Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU2-64P-201ENST00000411315 191 ntBASIC0.85□□□□□ -2.27
VCPP55072 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.85□□□□□ -2.27
VCPP55072 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.85□□□□□ -2.27
VCPP55072 SNORD11-201ENST00000459124 84 ntBASIC0.85□□□□□ -2.27
VCPP55072 RNU7-90P-201ENST00000459216 62 ntBASIC0.85□□□□□ -2.27
VCPP55072 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
VCPP55072 RNU2-31P-201ENST00000516954 155 ntBASIC0.85□□□□□ -2.27
VCPP55072 AP003716.2-201ENST00000528260 108 ntBASIC0.85□□□□□ -2.27
VCPP55072 MIR4680-201ENST00000580906 66 ntBASIC0.85□□□□□ -2.27
VCPP55072 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
VCPP55072 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.85□□□□□ -2.27
VCPP55072 MIR103A2-201ENST00000362154 78 ntBASIC0.84□□□□□ -2.27
VCPP55072 SNORA25.3-201ENST00000363205 127 ntBASIC0.84□□□□□ -2.27
VCPP55072 RNU6-1205P-201ENST00000363625 106 ntBASIC0.84□□□□□ -2.27
VCPP55072 Y_RNA.202-201ENST00000364083 110 ntBASIC0.84□□□□□ -2.27
VCPP55072 Y_RNA.210-201ENST00000364161 110 ntBASIC0.84□□□□□ -2.27
VCPP55072 RNU6-268P-201ENST00000364174 107 ntBASIC0.84□□□□□ -2.27
VCPP55072 Y_RNA.541-201ENST00000384640 113 ntBASIC0.84□□□□□ -2.27
VCPP55072 MIR508-201ENST00000384857 115 ntBASIC0.84□□□□□ -2.27
VCPP55072 MIR215-201ENST00000384858 110 ntBASIC0.84□□□□□ -2.27
VCPP55072 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
VCPP55072 SNORD72-201ENST00000390994 80 ntBASIC0.84□□□□□ -2.27
VCPP55072 Y_RNA.637-201ENST00000459424 114 ntBASIC0.84□□□□□ -2.27
VCPP55072 RNU6-830P-201ENST00000516353 107 ntBASIC0.84□□□□□ -2.27
VCPP55072 MIR548AR-201ENST00000582191 57 ntBASIC0.84□□□□□ -2.27
VCPP55072 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.84□□□□□ -2.27
VCPP55072 Pinc.1-201ENST00000616452 154 ntBASIC0.84□□□□□ -2.27
VCPP55072 MIR2909-201ENST00000617113 69 ntBASIC0.84□□□□□ -2.27
VCPP55072 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.84□□□□□ -2.27
VCPP55072 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
VCPP55072 Y_RNA.152-201ENST00000363578 100 ntBASIC0.83□□□□□ -2.28
VCPP55072 RNA5SP48-201ENST00000363969 126 ntBASIC0.83□□□□□ -2.28
VCPP55072 RNU6-806P-201ENST00000365147 105 ntBASIC0.83□□□□□ -2.28
VCPP55072 RNU6-326P-201ENST00000365480 107 ntBASIC0.83□□□□□ -2.28
VCPP55072 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
VCPP55072 SNORA53-201ENST00000391141 249 ntBASIC0.83□□□□□ -2.28
VCPP55072 AL603910.2-201ENST00000407268 136 ntBASIC0.83□□□□□ -2.28
VCPP55072 RPL21P38-201ENST00000418090 167 ntBASIC0.83□□□□□ -2.28
VCPP55072 MTND4LP30-201ENST00000454092 297 ntBASIC0.83□□□□□ -2.28
VCPP55072 RNU6-1143P-201ENST00000516125 104 ntBASIC0.83□□□□□ -2.28
VCPP55072 RNU6-197P-201ENST00000516680 100 ntBASIC0.83□□□□□ -2.28
VCPP55072 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.83□□□□□ -2.28
VCPP55072 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.83□□□□□ -2.28
VCPP55072 AC037487.3-201ENST00000606668 112 ntBASIC0.83□□□□□ -2.28
VCPP55072 AC013791.1-201ENST00000616619 62 ntBASIC0.83□□□□□ -2.28
VCPP55072 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
VCPP55072 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VCPP55072 SNORA25.1-201ENST00000362326 128 ntBASIC0.82□□□□□ -2.28
VCPP55072 Y_RNA.242-201ENST00000364473 110 ntBASIC0.82□□□□□ -2.28
VCPP55072 Y_RNA.330-201ENST00000365230 109 ntBASIC0.82□□□□□ -2.28
VCPP55072 MIR100-201ENST00000385259 80 ntBASIC0.82□□□□□ -2.28
VCPP55072 SNORD28B-201ENST00000390993 75 ntBASIC0.82□□□□□ -2.28
VCPP55072 MIR1185-1-201ENST00000408598 86 ntBASIC0.82□□□□□ -2.28
VCPP55072 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
VCPP55072 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.82□□□□□ -2.28
VCPP55072 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.82□□□□□ -2.28
VCPP55072 RN7SKP164-201ENST00000516138 266 ntBASIC0.82□□□□□ -2.28
VCPP55072 Y_RNA.701-201ENST00000516812 110 ntBASIC0.82□□□□□ -2.28
VCPP55072 AL356055.1-201ENST00000602528 446 ntBASIC0.82□□□□□ -2.28
VCPP55072 AC006441.5-201ENST00000612680 209 ntBASIC0.82□□□□□ -2.28
VCPP55072 SEPT14P17-201ENST00000617978 177 ntBASIC0.82□□□□□ -2.28
VCPP55072 Y_RNA.26-201ENST00000362539 101 ntBASIC0.81□□□□□ -2.28
VCPP55072 RNU6-1272P-201ENST00000362776 107 ntBASIC0.81□□□□□ -2.28
VCPP55072 Y_RNA.64-201ENST00000362845 102 ntBASIC0.81□□□□□ -2.28
VCPP55072 RNU6-514P-201ENST00000384208 107 ntBASIC0.81□□□□□ -2.28
VCPP55072 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
VCPP55072 U8.17-201ENST00000391292 132 ntBASIC0.81□□□□□ -2.28
VCPP55072 AC091959.1-201ENST00000495857 238 ntBASIC0.81□□□□□ -2.28
VCPP55072 RNU6-1137P-201ENST00000517073 99 ntBASIC0.81□□□□□ -2.28
VCPP55072 AP003733.2-201ENST00000529409 171 ntBASIC0.81□□□□□ -2.28
VCPP55072 MIR5692C2-201ENST00000577959 77 ntBASIC0.81□□□□□ -2.28
VCPP55072 MIR4251-201ENST00000635819 61 ntBASIC0.81□□□□□ -2.28
VCPP55072 Y_RNA.153-201ENST00000363615 91 ntBASIC0.8□□□□□ -2.28
VCPP55072 Y_RNA.412-201ENST00000384001 104 ntBASIC0.8□□□□□ -2.28
VCPP55072 MIR942-201ENST00000401111 86 ntBASIC0.8□□□□□ -2.28
VCPP55072 RNU6-383P-201ENST00000410864 94 ntBASIC0.8□□□□□ -2.28
VCPP55072 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
VCPP55072 MTCYBP6-201ENST00000441810 138 ntBASIC0.8□□□□□ -2.28
VCPP55072 AC023449.1-201ENST00000454464 154 ntBASIC0.8□□□□□ -2.28
VCPP55072 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.8□□□□□ -2.28
VCPP55072 SNORA27.4-201ENST00000516650 95 ntBASIC0.8□□□□□ -2.28
VCPP55072 AC015726.2-201ENST00000620112 122 ntBASIC0.8□□□□□ -2.28
VCPP55072 AC022140.2-201ENST00000623500 188 ntBASIC0.8□□□□□ -2.28
VCPP55072 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
VCPP55072 Y_RNA.14-201ENST00000362415 103 ntBASIC0.79□□□□□ -2.28
VCPP55072 SNORA33.2-201ENST00000365413 134 ntBASIC0.79□□□□□ -2.28
VCPP55072 VTRNA1-3-201ENST00000365645 89 ntBASIC0.79□□□□□ -2.28
VCPP55072 RNU6-662P-201ENST00000384253 104 ntBASIC0.79□□□□□ -2.28
VCPP55072 RNU6-1067P-201ENST00000384752 107 ntBASIC0.79□□□□□ -2.28
VCPP55072 RNA5SP496-201ENST00000391240 109 ntBASIC0.79□□□□□ -2.28
VCPP55072 RNU6-985P-201ENST00000410182 104 ntBASIC0.79□□□□□ -2.28
VCPP55072 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.79□□□□□ -2.28
VCPP55072 RPS3AP1-201ENST00000413190 320 ntBASIC0.79□□□□□ -2.28
VCPP55072 BTF3P11-201ENST00000426582 477 ntBASIC0.79□□□□□ -2.28
VCPP55072 RNA5SP285-201ENST00000516619 119 ntBASIC0.79□□□□□ -2.28
VCPP55072 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.79□□□□□ -2.28
VCPP55072 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.79□□□□□ -2.28
VCPP55072 AC106800.4-201ENST00000614905 153 ntBASIC0.79□□□□□ -2.28
VCPP55072 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
VCPP55072 Y_RNA.16-201ENST00000362421 102 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms