Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SNORA2.2-201ENST00000365473 135 ntBASIC1.18□□□□□ -2.22
IRX4P78413 RNU6-463P-201ENST00000384340 107 ntBASIC1.18□□□□□ -2.22
IRX4P78413 SNORA8.3-201ENST00000384679 139 ntBASIC1.18□□□□□ -2.22
IRX4P78413 SNORD41-201ENST00000386967 70 ntBASIC1.18□□□□□ -2.22
IRX4P78413 MIR526A2-201ENST00000390198 65 ntBASIC1.18□□□□□ -2.22
IRX4P78413 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.18□□□□□ -2.22
IRX4P78413 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.18□□□□□ -2.22
IRX4P78413 AC087343.1-201ENST00000477341 475 ntBASIC1.18□□□□□ -2.22
IRX4P78413 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.18□□□□□ -2.22
IRX4P78413 RNA5SP436-201ENST00000516020 115 ntBASIC1.18□□□□□ -2.22
IRX4P78413 AC090049.2-201ENST00000550377 109 ntBASIC1.18□□□□□ -2.22
IRX4P78413 AC008507.4-201ENST00000585464 127 ntBASIC1.18□□□□□ -2.22
IRX4P78413 AL049861.1-201ENST00000603130 150 ntBASIC1.18□□□□□ -2.22
IRX4P78413 AL021707.8-201ENST00000609428 183 ntBASIC1.18□□□□□ -2.22
IRX4P78413 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
IRX4P78413 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
IRX4P78413 Y_RNA.24-201ENST00000362508 103 ntBASIC1.17□□□□□ -2.22
IRX4P78413 Y_RNA.205-201ENST00000364128 113 ntBASIC1.17□□□□□ -2.22
IRX4P78413 Y_RNA.336-201ENST00000365307 109 ntBASIC1.17□□□□□ -2.22
IRX4P78413 RNU6-442P-201ENST00000383968 104 ntBASIC1.17□□□□□ -2.22
IRX4P78413 Y_RNA.416-201ENST00000384014 113 ntBASIC1.17□□□□□ -2.22
IRX4P78413 Y_RNA.572-201ENST00000384757 98 ntBASIC1.17□□□□□ -2.22
IRX4P78413 MIR653-201ENST00000385279 96 ntBASIC1.17□□□□□ -2.22
IRX4P78413 SNORD72-201ENST00000390994 80 ntBASIC1.17□□□□□ -2.22
IRX4P78413 AC023449.1-201ENST00000454464 154 ntBASIC1.17□□□□□ -2.22
IRX4P78413 SNORD116-28-201ENST00000516123 91 ntBASIC1.17□□□□□ -2.22
IRX4P78413 AC090142.3-201ENST00000519012 385 ntBASIC1.17□□□□□ -2.22
IRX4P78413 MIR4282-201ENST00000583613 67 ntBASIC1.17□□□□□ -2.22
IRX4P78413 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.17□□□□□ -2.22
IRX4P78413 Y_RNA.60-201ENST00000362831 98 ntBASIC1.16□□□□□ -2.22
IRX4P78413 Y_RNA.76-201ENST00000362931 109 ntBASIC1.16□□□□□ -2.22
IRX4P78413 Y_RNA.307-201ENST00000365022 117 ntBASIC1.16□□□□□ -2.22
IRX4P78413 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
IRX4P78413 RNA5SP496-201ENST00000391240 109 ntBASIC1.16□□□□□ -2.22
IRX4P78413 MTND1P19-201ENST00000511780 315 ntBASIC1.16□□□□□ -2.22
IRX4P78413 Y_RNA.680-201ENST00000516441 93 ntBASIC1.16□□□□□ -2.22
IRX4P78413 RNU6-113P-201ENST00000516653 101 ntBASIC1.16□□□□□ -2.22
IRX4P78413 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.16□□□□□ -2.22
IRX4P78413 MIR3128-201ENST00000581957 66 ntBASIC1.16□□□□□ -2.22
IRX4P78413 AL513534.2-201ENST00000603836 250 ntBASIC1.16□□□□□ -2.22
IRX4P78413 BX284668.6-201ENST00000606899 438 ntBASIC1.16□□□□□ -2.22
IRX4P78413 AL442067.1-201ENST00000613261 223 ntBASIC1.16□□□□□ -2.22
IRX4P78413 Y_RNA.229-201ENST00000364347 113 ntBASIC1.15□□□□□ -2.23
IRX4P78413 Y_RNA.304-201ENST00000365011 112 ntBASIC1.15□□□□□ -2.23
IRX4P78413 AL591704.2-201ENST00000421658 181 ntBASIC1.15□□□□□ -2.23
IRX4P78413 AC245047.8-201ENST00000456455 284 ntBASIC1.15□□□□□ -2.23
IRX4P78413 RPS23P4-201ENST00000487908 423 ntBASIC1.15□□□□□ -2.23
IRX4P78413 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.15□□□□□ -2.23
IRX4P78413 SNORD111.1-201ENST00000516421 86 ntBASIC1.15□□□□□ -2.23
IRX4P78413 RNU6-1007P-201ENST00000516586 107 ntBASIC1.15□□□□□ -2.23
IRX4P78413 RNU7-149P-201ENST00000516739 59 ntBASIC1.15□□□□□ -2.23
IRX4P78413 GHRLOS.1-201ENST00000610995 70 ntBASIC1.15□□□□□ -2.23
IRX4P78413 uc_338.4-201ENST00000616635 176 ntBASIC1.15□□□□□ -2.23
IRX4P78413 AL365265.1-201ENST00000621045 234 ntBASIC1.15□□□□□ -2.23
IRX4P78413 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
IRX4P78413 Y_RNA.65-201ENST00000362846 100 ntBASIC1.14□□□□□ -2.23
IRX4P78413 RNU6-939P-201ENST00000384634 107 ntBASIC1.14□□□□□ -2.23
IRX4P78413 Y_RNA.539-201ENST00000384635 107 ntBASIC1.14□□□□□ -2.23
IRX4P78413 MIR626-201ENST00000385032 94 ntBASIC1.14□□□□□ -2.23
IRX4P78413 MIR136-201ENST00000385207 82 ntBASIC1.14□□□□□ -2.23
IRX4P78413 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.14□□□□□ -2.23
IRX4P78413 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
IRX4P78413 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.14□□□□□ -2.23
IRX4P78413 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
IRX4P78413 Y_RNA.20-201ENST00000362479 113 ntBASIC1.13□□□□□ -2.23
IRX4P78413 RNU6-268P-201ENST00000364174 107 ntBASIC1.13□□□□□ -2.23
IRX4P78413 Y_RNA.292-201ENST00000364904 97 ntBASIC1.13□□□□□ -2.23
IRX4P78413 Y_RNA.447-201ENST00000384184 113 ntBASIC1.13□□□□□ -2.23
IRX4P78413 SNORD38C-201ENST00000384381 69 ntBASIC1.13□□□□□ -2.23
IRX4P78413 MIR15B-201ENST00000385045 98 ntBASIC1.13□□□□□ -2.23
IRX4P78413 Y_RNA.587-201ENST00000391210 103 ntBASIC1.13□□□□□ -2.23
IRX4P78413 SNRPGP14-201ENST00000435400 219 ntBASIC1.13□□□□□ -2.23
IRX4P78413 RNU6-947P-201ENST00000516264 106 ntBASIC1.13□□□□□ -2.23
IRX4P78413 SNORA18.7-201ENST00000516910 131 ntBASIC1.13□□□□□ -2.23
IRX4P78413 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.13□□□□□ -2.23
IRX4P78413 AC004817.2-201ENST00000561794 651 ntBASIC1.13□□□□□ -2.23
IRX4P78413 MIR5688-201ENST00000580619 83 ntBASIC1.13□□□□□ -2.23
IRX4P78413 AL357312.1-201ENST00000603879 298 ntBASIC1.13□□□□□ -2.23
IRX4P78413 AC015726.2-201ENST00000620112 122 ntBASIC1.13□□□□□ -2.23
IRX4P78413 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.13□□□□□ -2.23
IRX4P78413 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
IRX4P78413 RNU6-653P-201ENST00000363074 106 ntBASIC1.12□□□□□ -2.23
IRX4P78413 snoU2_19.4-201ENST00000364329 80 ntBASIC1.12□□□□□ -2.23
IRX4P78413 Y_RNA.242-201ENST00000364473 110 ntBASIC1.12□□□□□ -2.23
IRX4P78413 RNU4-17P-201ENST00000365598 141 ntBASIC1.12□□□□□ -2.23
IRX4P78413 SNORA22-201ENST00000383907 134 ntBASIC1.12□□□□□ -2.23
IRX4P78413 Y_RNA.393-201ENST00000383936 102 ntBASIC1.12□□□□□ -2.23
IRX4P78413 Y_RNA.478-201ENST00000384358 107 ntBASIC1.12□□□□□ -2.23
IRX4P78413 SNORA25-201ENST00000384384 134 ntBASIC1.12□□□□□ -2.23
IRX4P78413 SNORA22C-201ENST00000384614 134 ntBASIC1.12□□□□□ -2.23
IRX4P78413 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.12□□□□□ -2.23
IRX4P78413 MRPL35P3-201ENST00000421557 364 ntBASIC1.12□□□□□ -2.23
IRX4P78413 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.12□□□□□ -2.23
IRX4P78413 RNU6-1023P-201ENST00000516137 106 ntBASIC1.12□□□□□ -2.23
IRX4P78413 SNORD77.4-201ENST00000516158 81 ntBASIC1.12□□□□□ -2.23
IRX4P78413 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
IRX4P78413 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
IRX4P78413 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.12□□□□□ -2.23
IRX4P78413 AC011921.3-201ENST00000605540 361 ntBASIC1.12□□□□□ -2.23
IRX4P78413 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms