Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU6-1336P-201ENST00000383886 109 ntBASIC1.48□□□□□ -2.17
CDH12P55289 Y_RNA.393-201ENST00000383936 102 ntBASIC1.48□□□□□ -2.17
CDH12P55289 Y_RNA.398-201ENST00000383952 99 ntBASIC1.48□□□□□ -2.17
CDH12P55289 Y_RNA.521-201ENST00000384560 114 ntBASIC1.48□□□□□ -2.17
CDH12P55289 RNU6-997P-201ENST00000384725 107 ntBASIC1.48□□□□□ -2.17
CDH12P55289 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CDH12P55289 CYCSP49-201ENST00000420810 319 ntBASIC1.48□□□□□ -2.17
CDH12P55289 AF228730.3-201ENST00000436691 102 ntBASIC1.48□□□□□ -2.17
CDH12P55289 AC008834.1-201ENST00000511612 175 ntBASIC1.48□□□□□ -2.17
CDH12P55289 RNU6-1212P-201ENST00000517023 104 ntBASIC1.48□□□□□ -2.17
CDH12P55289 MTND5P41-201ENST00000517498 206 ntBASIC1.48□□□□□ -2.17
CDH12P55289 AC090049.2-201ENST00000550377 109 ntBASIC1.48□□□□□ -2.17
CDH12P55289 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CDH12P55289 SNORD115-28-201ENST00000363931 81 ntBASIC1.47□□□□□ -2.17
CDH12P55289 RNU6-597P-201ENST00000365620 102 ntBASIC1.47□□□□□ -2.17
CDH12P55289 Y_RNA.580-201ENST00000391004 95 ntBASIC1.47□□□□□ -2.17
CDH12P55289 AL627390.1-201ENST00000396055 340 ntBASIC1.47□□□□□ -2.17
CDH12P55289 RNU6-938P-201ENST00000411285 103 ntBASIC1.47□□□□□ -2.17
CDH12P55289 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.47□□□□□ -2.17
CDH12P55289 SNORA18.7-201ENST00000516910 131 ntBASIC1.47□□□□□ -2.17
CDH12P55289 MIR3129-201ENST00000581095 76 ntBASIC1.47□□□□□ -2.17
CDH12P55289 AL365205.2-201ENST00000594586 68 ntBASIC1.47□□□□□ -2.17
CDH12P55289 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
CDH12P55289 Y_RNA.37-201ENST00000362606 108 ntBASIC1.46□□□□□ -2.18
CDH12P55289 SNORD116-18-201ENST00000383961 92 ntBASIC1.46□□□□□ -2.18
CDH12P55289 SNORD41-201ENST00000386967 70 ntBASIC1.46□□□□□ -2.18
CDH12P55289 SNORD77.3-201ENST00000391113 65 ntBASIC1.46□□□□□ -2.18
CDH12P55289 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.46□□□□□ -2.18
CDH12P55289 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.46□□□□□ -2.18
CDH12P55289 RNU6-922P-201ENST00000516753 99 ntBASIC1.46□□□□□ -2.18
CDH12P55289 RNU6-295P-201ENST00000516901 104 ntBASIC1.46□□□□□ -2.18
CDH12P55289 RNU7-181P-201ENST00000517234 74 ntBASIC1.46□□□□□ -2.18
CDH12P55289 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
CDH12P55289 MIR502-201ENST00000606349 86 ntBASIC1.46□□□□□ -2.18
CDH12P55289 MIR376A2-201ENST00000636782 80 ntBASIC1.46□□□□□ -2.18
CDH12P55289 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CDH12P55289 Y_RNA.170-201ENST00000363746 110 ntBASIC1.45□□□□□ -2.18
CDH12P55289 RNU6-1082P-201ENST00000364574 107 ntBASIC1.45□□□□□ -2.18
CDH12P55289 RNU6-449P-201ENST00000383914 107 ntBASIC1.45□□□□□ -2.18
CDH12P55289 MIR504-201ENST00000385065 83 ntBASIC1.45□□□□□ -2.18
CDH12P55289 SNORD28B-201ENST00000390993 75 ntBASIC1.45□□□□□ -2.18
CDH12P55289 U8.17-201ENST00000391292 132 ntBASIC1.45□□□□□ -2.18
CDH12P55289 AC027119.1-201ENST00000440877 241 ntBASIC1.45□□□□□ -2.18
CDH12P55289 SNORD123-201ENST00000459473 70 ntBASIC1.45□□□□□ -2.18
CDH12P55289 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
CDH12P55289 AC079140.2-201ENST00000506193 142 ntBASIC1.45□□□□□ -2.18
CDH12P55289 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.45□□□□□ -2.18
CDH12P55289 SNORD36C-201ENST00000516733 66 ntBASIC1.45□□□□□ -2.18
CDH12P55289 SNORA74.3-201ENST00000517108 154 ntBASIC1.45□□□□□ -2.18
CDH12P55289 MIR4255-201ENST00000579351 72 ntBASIC1.45□□□□□ -2.18
CDH12P55289 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH12P55289 DNAJC19P2-201ENST00000593340 302 ntBASIC1.45□□□□□ -2.18
CDH12P55289 AL513534.2-201ENST00000603836 250 ntBASIC1.45□□□□□ -2.18
CDH12P55289 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CDH12P55289 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.44□□□□□ -2.18
CDH12P55289 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CDH12P55289 RNY1P11-201ENST00000363759 113 ntBASIC1.44□□□□□ -2.18
CDH12P55289 RNU6-1062P-201ENST00000383908 107 ntBASIC1.44□□□□□ -2.18
CDH12P55289 Y_RNA.494-201ENST00000384432 111 ntBASIC1.44□□□□□ -2.18
CDH12P55289 Y_RNA.542-201ENST00000384641 111 ntBASIC1.44□□□□□ -2.18
CDH12P55289 SNORA25.15-201ENST00000516487 89 ntBASIC1.44□□□□□ -2.18
CDH12P55289 MIR548AR-201ENST00000582191 57 ntBASIC1.44□□□□□ -2.18
CDH12P55289 AC134878.1-201ENST00000619901 243 ntBASIC1.44□□□□□ -2.18
CDH12P55289 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
CDH12P55289 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CDH12P55289 RNU6-151P-201ENST00000364158 107 ntBASIC1.43□□□□□ -2.18
CDH12P55289 SNORA25.7-201ENST00000364375 127 ntBASIC1.43□□□□□ -2.18
CDH12P55289 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
CDH12P55289 AL451046.2-201ENST00000403074 277 ntBASIC1.43□□□□□ -2.18
CDH12P55289 RNU6-588P-201ENST00000410281 105 ntBASIC1.43□□□□□ -2.18
CDH12P55289 RNU6-322P-201ENST00000516010 103 ntBASIC1.43□□□□□ -2.18
CDH12P55289 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.43□□□□□ -2.18
CDH12P55289 Y_RNA.778-201ENST00000620203 90 ntBASIC1.43□□□□□ -2.18
CDH12P55289 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.43□□□□□ -2.18
CDH12P55289 MIR6844-201ENST00000637122 62 ntBASIC1.43□□□□□ -2.18
CDH12P55289 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDH12P55289 AP000648.3-201ENST00000623539 4507 ntBASIC1.42□□□□□ -2.18
CDH12P55289 RNU6-1292P-201ENST00000383856 107 ntBASIC1.42□□□□□ -2.18
CDH12P55289 RNU1-78P-201ENST00000391248 165 ntBASIC1.42□□□□□ -2.18
CDH12P55289 MIR934-201ENST00000401241 83 ntBASIC1.42□□□□□ -2.18
CDH12P55289 SNX2P2-201ENST00000424553 323 ntBASIC1.42□□□□□ -2.18
CDH12P55289 AC087499.4-201ENST00000448505 178 ntBASIC1.42□□□□□ -2.18
CDH12P55289 RNU7-200P-201ENST00000516105 62 ntBASIC1.42□□□□□ -2.18
CDH12P55289 AP003484.1-201ENST00000530974 250 ntBASIC1.42□□□□□ -2.18
CDH12P55289 MIR3646-201ENST00000578301 84 ntBASIC1.42□□□□□ -2.18
CDH12P55289 MIR4285-201ENST00000581001 85 ntBASIC1.42□□□□□ -2.18
CDH12P55289 MIR3945-201ENST00000581853 98 ntBASIC1.42□□□□□ -2.18
CDH12P55289 BX248123.2-201ENST00000606318 124 ntBASIC1.42□□□□□ -2.18
CDH12P55289 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CDH12P55289 RNU4-11P-201ENST00000365287 132 ntBASIC1.41□□□□□ -2.18
CDH12P55289 RNU6-1189P-201ENST00000383958 107 ntBASIC1.41□□□□□ -2.18
CDH12P55289 Y_RNA.410-201ENST00000383992 113 ntBASIC1.41□□□□□ -2.18
CDH12P55289 Y_RNA.506-201ENST00000384494 102 ntBASIC1.41□□□□□ -2.18
CDH12P55289 MIR624-201ENST00000385217 97 ntBASIC1.41□□□□□ -2.18
CDH12P55289 SNORA75.5-201ENST00000391291 81 ntBASIC1.41□□□□□ -2.18
CDH12P55289 SNORA26.9-201ENST00000391322 122 ntBASIC1.41□□□□□ -2.18
CDH12P55289 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
CDH12P55289 RNA5SP127-201ENST00000411051 133 ntBASIC1.41□□□□□ -2.18
CDH12P55289 RPS27P16-201ENST00000425758 201 ntBASIC1.41□□□□□ -2.18
CDH12P55289 snoU13.15-201ENST00000459407 104 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms