Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 Y_RNA.118-201ENST00000363300 101 ntBASIC0.7□□□□□ -2.3
LHX2P50458 RNU6-211P-201ENST00000384047 107 ntBASIC0.7□□□□□ -2.3
LHX2P50458 RNU6-1289P-201ENST00000384431 106 ntBASIC0.7□□□□□ -2.3
LHX2P50458 RNU6-1160P-201ENST00000384546 104 ntBASIC0.7□□□□□ -2.3
LHX2P50458 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
LHX2P50458 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.7□□□□□ -2.3
LHX2P50458 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.7□□□□□ -2.3
LHX2P50458 TRBVB-201ENST00000477100 408 ntBASIC0.7□□□□□ -2.3
LHX2P50458 RNU4-57P-201ENST00000515980 135 ntBASIC0.7□□□□□ -2.3
LHX2P50458 RNU7-149P-201ENST00000516739 59 ntBASIC0.7□□□□□ -2.3
LHX2P50458 Y_RNA.720-201ENST00000517166 92 ntBASIC0.7□□□□□ -2.3
LHX2P50458 AL442663.2-201ENST00000554385 511 ntBASIC0.7□□□□□ -2.3
LHX2P50458 AC006504.6-201ENST00000590142 199 ntBASIC0.7□□□□□ -2.3
LHX2P50458 AL049861.1-201ENST00000603130 150 ntBASIC0.7□□□□□ -2.3
LHX2P50458 AP001282.2-201ENST00000616149 309 ntBASIC0.7□□□□□ -2.3
LHX2P50458 RMST_2.1-201ENST00000617263 136 ntBASIC0.7□□□□□ -2.3
LHX2P50458 MIR367-201ENST00000362299 68 ntBASIC0.69□□□□□ -2.3
LHX2P50458 Y_RNA.275-201ENST00000364726 110 ntBASIC0.69□□□□□ -2.3
LHX2P50458 RNU1-36P-201ENST00000365130 165 ntBASIC0.69□□□□□ -2.3
LHX2P50458 RNU6-1138P-201ENST00000365359 106 ntBASIC0.69□□□□□ -2.3
LHX2P50458 RNU6-1067P-201ENST00000384752 107 ntBASIC0.69□□□□□ -2.3
LHX2P50458 MIR606-201ENST00000384851 96 ntBASIC0.69□□□□□ -2.3
LHX2P50458 MIR146A-201ENST00000385201 99 ntBASIC0.69□□□□□ -2.3
LHX2P50458 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
LHX2P50458 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.69□□□□□ -2.3
LHX2P50458 AL392103.1-201ENST00000447000 198 ntBASIC0.69□□□□□ -2.3
LHX2P50458 SNORD124-201ENST00000459577 104 ntBASIC0.69□□□□□ -2.3
LHX2P50458 MTATP8P1-201ENST00000467115 207 ntBASIC0.69□□□□□ -2.3
LHX2P50458 RNU6-635P-201ENST00000516651 102 ntBASIC0.69□□□□□ -2.3
LHX2P50458 RNU11-2P-201ENST00000516898 142 ntBASIC0.69□□□□□ -2.3
LHX2P50458 RNU6-1223P-201ENST00000517124 104 ntBASIC0.69□□□□□ -2.3
LHX2P50458 RNU7-181P-201ENST00000517234 74 ntBASIC0.69□□□□□ -2.3
LHX2P50458 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.69□□□□□ -2.3
LHX2P50458 AC013244.2-201ENST00000603396 103 ntBASIC0.69□□□□□ -2.3
LHX2P50458 Y_RNA.812-201ENST00000610788 101 ntBASIC0.69□□□□□ -2.3
LHX2P50458 Y_RNA.784-201ENST00000613803 101 ntBASIC0.69□□□□□ -2.3
LHX2P50458 Y_RNA.802-201ENST00000614892 130 ntBASIC0.69□□□□□ -2.3
LHX2P50458 Y_RNA.787-201ENST00000616522 101 ntBASIC0.69□□□□□ -2.3
LHX2P50458 Y_RNA.780-201ENST00000617336 101 ntBASIC0.69□□□□□ -2.3
LHX2P50458 SEPT14P17-201ENST00000617978 177 ntBASIC0.69□□□□□ -2.3
LHX2P50458 Y_RNA.801-201ENST00000619005 101 ntBASIC0.69□□□□□ -2.3
LHX2P50458 AC008133.2-201ENST00000624540 351 ntBASIC0.69□□□□□ -2.3
LHX2P50458 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.69□□□□□ -2.3
LHX2P50458 MIR103A2-201ENST00000362154 78 ntBASIC0.68□□□□□ -2.3
LHX2P50458 MIR335-201ENST00000362173 94 ntBASIC0.68□□□□□ -2.3
LHX2P50458 Y_RNA.117-201ENST00000363294 101 ntBASIC0.68□□□□□ -2.3
LHX2P50458 RNU6-238P-201ENST00000363313 106 ntBASIC0.68□□□□□ -2.3
LHX2P50458 RNA5SP48-201ENST00000363969 126 ntBASIC0.68□□□□□ -2.3
LHX2P50458 RNU4-10P-201ENST00000364383 140 ntBASIC0.68□□□□□ -2.3
LHX2P50458 Y_RNA.237-201ENST00000364439 102 ntBASIC0.68□□□□□ -2.3
LHX2P50458 SNORA63C-201ENST00000364578 129 ntBASIC0.68□□□□□ -2.3
LHX2P50458 SNORD114-24-201ENST00000365029 72 ntBASIC0.68□□□□□ -2.3
LHX2P50458 Y_RNA.370-201ENST00000365589 108 ntBASIC0.68□□□□□ -2.3
LHX2P50458 Y_RNA.512-201ENST00000384518 102 ntBASIC0.68□□□□□ -2.3
LHX2P50458 Y_RNA.537-201ENST00000384626 109 ntBASIC0.68□□□□□ -2.3
LHX2P50458 MIR200A-201ENST00000384875 90 ntBASIC0.68□□□□□ -2.3
LHX2P50458 MIR626-201ENST00000385032 94 ntBASIC0.68□□□□□ -2.3
LHX2P50458 MIR1302-7-201ENST00000408841 72 ntBASIC0.68□□□□□ -2.3
LHX2P50458 RNU2-13P-201ENST00000515909 113 ntBASIC0.68□□□□□ -2.3
LHX2P50458 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
LHX2P50458 MIR8062-201ENST00000621515 85 ntBASIC0.68□□□□□ -2.3
LHX2P50458 MIR4251-201ENST00000635819 61 ntBASIC0.68□□□□□ -2.3
LHX2P50458 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.67□□□□□ -2.3
LHX2P50458 Y_RNA.24-201ENST00000362508 103 ntBASIC0.67□□□□□ -2.3
LHX2P50458 Y_RNA.44-201ENST00000362676 108 ntBASIC0.67□□□□□ -2.3
LHX2P50458 SNORA63-201ENST00000363450 132 ntBASIC0.67□□□□□ -2.3
LHX2P50458 RNU6-740P-201ENST00000364734 105 ntBASIC0.67□□□□□ -2.3
LHX2P50458 SNORA1.2-201ENST00000365189 134 ntBASIC0.67□□□□□ -2.3
LHX2P50458 Y_RNA.330-201ENST00000365230 109 ntBASIC0.67□□□□□ -2.3
LHX2P50458 Y_RNA.547-201ENST00000384654 119 ntBASIC0.67□□□□□ -2.3
LHX2P50458 SNORA8.3-201ENST00000384679 139 ntBASIC0.67□□□□□ -2.3
LHX2P50458 Y_RNA.572-201ENST00000384757 98 ntBASIC0.67□□□□□ -2.3
LHX2P50458 RNU6-713P-201ENST00000384761 107 ntBASIC0.67□□□□□ -2.3
LHX2P50458 MIR570-201ENST00000384917 97 ntBASIC0.67□□□□□ -2.3
LHX2P50458 MT-TW-201ENST00000387382 68 ntBASIC0.67□□□□□ -2.3
LHX2P50458 Y_RNA.587-201ENST00000391210 103 ntBASIC0.67□□□□□ -2.3
LHX2P50458 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.67□□□□□ -2.3
LHX2P50458 SNORD77.4-201ENST00000516158 81 ntBASIC0.67□□□□□ -2.3
LHX2P50458 Y_RNA.666-201ENST00000516187 112 ntBASIC0.67□□□□□ -2.3
LHX2P50458 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
LHX2P50458 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.67□□□□□ -2.3
LHX2P50458 AC015726.2-201ENST00000620112 122 ntBASIC0.67□□□□□ -2.3
LHX2P50458 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
LHX2P50458 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
LHX2P50458 Y_RNA.145-201ENST00000363527 102 ntBASIC0.66□□□□□ -2.3
LHX2P50458 Y_RNA.486-201ENST00000384398 107 ntBASIC0.66□□□□□ -2.3
LHX2P50458 RNU6-1011P-201ENST00000384668 107 ntBASIC0.66□□□□□ -2.3
LHX2P50458 MIR100-201ENST00000385259 80 ntBASIC0.66□□□□□ -2.3
LHX2P50458 MIR1302-6-201ENST00000408466 90 ntBASIC0.66□□□□□ -2.3
LHX2P50458 MIR548F4-201ENST00000408515 105 ntBASIC0.66□□□□□ -2.3
LHX2P50458 RNU6-651P-201ENST00000411040 105 ntBASIC0.66□□□□□ -2.3
LHX2P50458 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
LHX2P50458 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
LHX2P50458 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.66□□□□□ -2.3
LHX2P50458 RNU7-25P-201ENST00000516544 62 ntBASIC0.66□□□□□ -2.3
LHX2P50458 MIR4662B-201ENST00000579498 81 ntBASIC0.66□□□□□ -2.3
LHX2P50458 AC008737.2-201ENST00000599446 118 ntBASIC0.66□□□□□ -2.3
LHX2P50458 AC006006.1-201ENST00000603082 144 ntBASIC0.66□□□□□ -2.3
LHX2P50458 MIR4791-201ENST00000607666 84 ntBASIC0.66□□□□□ -2.3
LHX2P50458 AC022709.1-201ENST00000615967 87 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms