Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-917P-201ENST00000516294 104 ntBASIC1.63□□□□□ -2.15
RAE1P78406 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.63□□□□□ -2.15
RAE1P78406 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.63□□□□□ -2.15
RAE1P78406 AC134878.1-201ENST00000619901 243 ntBASIC1.63□□□□□ -2.15
RAE1P78406 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
RAE1P78406 AC106754.2-201ENST00000623006 233 ntBASIC1.63□□□□□ -2.15
RAE1P78406 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
RAE1P78406 SNORA1-201ENST00000384107 130 ntBASIC1.62□□□□□ -2.15
RAE1P78406 MIR583-201ENST00000384846 75 ntBASIC1.62□□□□□ -2.15
RAE1P78406 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.62□□□□□ -2.15
RAE1P78406 AC087499.4-201ENST00000448505 178 ntBASIC1.62□□□□□ -2.15
RAE1P78406 AC090049.2-201ENST00000550377 109 ntBASIC1.62□□□□□ -2.15
RAE1P78406 MIR6845-201ENST00000613182 61 ntBASIC1.62□□□□□ -2.15
RAE1P78406 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.62□□□□□ -2.15
RAE1P78406 MIR6844-201ENST00000637122 62 ntBASIC1.62□□□□□ -2.15
RAE1P78406 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RAE1P78406 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
RAE1P78406 RNU6-151P-201ENST00000364158 107 ntBASIC1.61□□□□□ -2.15
RAE1P78406 RNU4-11P-201ENST00000365287 132 ntBASIC1.61□□□□□ -2.15
RAE1P78406 Y_RNA.400-201ENST00000383963 111 ntBASIC1.61□□□□□ -2.15
RAE1P78406 Y_RNA.410-201ENST00000383992 113 ntBASIC1.61□□□□□ -2.15
RAE1P78406 MIR624-201ENST00000385217 97 ntBASIC1.61□□□□□ -2.15
RAE1P78406 SNORD37.2-201ENST00000391075 66 ntBASIC1.61□□□□□ -2.15
RAE1P78406 RNA5SP127-201ENST00000411051 133 ntBASIC1.61□□□□□ -2.15
RAE1P78406 RNU6-322P-201ENST00000516010 103 ntBASIC1.61□□□□□ -2.15
RAE1P78406 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.61□□□□□ -2.15
RAE1P78406 RNU6-250P-201ENST00000516958 103 ntBASIC1.61□□□□□ -2.15
RAE1P78406 MIR3129-201ENST00000581095 76 ntBASIC1.61□□□□□ -2.15
RAE1P78406 MIR3945-201ENST00000581853 98 ntBASIC1.61□□□□□ -2.15
RAE1P78406 FAM106DP-201ENST00000586416 501 ntBASIC1.61□□□□□ -2.15
RAE1P78406 Y_RNA.37-201ENST00000362606 108 ntBASIC1.6□□□□□ -2.15
RAE1P78406 RNU6-746P-201ENST00000384112 109 ntBASIC1.6□□□□□ -2.15
RAE1P78406 Y_RNA.506-201ENST00000384494 102 ntBASIC1.6□□□□□ -2.15
RAE1P78406 SNORD77.3-201ENST00000391113 65 ntBASIC1.6□□□□□ -2.15
RAE1P78406 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.6□□□□□ -2.15
RAE1P78406 AF228730.3-201ENST00000436691 102 ntBASIC1.6□□□□□ -2.15
RAE1P78406 AC008834.1-201ENST00000511612 175 ntBASIC1.6□□□□□ -2.15
RAE1P78406 Y_RNA.703-201ENST00000516846 111 ntBASIC1.6□□□□□ -2.15
RAE1P78406 MIR8081-201ENST00000611533 95 ntBASIC1.6□□□□□ -2.15
RAE1P78406 MIR8063-201ENST00000621930 81 ntBASIC1.6□□□□□ -2.15
RAE1P78406 SNORD33-201ENST00000362761 85 ntBASIC1.59□□□□□ -2.15
RAE1P78406 RNU6-818P-201ENST00000364837 108 ntBASIC1.59□□□□□ -2.15
RAE1P78406 AL451046.2-201ENST00000403074 277 ntBASIC1.59□□□□□ -2.15
RAE1P78406 AL603908.1-201ENST00000406098 201 ntBASIC1.59□□□□□ -2.15
RAE1P78406 SUMO1P3-201ENST00000439961 304 ntBASIC1.59□□□□□ -2.15
RAE1P78406 HSPE1P24-201ENST00000450782 238 ntBASIC1.59□□□□□ -2.15
RAE1P78406 SNORA18.4-201ENST00000516440 124 ntBASIC1.59□□□□□ -2.15
RAE1P78406 SNORA74.3-201ENST00000517108 154 ntBASIC1.59□□□□□ -2.15
RAE1P78406 AC112693.2-201ENST00000556538 232 ntBASIC1.59□□□□□ -2.15
RAE1P78406 MIR5197-201ENST00000583721 112 ntBASIC1.59□□□□□ -2.15
RAE1P78406 AL513534.2-201ENST00000603836 250 ntBASIC1.59□□□□□ -2.15
RAE1P78406 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.59□□□□□ -2.15
RAE1P78406 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.59□□□□□ -2.15
RAE1P78406 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RAE1P78406 Y_RNA.215-201ENST00000364204 112 ntBASIC1.58□□□□□ -2.16
RAE1P78406 RNU6-1082P-201ENST00000364574 107 ntBASIC1.58□□□□□ -2.16
RAE1P78406 SNORA1.2-201ENST00000365189 134 ntBASIC1.58□□□□□ -2.16
RAE1P78406 RNU6-1336P-201ENST00000383886 109 ntBASIC1.58□□□□□ -2.16
RAE1P78406 RNU6-1189P-201ENST00000383958 107 ntBASIC1.58□□□□□ -2.16
RAE1P78406 RNU6-125P-201ENST00000384505 107 ntBASIC1.58□□□□□ -2.16
RAE1P78406 U8.17-201ENST00000391292 132 ntBASIC1.58□□□□□ -2.16
RAE1P78406 RNU6-938P-201ENST00000411285 103 ntBASIC1.58□□□□□ -2.16
RAE1P78406 SNORD123-201ENST00000459473 70 ntBASIC1.58□□□□□ -2.16
RAE1P78406 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.58□□□□□ -2.16
RAE1P78406 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.58□□□□□ -2.16
RAE1P78406 AC012493.3-201ENST00000604494 112 ntBASIC1.58□□□□□ -2.16
RAE1P78406 WWP1P1-201ENST00000466609 2769 ntBASIC1.58□□□□□ -2.16
RAE1P78406 SNORD115-34-201ENST00000362441 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-12-201ENST00000362583 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-29-201ENST00000362834 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-9-201ENST00000362912 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-21-201ENST00000362963 81 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-14-201ENST00000363090 81 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-13-201ENST00000363358 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-41-201ENST00000363608 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-11-201ENST00000363616 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-5-201ENST00000363633 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-39-201ENST00000363694 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-4-201ENST00000363810 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-16-201ENST00000363887 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-6-201ENST00000363942 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-42-201ENST00000364273 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-15-201ENST00000364809 81 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-1-201ENST00000364961 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-26-201ENST00000365067 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-10-201ENST00000365073 81 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-43-201ENST00000365503 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-36-201ENST00000365629 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 MIR548M-201ENST00000408260 86 ntBASIC1.57□□□□□ -2.16
RAE1P78406 MIR1261-201ENST00000408659 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 RNU6-588P-201ENST00000410281 105 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD36C-201ENST00000516733 66 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORA18.7-201ENST00000516910 131 ntBASIC1.57□□□□□ -2.16
RAE1P78406 RNU7-181P-201ENST00000517234 74 ntBASIC1.57□□□□□ -2.16
RAE1P78406 AP003484.1-201ENST00000530974 250 ntBASIC1.57□□□□□ -2.16
RAE1P78406 MIR548X2-201ENST00000579776 100 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD115-40-201ENST00000606510 82 ntBASIC1.57□□□□□ -2.16
RAE1P78406 AL365434.2-201ENST00000607979 234 ntBASIC1.57□□□□□ -2.16
RAE1P78406 SNORD1A-201ENST00000364968 72 ntBASIC1.56□□□□□ -2.16
RAE1P78406 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms