Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL109933.3-201ENST00000619095 188 ntBASIC0.25□□□□□ -2.37
VSX2P58304 AC022140.2-201ENST00000623500 188 ntBASIC0.25□□□□□ -2.37
VSX2P58304 SNORA1.2-201ENST00000365189 134 ntBASIC0.24□□□□□ -2.37
VSX2P58304 RNU6-913P-201ENST00000390913 95 ntBASIC0.24□□□□□ -2.37
VSX2P58304 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.24□□□□□ -2.37
VSX2P58304 AL160004.2-201ENST00000432935 350 ntBASIC0.24□□□□□ -2.37
VSX2P58304 Y_RNA.632-201ENST00000459189 102 ntBASIC0.24□□□□□ -2.37
VSX2P58304 Y_RNA.666-201ENST00000516187 112 ntBASIC0.24□□□□□ -2.37
VSX2P58304 RNU6-191P-201ENST00000516295 94 ntBASIC0.24□□□□□ -2.37
VSX2P58304 RNU6-958P-201ENST00000516995 106 ntBASIC0.24□□□□□ -2.37
VSX2P58304 MIR4264-201ENST00000583520 66 ntBASIC0.24□□□□□ -2.37
VSX2P58304 RPS29P30-201ENST00000600975 111 ntBASIC0.24□□□□□ -2.37
VSX2P58304 AC023932.2-201ENST00000603176 175 ntBASIC0.24□□□□□ -2.37
VSX2P58304 AL132765.2-201ENST00000610812 351 ntBASIC0.24□□□□□ -2.37
VSX2P58304 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.24□□□□□ -2.37
VSX2P58304 MIR6740-201ENST00000618268 113 ntBASIC0.24□□□□□ -2.37
VSX2P58304 MIR1302-1-201ENST00000637932 143 ntBASIC0.24□□□□□ -2.37
VSX2P58304 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
VSX2P58304 RNA5SP517-201ENST00000364724 117 ntBASIC0.23□□□□□ -2.37
VSX2P58304 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
VSX2P58304 Y_RNA.439-201ENST00000384119 94 ntBASIC0.23□□□□□ -2.37
VSX2P58304 RNU6-21P-201ENST00000384710 107 ntBASIC0.23□□□□□ -2.37
VSX2P58304 RNU6-308P-201ENST00000390957 107 ntBASIC0.23□□□□□ -2.37
VSX2P58304 AC236972.2-201ENST00000434979 310 ntBASIC0.23□□□□□ -2.37
VSX2P58304 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
VSX2P58304 RNU6-1046P-201ENST00000516538 107 ntBASIC0.23□□□□□ -2.37
VSX2P58304 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.23□□□□□ -2.37
VSX2P58304 MIR8055-201ENST00000610739 97 ntBASIC0.23□□□□□ -2.37
VSX2P58304 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.23□□□□□ -2.37
VSX2P58304 AL606534.2-204ENST00000635008 178 ntBASIC0.23□□□□□ -2.37
VSX2P58304 Y_RNA.384-201ENST00000383909 102 ntBASIC0.22□□□□□ -2.37
VSX2P58304 Y_RNA.418-201ENST00000384029 102 ntBASIC0.22□□□□□ -2.37
VSX2P58304 SNORA24-201ENST00000384096 131 ntBASIC0.22□□□□□ -2.37
VSX2P58304 RNU6-763P-201ENST00000390865 106 ntBASIC0.22□□□□□ -2.37
VSX2P58304 RNU6-938P-201ENST00000411285 103 ntBASIC0.22□□□□□ -2.37
VSX2P58304 RBMX2P4-201ENST00000441256 376 ntBASIC0.22□□□□□ -2.37
VSX2P58304 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.22□□□□□ -2.37
VSX2P58304 RNU7-62P-201ENST00000458856 62 ntBASIC0.22□□□□□ -2.37
VSX2P58304 RNU7-152P-201ENST00000458982 64 ntBASIC0.22□□□□□ -2.37
VSX2P58304 RNU7-67P-201ENST00000459003 62 ntBASIC0.22□□□□□ -2.37
VSX2P58304 SCARNA8-201ENST00000515924 131 ntBASIC0.22□□□□□ -2.37
VSX2P58304 RNU6-1170P-201ENST00000515974 106 ntBASIC0.22□□□□□ -2.37
VSX2P58304 AC099654.14-201ENST00000638599 341 ntBASIC0.22□□□□□ -2.37
VSX2P58304 AC010332.2-201ENST00000613083 1904 ntBASIC0.21□□□□□ -2.38
VSX2P58304 Y_RNA.85-201ENST00000363014 111 ntBASIC0.21□□□□□ -2.38
VSX2P58304 MIR548O-201ENST00000408583 114 ntBASIC0.21□□□□□ -2.38
VSX2P58304 HMGN1P33-201ENST00000432945 451 ntBASIC0.21□□□□□ -2.38
VSX2P58304 POLR2KP2-201ENST00000438155 177 ntBASIC0.21□□□□□ -2.38
VSX2P58304 snoU13.16-201ENST00000459350 104 ntBASIC0.21□□□□□ -2.38
VSX2P58304 Y_RNA.637-201ENST00000459424 114 ntBASIC0.21□□□□□ -2.38
VSX2P58304 U8.20-201ENST00000459445 131 ntBASIC0.21□□□□□ -2.38
VSX2P58304 RNU6-764P-201ENST00000516396 105 ntBASIC0.21□□□□□ -2.38
VSX2P58304 SNORA40.14-201ENST00000516543 86 ntBASIC0.21□□□□□ -2.38
VSX2P58304 RNU7-149P-201ENST00000516739 59 ntBASIC0.21□□□□□ -2.38
VSX2P58304 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
VSX2P58304 AC092634.7-201ENST00000621022 103 ntBASIC0.21□□□□□ -2.38
VSX2P58304 Y_RNA.241-201ENST00000364470 117 ntBASIC0.2□□□□□ -2.38
VSX2P58304 RNY3-201ENST00000365484 102 ntBASIC0.2□□□□□ -2.38
VSX2P58304 Y_RNA.471-201ENST00000384312 102 ntBASIC0.2□□□□□ -2.38
VSX2P58304 RNU6-102P-201ENST00000384485 104 ntBASIC0.2□□□□□ -2.38
VSX2P58304 SEPT14P8-201ENST00000508026 178 ntBASIC0.2□□□□□ -2.38
VSX2P58304 SNORA25.12-201ENST00000516202 82 ntBASIC0.2□□□□□ -2.38
VSX2P58304 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.2□□□□□ -2.38
VSX2P58304 AL049861.1-201ENST00000603130 150 ntBASIC0.2□□□□□ -2.38
VSX2P58304 AC134878.1-201ENST00000619901 243 ntBASIC0.2□□□□□ -2.38
VSX2P58304 AC090625.1-201ENST00000357130 210 ntBASIC0.19□□□□□ -2.38
VSX2P58304 Y_RNA.39-201ENST00000362620 98 ntBASIC0.19□□□□□ -2.38
VSX2P58304 Y_RNA.222-201ENST00000364264 102 ntBASIC0.19□□□□□ -2.38
VSX2P58304 Y_RNA.252-201ENST00000364556 101 ntBASIC0.19□□□□□ -2.38
VSX2P58304 RNU4-67P-201ENST00000364569 141 ntBASIC0.19□□□□□ -2.38
VSX2P58304 Y_RNA.486-201ENST00000384398 107 ntBASIC0.19□□□□□ -2.38
VSX2P58304 MIR938-201ENST00000401216 83 ntBASIC0.19□□□□□ -2.38
VSX2P58304 RNA5SP127-201ENST00000411051 133 ntBASIC0.19□□□□□ -2.38
VSX2P58304 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
VSX2P58304 SNORD19B-201ENST00000459623 84 ntBASIC0.19□□□□□ -2.38
VSX2P58304 MRPS35P2-201ENST00000508242 191 ntBASIC0.19□□□□□ -2.38
VSX2P58304 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.19□□□□□ -2.38
VSX2P58304 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.19□□□□□ -2.38
VSX2P58304 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
VSX2P58304 Y_RNA.30-201ENST00000362572 97 ntBASIC0.18□□□□□ -2.38
VSX2P58304 MIR588-201ENST00000384900 83 ntBASIC0.18□□□□□ -2.38
VSX2P58304 MIR518A1-201ENST00000385068 85 ntBASIC0.18□□□□□ -2.38
VSX2P58304 SNORD100-201ENST00000408573 76 ntBASIC0.18□□□□□ -2.38
VSX2P58304 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.18□□□□□ -2.38
VSX2P58304 RNU7-102P-201ENST00000458948 62 ntBASIC0.18□□□□□ -2.38
VSX2P58304 AC107297.1-201ENST00000459991 176 ntBASIC0.18□□□□□ -2.38
VSX2P58304 SNORA18.4-201ENST00000516440 124 ntBASIC0.18□□□□□ -2.38
VSX2P58304 RNU6-1007P-201ENST00000516586 107 ntBASIC0.18□□□□□ -2.38
VSX2P58304 AC090897.1-201ENST00000580909 226 ntBASIC0.18□□□□□ -2.38
VSX2P58304 UBE2V2P2-201ENST00000587677 504 ntBASIC0.18□□□□□ -2.38
VSX2P58304 SNORD113-5-201ENST00000607261 78 ntBASIC0.18□□□□□ -2.38
VSX2P58304 AL021707.8-201ENST00000609428 183 ntBASIC0.18□□□□□ -2.38
VSX2P58304 AC007485.1-201ENST00000616755 206 ntBASIC0.18□□□□□ -2.38
VSX2P58304 SNORD115-34-201ENST00000362441 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-12-201ENST00000362583 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 Y_RNA.58-201ENST00000362807 102 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-29-201ENST00000362834 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-9-201ENST00000362912 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-21-201ENST00000362963 81 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-14-201ENST00000363090 81 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms