Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 Y_RNA.439-201ENST00000384119 94 ntBASIC0.14□□□□□ -2.39
CDH6P55285 RNU6-364P-201ENST00000384387 107 ntBASIC0.14□□□□□ -2.39
CDH6P55285 Y_RNA.496-201ENST00000384444 101 ntBASIC0.14□□□□□ -2.39
CDH6P55285 MIR518F-201ENST00000384973 87 ntBASIC0.14□□□□□ -2.39
CDH6P55285 RNU6-308P-201ENST00000390957 107 ntBASIC0.14□□□□□ -2.39
CDH6P55285 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
CDH6P55285 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.14□□□□□ -2.39
CDH6P55285 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.14□□□□□ -2.39
CDH6P55285 Y_RNA.661-201ENST00000516003 99 ntBASIC0.14□□□□□ -2.39
CDH6P55285 RNA5SP94-201ENST00000516917 108 ntBASIC0.14□□□□□ -2.39
CDH6P55285 Y_RNA.718-201ENST00000517110 102 ntBASIC0.14□□□□□ -2.39
CDH6P55285 MIR1273G-201ENST00000577677 100 ntBASIC0.14□□□□□ -2.39
CDH6P55285 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.14□□□□□ -2.39
CDH6P55285 MIR7111-201ENST00000619751 72 ntBASIC0.14□□□□□ -2.39
CDH6P55285 Y_RNA.39-201ENST00000362620 98 ntBASIC0.13□□□□□ -2.39
CDH6P55285 Y_RNA.286-201ENST00000364813 102 ntBASIC0.13□□□□□ -2.39
CDH6P55285 SNORD63-201ENST00000384262 68 ntBASIC0.13□□□□□ -2.39
CDH6P55285 MIR1257-201ENST00000408490 117 ntBASIC0.13□□□□□ -2.39
CDH6P55285 AL160004.2-201ENST00000432935 350 ntBASIC0.13□□□□□ -2.39
CDH6P55285 AC098614.3-201ENST00000438957 440 ntBASIC0.13□□□□□ -2.39
CDH6P55285 AC023449.1-201ENST00000454464 154 ntBASIC0.13□□□□□ -2.39
CDH6P55285 RNU7-102P-201ENST00000458948 62 ntBASIC0.13□□□□□ -2.39
CDH6P55285 RNU6-277P-201ENST00000516272 106 ntBASIC0.13□□□□□ -2.39
CDH6P55285 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.13□□□□□ -2.39
CDH6P55285 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
CDH6P55285 AC090897.1-201ENST00000580909 226 ntBASIC0.13□□□□□ -2.39
CDH6P55285 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.13□□□□□ -2.39
CDH6P55285 AC084781.2-201ENST00000615568 161 ntBASIC0.13□□□□□ -2.39
CDH6P55285 MIR1302-1-201ENST00000637932 143 ntBASIC0.13□□□□□ -2.39
CDH6P55285 SNORD115-34-201ENST00000362441 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-12-201ENST00000362583 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-29-201ENST00000362834 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-9-201ENST00000362912 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-21-201ENST00000362963 81 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-14-201ENST00000363090 81 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-13-201ENST00000363358 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD114-26-201ENST00000363543 72 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-41-201ENST00000363608 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-11-201ENST00000363616 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-5-201ENST00000363633 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-39-201ENST00000363694 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-4-201ENST00000363810 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-16-201ENST00000363887 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-6-201ENST00000363942 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-42-201ENST00000364273 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-15-201ENST00000364809 81 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-1-201ENST00000364961 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-26-201ENST00000365067 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-10-201ENST00000365073 81 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-43-201ENST00000365503 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-36-201ENST00000365629 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD38B-201ENST00000384690 67 ntBASIC0.12□□□□□ -2.39
CDH6P55285 RNU6-913P-201ENST00000390913 95 ntBASIC0.12□□□□□ -2.39
CDH6P55285 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD100-201ENST00000408573 76 ntBASIC0.12□□□□□ -2.39
CDH6P55285 HMGN1P33-201ENST00000432945 451 ntBASIC0.12□□□□□ -2.39
CDH6P55285 RNU6-1170P-201ENST00000515974 106 ntBASIC0.12□□□□□ -2.39
CDH6P55285 Y_RNA.666-201ENST00000516187 112 ntBASIC0.12□□□□□ -2.39
CDH6P55285 RNU4-77P-201ENST00000516692 156 ntBASIC0.12□□□□□ -2.39
CDH6P55285 RNU7-149P-201ENST00000516739 59 ntBASIC0.12□□□□□ -2.39
CDH6P55285 RNA5SP480-201ENST00000516840 109 ntBASIC0.12□□□□□ -2.39
CDH6P55285 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.12□□□□□ -2.39
CDH6P55285 AP000942.4-201ENST00000604811 241 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD115-40-201ENST00000606510 82 ntBASIC0.12□□□□□ -2.39
CDH6P55285 AC022140.2-201ENST00000623500 188 ntBASIC0.12□□□□□ -2.39
CDH6P55285 SNORD38B-202ENST00000625943 69 ntBASIC0.12□□□□□ -2.39
CDH6P55285 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
CDH6P55285 RNU6-1115P-201ENST00000362490 106 ntBASIC0.11□□□□□ -2.39
CDH6P55285 Y_RNA.384-201ENST00000383909 102 ntBASIC0.11□□□□□ -2.39
CDH6P55285 MIR588-201ENST00000384900 83 ntBASIC0.11□□□□□ -2.39
CDH6P55285 MIR125B2-201ENST00000385128 89 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-1319P-201ENST00000390855 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-747P-201ENST00000390928 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-1248P-201ENST00000391096 64 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-241P-201ENST00000391148 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-1165P-201ENST00000410119 107 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-447P-201ENST00000410293 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-1118P-201ENST00000410382 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-1076P-201ENST00000410397 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-355P-201ENST00000410427 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-791P-201ENST00000410467 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-705P-201ENST00000410601 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-1100P-201ENST00000410691 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-860P-201ENST00000410860 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-383P-201ENST00000410864 94 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-1217P-201ENST00000411276 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU6-785P-201ENST00000411324 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 MIR18B-201ENST00000454574 71 ntBASIC0.11□□□□□ -2.39
CDH6P55285 RNU7-185P-201ENST00000459215 60 ntBASIC0.11□□□□□ -2.39
CDH6P55285 U8.20-201ENST00000459445 131 ntBASIC0.11□□□□□ -2.39
CDH6P55285 AL049861.1-201ENST00000603130 150 ntBASIC0.11□□□□□ -2.39
CDH6P55285 U6.90-201ENST00000614007 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 AL138825.1-201ENST00000618587 192 ntBASIC0.11□□□□□ -2.39
CDH6P55285 U6.70-201ENST00000620287 104 ntBASIC0.11□□□□□ -2.39
CDH6P55285 uc_338.16-201ENST00000621804 95 ntBASIC0.11□□□□□ -2.39
CDH6P55285 Y_RNA.80-201ENST00000362996 102 ntBASIC0.1□□□□□ -2.39
CDH6P55285 RNU6-1205P-201ENST00000363625 106 ntBASIC0.1□□□□□ -2.39
CDH6P55285 RNU6-899P-201ENST00000363947 107 ntBASIC0.1□□□□□ -2.39
CDH6P55285 Y_RNA.471-201ENST00000384312 102 ntBASIC0.1□□□□□ -2.39
CDH6P55285 SNORA8.2-201ENST00000384372 139 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms