Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 7SK.13-201ENST00000622040 250 ntBASIC1.31□□□□□ -2.2
MTHFRP42898 snoU2_19.4-201ENST00000364329 80 ntBASIC1.3□□□□□ -2.2
MTHFRP42898 RNU6-144P-201ENST00000383951 107 ntBASIC1.3□□□□□ -2.2
MTHFRP42898 Y_RNA.552-201ENST00000384665 112 ntBASIC1.3□□□□□ -2.2
MTHFRP42898 MIR626-201ENST00000385032 94 ntBASIC1.3□□□□□ -2.2
MTHFRP42898 MIR526A2-201ENST00000390198 65 ntBASIC1.3□□□□□ -2.2
MTHFRP42898 RNU6-383P-201ENST00000410864 94 ntBASIC1.3□□□□□ -2.2
MTHFRP42898 RNU6-138P-201ENST00000515952 107 ntBASIC1.3□□□□□ -2.2
MTHFRP42898 RNU6-794P-201ENST00000517261 64 ntBASIC1.3□□□□□ -2.2
MTHFRP42898 MIR151B-201ENST00000584249 96 ntBASIC1.3□□□□□ -2.2
MTHFRP42898 AC090425.1-201ENST00000610007 140 ntBASIC1.3□□□□□ -2.2
MTHFRP42898 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
MTHFRP42898 MIR411-201ENST00000362239 96 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 SNORD114-27-201ENST00000363766 70 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 Y_RNA.200-201ENST00000364018 102 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 U8.5-201ENST00000364528 136 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 SNORA70.7-201ENST00000384159 133 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 MIR522-201ENST00000385071 87 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 MIR653-201ENST00000385279 96 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 SNORD41-201ENST00000386967 70 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 AC108059.2-201ENST00000434626 151 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 SNORD11-201ENST00000459124 84 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 RNU6-165P-201ENST00000517170 99 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.29□□□□□ -2.2
MTHFRP42898 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
MTHFRP42898 AC090049.2-201ENST00000550377 109 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 MIR4308-201ENST00000580634 81 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 MIR4762-201ENST00000585261 75 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 MIR6788-201ENST00000618842 66 ntBASIC1.29□□□□□ -2.2
MTHFRP42898 RNU6-833P-201ENST00000363486 107 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 RNU6-1209P-201ENST00000363655 107 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 Y_RNA.199-201ENST00000364014 102 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 RNU6-200P-201ENST00000364743 107 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 Y_RNA.293-201ENST00000364908 93 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 SNORA2.2-201ENST00000365473 135 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 MIR526A1-201ENST00000384897 85 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 RNU6-381P-201ENST00000391259 108 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 AL451046.2-201ENST00000403074 277 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 RNU6-847P-201ENST00000411115 108 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 NDUFA4P2-201ENST00000489989 244 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 SCARNA8-201ENST00000515924 131 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 RNU6-322P-201ENST00000516010 103 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 Y_RNA.802-201ENST00000614892 130 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 AC027279.3-201ENST00000625055 122 ntBASIC1.28□□□□□ -2.2
MTHFRP42898 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
MTHFRP42898 Y_RNA.24-201ENST00000362508 103 ntBASIC1.27□□□□□ -2.21
MTHFRP42898 Y_RNA.229-201ENST00000364347 113 ntBASIC1.27□□□□□ -2.21
MTHFRP42898 Y_RNA.262-201ENST00000364641 102 ntBASIC1.27□□□□□ -2.21
MTHFRP42898 RNU6-47P-201ENST00000383866 107 ntBASIC1.27□□□□□ -2.21
MTHFRP42898 Y_RNA.515-201ENST00000384535 112 ntBASIC1.27□□□□□ -2.21
MTHFRP42898 RNU6-918P-201ENST00000391219 106 ntBASIC1.27□□□□□ -2.21
MTHFRP42898 SNRPGP10-201ENST00000432323 225 ntBASIC1.27□□□□□ -2.21
MTHFRP42898 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.27□□□□□ -2.21
MTHFRP42898 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
MTHFRP42898 MIR5688-201ENST00000580619 83 ntBASIC1.27□□□□□ -2.21
MTHFRP42898 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
MTHFRP42898 GHRLOS.1-201ENST00000610995 70 ntBASIC1.27□□□□□ -2.21
MTHFRP42898 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
MTHFRP42898 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
MTHFRP42898 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 RNU6-1084P-201ENST00000362498 107 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 Y_RNA.83-201ENST00000363005 113 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 Y_RNA.308-201ENST00000365043 101 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 SNORA8.3-201ENST00000384679 139 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 RNU6-907P-201ENST00000390924 102 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 RNU6-131P-201ENST00000391144 107 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 RNU6-947P-201ENST00000516264 106 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 RNU6-453P-201ENST00000516819 85 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 MIR4724-201ENST00000579485 89 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 PVT1_3.1-201ENST00000620853 95 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
MTHFRP42898 AL442644.1-201ENST00000454390 3105 ntBASIC1.26□□□□□ -2.21
MTHFRP42898 MIR367-201ENST00000362299 68 ntBASIC1.25□□□□□ -2.21
MTHFRP42898 RNU6-923P-201ENST00000364753 107 ntBASIC1.25□□□□□ -2.21
MTHFRP42898 Y_RNA.297-201ENST00000364950 91 ntBASIC1.25□□□□□ -2.21
MTHFRP42898 RNU4-17P-201ENST00000365598 141 ntBASIC1.25□□□□□ -2.21
MTHFRP42898 RNU6-342P-201ENST00000384521 104 ntBASIC1.25□□□□□ -2.21
MTHFRP42898 MIR598-201ENST00000384868 97 ntBASIC1.25□□□□□ -2.21
MTHFRP42898 RNU6-493P-201ENST00000391321 108 ntBASIC1.25□□□□□ -2.21
MTHFRP42898 MIR548J-201ENST00000408833 112 ntBASIC1.25□□□□□ -2.21
MTHFRP42898 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
MTHFRP42898 SNORD45.4-201ENST00000516629 73 ntBASIC1.25□□□□□ -2.21
MTHFRP42898 RPL23AP91-201ENST00000569211 455 ntBASIC1.25□□□□□ -2.21
MTHFRP42898 Y_RNA.435-201ENST00000384095 112 ntBASIC1.24□□□□□ -2.21
MTHFRP42898 Y_RNA.785-201ENST00000384290 109 ntBASIC1.24□□□□□ -2.21
MTHFRP42898 MIR452-201ENST00000385020 85 ntBASIC1.24□□□□□ -2.21
MTHFRP42898 MIR516B2-201ENST00000385190 85 ntBASIC1.24□□□□□ -2.21
MTHFRP42898 MT-TT-201ENST00000387460 66 ntBASIC1.24□□□□□ -2.21
MTHFRP42898 AC245047.8-201ENST00000456455 284 ntBASIC1.24□□□□□ -2.21
MTHFRP42898 Z83818.1-201ENST00000603584 150 ntBASIC1.24□□□□□ -2.21
MTHFRP42898 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.23□□□□□ -2.21
MTHFRP42898 SNORD50B-201ENST00000364995 70 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 MIR616-201ENST00000385293 97 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 RNA5SP496-201ENST00000391240 109 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 RNU2-64P-201ENST00000411315 191 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms