Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SNORA31.4-201ENST00000516049 129 ntBASIC2.59□□□□□ -1.99
CHMP4BP1P59074 Y_RNA.714-201ENST00000517065 90 ntBASIC2.59□□□□□ -1.99
CHMP4BP1P59074 RNA5SP437-201ENST00000517249 129 ntBASIC2.59□□□□□ -1.99
CHMP4BP1P59074 AC025166.1-201ENST00000612411 163 ntBASIC2.59□□□□□ -1.99
CHMP4BP1P59074 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CHMP4BP1P59074 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
CHMP4BP1P59074 MTND5P18-201ENST00000445624 1801 ntBASIC2.58□□□□□ -2
CHMP4BP1P59074 AL442644.1-201ENST00000454390 3105 ntBASIC2.58□□□□□ -2
CHMP4BP1P59074 MIR520A-201ENST00000384862 85 ntBASIC2.58□□□□□ -2
CHMP4BP1P59074 MIR548A1-201ENST00000385041 97 ntBASIC2.58□□□□□ -2
CHMP4BP1P59074 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.58□□□□□ -2
CHMP4BP1P59074 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.58□□□□□ -2
CHMP4BP1P59074 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.58□□□□□ -2
CHMP4BP1P59074 SNORD115-28-201ENST00000363931 81 ntBASIC2.57□□□□□ -2
CHMP4BP1P59074 SNORA67.3-201ENST00000384366 140 ntBASIC2.57□□□□□ -2
CHMP4BP1P59074 Y_RNA.494-201ENST00000384432 111 ntBASIC2.57□□□□□ -2
CHMP4BP1P59074 MIR1263-201ENST00000408324 86 ntBASIC2.57□□□□□ -2
CHMP4BP1P59074 AL591806.2-201ENST00000433122 173 ntBASIC2.57□□□□□ -2
CHMP4BP1P59074 RNU6-240P-201ENST00000516098 97 ntBASIC2.57□□□□□ -2
CHMP4BP1P59074 AL670379.3-201ENST00000605040 251 ntBASIC2.57□□□□□ -2
CHMP4BP1P59074 AC134878.1-201ENST00000619901 243 ntBASIC2.57□□□□□ -2
CHMP4BP1P59074 AC015726.2-201ENST00000620112 122 ntBASIC2.57□□□□□ -2
CHMP4BP1P59074 AC008555.8-201ENST00000623602 2168 ntBASIC2.57□□□□□ -2
CHMP4BP1P59074 Y_RNA.440-201ENST00000384120 114 ntBASIC2.56□□□□□ -2
CHMP4BP1P59074 SNORA64-201ENST00000384674 134 ntBASIC2.56□□□□□ -2
CHMP4BP1P59074 MIR802-201ENST00000390235 94 ntBASIC2.56□□□□□ -2
CHMP4BP1P59074 MIR764-201ENST00000390811 85 ntBASIC2.56□□□□□ -2
CHMP4BP1P59074 RNA5SP212-201ENST00000391223 107 ntBASIC2.56□□□□□ -2
CHMP4BP1P59074 AL445646.1-201ENST00000431784 216 ntBASIC2.56□□□□□ -2
CHMP4BP1P59074 RPL23AP63-201ENST00000498752 471 ntBASIC2.56□□□□□ -2
CHMP4BP1P59074 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.56□□□□□ -2
CHMP4BP1P59074 SCARNA16.3-201ENST00000516595 184 ntBASIC2.56□□□□□ -2
CHMP4BP1P59074 RNU7-28P-201ENST00000516759 62 ntBASIC2.56□□□□□ -2
CHMP4BP1P59074 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.56□□□□□ -2
CHMP4BP1P59074 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CHMP4BP1P59074 MIRLET7G-201ENST00000362280 84 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 RNU6-349P-201ENST00000362402 107 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 RNU6-755P-201ENST00000364400 103 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 Y_RNA.336-201ENST00000365307 109 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 SNORA2.2-201ENST00000365473 135 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 SNORA22-201ENST00000383907 134 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 RNU6-1189P-201ENST00000383958 107 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 RNU6-424P-201ENST00000384367 105 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 MIR221-201ENST00000385135 110 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 MTATP6P21-201ENST00000440681 189 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.55□□□□□ -2
CHMP4BP1P59074 HSPE1P19-201ENST00000603327 295 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 AC067747.1-201ENST00000608026 250 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 MIR203B-201ENST00000636080 86 ntBASIC2.55□□□□□ -2
CHMP4BP1P59074 Y_RNA.410-201ENST00000383992 113 ntBASIC2.54□□□□□ -2
CHMP4BP1P59074 RNU6-163P-201ENST00000384396 106 ntBASIC2.54□□□□□ -2
CHMP4BP1P59074 SNORD116-21-201ENST00000384507 92 ntBASIC2.54□□□□□ -2
CHMP4BP1P59074 MIR548A3-201ENST00000385297 97 ntBASIC2.54□□□□□ -2
CHMP4BP1P59074 MT-TI-201ENST00000387365 69 ntBASIC2.54□□□□□ -2
CHMP4BP1P59074 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.54□□□□□ -2
CHMP4BP1P59074 Y_RNA.649-201ENST00000459077 103 ntBASIC2.54□□□□□ -2
CHMP4BP1P59074 AC108210.2-201ENST00000503681 201 ntBASIC2.54□□□□□ -2
CHMP4BP1P59074 RNU6-237P-201ENST00000515985 71 ntBASIC2.54□□□□□ -2
CHMP4BP1P59074 RNA5SP168-201ENST00000516642 112 ntBASIC2.54□□□□□ -2
CHMP4BP1P59074 AL773524.1-201ENST00000614065 229 ntBASIC2.54□□□□□ -2
CHMP4BP1P59074 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHMP4BP1P59074 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.54□□□□□ -2
CHMP4BP1P59074 RNA5SP99-201ENST00000364020 114 ntBASIC2.53□□□□□ -2
CHMP4BP1P59074 RNU2-7P-201ENST00000410794 178 ntBASIC2.53□□□□□ -2
CHMP4BP1P59074 AC099513.1-201ENST00000490423 301 ntBASIC2.53□□□□□ -2
CHMP4BP1P59074 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.53□□□□□ -2
CHMP4BP1P59074 MIR6895-201ENST00000613497 78 ntBASIC2.53□□□□□ -2
CHMP4BP1P59074 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHMP4BP1P59074 SNORD114-1-201ENST00000362705 72 ntBASIC2.52□□□□□ -2.01
CHMP4BP1P59074 Y_RNA.528-201ENST00000384575 108 ntBASIC2.52□□□□□ -2.01
CHMP4BP1P59074 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
CHMP4BP1P59074 AC093850.1-201ENST00000454121 251 ntBASIC2.52□□□□□ -2.01
CHMP4BP1P59074 RNA5SP57-201ENST00000459463 123 ntBASIC2.52□□□□□ -2.01
CHMP4BP1P59074 RPS26P48-201ENST00000491713 339 ntBASIC2.52□□□□□ -2.01
CHMP4BP1P59074 CYCTP-201ENST00000504253 315 ntBASIC2.52□□□□□ -2.01
CHMP4BP1P59074 AP003484.1-201ENST00000530974 250 ntBASIC2.52□□□□□ -2.01
CHMP4BP1P59074 AC015712.3-201ENST00000559380 164 ntBASIC2.52□□□□□ -2.01
CHMP4BP1P59074 AL137067.1-201ENST00000615933 120 ntBASIC2.52□□□□□ -2.01
CHMP4BP1P59074 AL121890.5-201ENST00000620848 304 ntBASIC2.52□□□□□ -2.01
CHMP4BP1P59074 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CHMP4BP1P59074 Y_RNA.242-201ENST00000364473 110 ntBASIC2.51□□□□□ -2.01
CHMP4BP1P59074 RNU6-1031P-201ENST00000384773 107 ntBASIC2.51□□□□□ -2.01
CHMP4BP1P59074 AC104435.1-201ENST00000483483 166 ntBASIC2.51□□□□□ -2.01
CHMP4BP1P59074 SNORA31.17-201ENST00000516953 127 ntBASIC2.51□□□□□ -2.01
CHMP4BP1P59074 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.51□□□□□ -2.01
CHMP4BP1P59074 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.51□□□□□ -2.01
CHMP4BP1P59074 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.51□□□□□ -2.01
CHMP4BP1P59074 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CHMP4BP1P59074 RNU6-147P-201ENST00000383983 107 ntBASIC2.5□□□□□ -2.01
CHMP4BP1P59074 Y_RNA.549-201ENST00000384657 102 ntBASIC2.5□□□□□ -2.01
CHMP4BP1P59074 AL023284.1-201ENST00000403956 276 ntBASIC2.5□□□□□ -2.01
CHMP4BP1P59074 AC015922.2-201ENST00000435593 184 ntBASIC2.5□□□□□ -2.01
CHMP4BP1P59074 RNU6-113P-201ENST00000516653 101 ntBASIC2.5□□□□□ -2.01
CHMP4BP1P59074 RNA5SP481-201ENST00000516814 122 ntBASIC2.5□□□□□ -2.01
CHMP4BP1P59074 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.5□□□□□ -2.01
CHMP4BP1P59074 AC021506.2-201ENST00000612354 169 ntBASIC2.5□□□□□ -2.01
CHMP4BP1P59074 AC027279.3-201ENST00000625055 122 ntBASIC2.5□□□□□ -2.01
CHMP4BP1P59074 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.49□□□□□ -2.01
CHMP4BP1P59074 Y_RNA.346-201ENST00000365385 112 ntBASIC2.49□□□□□ -2.01
CHMP4BP1P59074 SNORA6-201ENST00000384033 151 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms