 ntBASIC0.93□□□□□ -2.26
SRPXP78539 RNY3P5-201ENST00000384127 102 ntBASIC0.93□□□□□ -2.26
SRPXP78539 RNU6-482P-201ENST00000391068 107 ntBASIC0.93□□□□□ -2.26
SRPXP78539 MIR1302-7-201ENST00000408841 72 ntBASIC0.93□□□□□ -2.26
SRPXP78539 RNU7-40P-201ENST00000516397 64 ntBASIC0.93□□□□□ -2.26
SRPXP78539 MIR4791-201ENST00000607666 84 ntBASIC0.93□□□□□ -2.26
SRPXP78539 MTND1P7-201ENST00000632801 297 ntBASIC0.93□□□□□ -2.26
SRPXP78539 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
SRPXP78539 AC008163.1-202ENST00000636004 2889 ntBASIC0.92□□□□□ -2.26
SRPXP78539 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SRPXP78539 Y_RNA.37-201ENST00000362606 108 ntBASIC0.92□□□□□ -2.26
SRPXP78539 RNA5SP48-201ENST00000363969 126 ntBASIC0.92□□□□□ -2.26
SRPXP78539 Y_RNA.330-201ENST00000365230 109 ntBASIC0.92□□□□□ -2.26
SRPXP78539 SNORA22-201ENST00000383907 134 ntBASIC0.92□□□□□ -2.26
SRPXP78539 SNORA1-201ENST00000384107 130 ntBASIC0.92□□□□□ -2.26
SRPXP78539 SNORA51.10-201ENST00000384418 136 ntBASIC0.92□□□□□ -2.26
SRPXP78539 SNORA22C-201ENST00000384614 134 ntBASIC0.92□□□□□ -2.26
SRPXP78539 RNU2-55P-201ENST00000411146 174 ntBASIC0.92□□□□□ -2.26
SRPXP78539 AF228730.3-201ENST00000436691 102 ntBASIC0.92□□□□□ -2.26
SRPXP78539 RNU2-13P-201ENST00000515909 113 ntBASIC0.92□□□□□ -2.26
SRPXP78539 RNA5SP404-201ENST00000517118 132 ntBASIC0.92□□□□□ -2.26
SRPXP78539 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SRPXP78539 MIR548AO-201ENST00000579992 96 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 871.4 ms