Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RNU6-1138P-201ENST00000365359 106 ntBASIC1.52□□□□□ -2.17
HDAC4P56524 RNU6-484P-201ENST00000384016 107 ntBASIC1.52□□□□□ -2.17
HDAC4P56524 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
HDAC4P56524 MIR3671-201ENST00000580455 88 ntBASIC1.52□□□□□ -2.17
HDAC4P56524 AL391903.3-201ENST00000612158 163 ntBASIC1.52□□□□□ -2.17
HDAC4P56524 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HDAC4P56524 RNU6-1084P-201ENST00000362498 107 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 RNU6-268P-201ENST00000364174 107 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 RNU6-200P-201ENST00000364743 107 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 RNU6-1318P-201ENST00000365389 103 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 Y_RNA.486-201ENST00000384398 107 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 AL606845.1-201ENST00000404881 255 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 HMGN2P32-201ENST00000444648 269 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 SNRPGP8-201ENST00000454064 226 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 RN7SKP164-201ENST00000516138 266 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 AC090142.3-201ENST00000519012 385 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 RNU2-4P-201ENST00000606190 192 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 AL365434.2-201ENST00000607979 234 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 AC090425.1-201ENST00000610007 140 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 RMST_2.1-201ENST00000617263 136 ntBASIC1.51□□□□□ -2.17
HDAC4P56524 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
HDAC4P56524 Y_RNA.297-201ENST00000364950 91 ntBASIC1.5□□□□□ -2.17
HDAC4P56524 MIR653-201ENST00000385279 96 ntBASIC1.5□□□□□ -2.17
HDAC4P56524 SNX2P2-201ENST00000424553 323 ntBASIC1.5□□□□□ -2.17
HDAC4P56524 RPS27P16-201ENST00000425758 201 ntBASIC1.5□□□□□ -2.17
HDAC4P56524 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.5□□□□□ -2.17
HDAC4P56524 RNU6-1007P-201ENST00000516586 107 ntBASIC1.5□□□□□ -2.17
HDAC4P56524 AC022559.1-201ENST00000520905 205 ntBASIC1.5□□□□□ -2.17
HDAC4P56524 SNORD114-26-201ENST00000363543 72 ntBASIC1.49□□□□□ -2.17
HDAC4P56524 Y_RNA.336-201ENST00000365307 109 ntBASIC1.49□□□□□ -2.17
HDAC4P56524 Y_RNA.515-201ENST00000384535 112 ntBASIC1.49□□□□□ -2.17
HDAC4P56524 Y_RNA.571-201ENST00000384753 98 ntBASIC1.49□□□□□ -2.17
HDAC4P56524 MIR452-201ENST00000385020 85 ntBASIC1.49□□□□□ -2.17
HDAC4P56524 SNORD41-201ENST00000386967 70 ntBASIC1.49□□□□□ -2.17
HDAC4P56524 RNU6-1228P-201ENST00000391014 107 ntBASIC1.49□□□□□ -2.17
HDAC4P56524 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.49□□□□□ -2.17
HDAC4P56524 AC023449.1-201ENST00000454464 154 ntBASIC1.49□□□□□ -2.17
HDAC4P56524 RNU1-123P-201ENST00000458950 160 ntBASIC1.49□□□□□ -2.17
HDAC4P56524 AC108706.1-201ENST00000611053 297 ntBASIC1.49□□□□□ -2.17
HDAC4P56524 AC006441.5-201ENST00000612680 209 ntBASIC1.49□□□□□ -2.17
HDAC4P56524 Y_RNA.7-201ENST00000362352 102 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 SNORD45.3-201ENST00000363836 72 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 SNORD14E-201ENST00000364009 85 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 Y_RNA.435-201ENST00000384095 112 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 RNY3P5-201ENST00000384127 102 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 MIR516B2-201ENST00000385190 85 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 MIR802-201ENST00000390235 94 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 Y_RNA.622-201ENST00000411091 108 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 AC015922.2-201ENST00000435593 184 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 Y_RNA.644-201ENST00000459006 113 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.48□□□□□ -2.17
HDAC4P56524 RNU6-322P-201ENST00000516010 103 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 Y_RNA.674-201ENST00000516362 113 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 RNA5SP61-201ENST00000516453 100 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 Z83818.1-201ENST00000603584 150 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 Pinc.1-201ENST00000616452 154 ntBASIC1.48□□□□□ -2.17
HDAC4P56524 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HDAC4P56524 U8.1-201ENST00000362843 134 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 Y_RNA.91-201ENST00000363042 107 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 SNORA7.1-201ENST00000363750 139 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 Y_RNA.242-201ENST00000364473 110 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 SNORA2.2-201ENST00000365473 135 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 RNU6-442P-201ENST00000383968 104 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 Y_RNA.412-201ENST00000384001 104 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 MIR548A2-201ENST00000384956 97 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 RNU6-578P-201ENST00000390980 103 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 Y_RNA.666-201ENST00000516187 112 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 RNU6-794P-201ENST00000517261 64 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 AC007751.1-201ENST00000529260 376 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 AC109810.1-201ENST00000534066 224 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 MIR4744-201ENST00000581563 82 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
HDAC4P56524 Y_RNA.66-201ENST00000362862 102 ntBASIC1.46□□□□□ -2.18
HDAC4P56524 Y_RNA.121-201ENST00000363309 113 ntBASIC1.46□□□□□ -2.18
HDAC4P56524 RNU6-103P-201ENST00000363686 107 ntBASIC1.46□□□□□ -2.18
HDAC4P56524 RNU6-847P-201ENST00000411115 108 ntBASIC1.46□□□□□ -2.18
HDAC4P56524 RNA5SP102-201ENST00000516865 106 ntBASIC1.46□□□□□ -2.18
HDAC4P56524 AC090049.2-201ENST00000550377 109 ntBASIC1.46□□□□□ -2.18
HDAC4P56524 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.46□□□□□ -2.18
HDAC4P56524 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.46□□□□□ -2.18
HDAC4P56524 U6.106-201ENST00000636360 105 ntBASIC1.46□□□□□ -2.18
HDAC4P56524 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
HDAC4P56524 RNU6-1020P-201ENST00000363684 107 ntBASIC1.45□□□□□ -2.18
HDAC4P56524 AL451046.2-201ENST00000403074 277 ntBASIC1.45□□□□□ -2.18
HDAC4P56524 RNU2-55P-201ENST00000411146 174 ntBASIC1.45□□□□□ -2.18
HDAC4P56524 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.45□□□□□ -2.18
HDAC4P56524 AC108059.2-201ENST00000434626 151 ntBASIC1.45□□□□□ -2.18
HDAC4P56524 SNRPGP13-201ENST00000442212 177 ntBASIC1.45□□□□□ -2.18
HDAC4P56524 RPL30P7-201ENST00000479312 323 ntBASIC1.45□□□□□ -2.18
HDAC4P56524 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.45□□□□□ -2.18
HDAC4P56524 RNU6-1219P-201ENST00000516143 112 ntBASIC1.45□□□□□ -2.18
HDAC4P56524 RNU6-922P-201ENST00000516753 99 ntBASIC1.45□□□□□ -2.18
HDAC4P56524 FAM106DP-201ENST00000586416 501 ntBASIC1.45□□□□□ -2.18
HDAC4P56524 AC097639.2-201ENST00000603159 172 ntBASIC1.45□□□□□ -2.18
HDAC4P56524 AL513534.2-201ENST00000603836 250 ntBASIC1.45□□□□□ -2.18
HDAC4P56524 Y_RNA.182-201ENST00000363880 111 ntBASIC1.44□□□□□ -2.18
HDAC4P56524 Y_RNA.233-201ENST00000364407 101 ntBASIC1.44□□□□□ -2.18
HDAC4P56524 Y_RNA.634-201ENST00000364811 113 ntBASIC1.44□□□□□ -2.18
HDAC4P56524 Y_RNA.785-201ENST00000384290 109 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 241.4 ms