Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 SNORD116-21-201ENST00000384507 92 ntBASIC2.43□□□□□ -2.02
CCNFP41002 RNA5SP212-201ENST00000391223 107 ntBASIC2.43□□□□□ -2.02
CCNFP41002 RNA5SP100-201ENST00000410903 110 ntBASIC2.43□□□□□ -2.02
CCNFP41002 RNA5SP59-201ENST00000410922 110 ntBASIC2.43□□□□□ -2.02
CCNFP41002 UBL5P3-201ENST00000475112 231 ntBASIC2.43□□□□□ -2.02
CCNFP41002 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.43□□□□□ -2.02
CCNFP41002 AC121758.2-201ENST00000553271 193 ntBASIC2.43□□□□□ -2.02
CCNFP41002 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.43□□□□□ -2.02
CCNFP41002 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.43□□□□□ -2.02
CCNFP41002 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
CCNFP41002 MIR1267-201ENST00000408723 78 ntBASIC2.42□□□□□ -2.02
CCNFP41002 RNA5SP508-201ENST00000411327 119 ntBASIC2.42□□□□□ -2.02
CCNFP41002 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.42□□□□□ -2.02
CCNFP41002 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.42□□□□□ -2.02
CCNFP41002 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.42□□□□□ -2.02
CCNFP41002 RNU7-80P-201ENST00000459562 61 ntBASIC2.42□□□□□ -2.02
CCNFP41002 RNA5SP320-201ENST00000516263 124 ntBASIC2.42□□□□□ -2.02
CCNFP41002 AC002984.1-201ENST00000591692 448 ntBASIC2.42□□□□□ -2.02
CCNFP41002 SNORD3E-202ENST00000627253 216 ntBASIC2.42□□□□□ -2.02
CCNFP41002 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CCNFP41002 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCNFP41002 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.42□□□□□ -2.02
CCNFP41002 SNORA27-201ENST00000384323 126 ntBASIC2.41□□□□□ -2.02
CCNFP41002 MIR144-201ENST00000384886 86 ntBASIC2.41□□□□□ -2.02
CCNFP41002 MIR452-201ENST00000385020 85 ntBASIC2.41□□□□□ -2.02
CCNFP41002 RNY4P18-201ENST00000391107 89 ntBASIC2.41□□□□□ -2.02
CCNFP41002 U8.17-201ENST00000391292 132 ntBASIC2.41□□□□□ -2.02
CCNFP41002 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.41□□□□□ -2.02
CCNFP41002 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.41□□□□□ -2.02
CCNFP41002 RNA5SP148-201ENST00000516527 94 ntBASIC2.41□□□□□ -2.02
CCNFP41002 Y_RNA.709-201ENST00000516952 92 ntBASIC2.41□□□□□ -2.02
CCNFP41002 SNORA31.17-201ENST00000516953 127 ntBASIC2.41□□□□□ -2.02
CCNFP41002 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCNFP41002 RNA5SP276-201ENST00000362580 94 ntBASIC2.4□□□□□ -2.03
CCNFP41002 RNU4-16P-201ENST00000364737 141 ntBASIC2.4□□□□□ -2.03
CCNFP41002 RNY1P6-201ENST00000384193 109 ntBASIC2.4□□□□□ -2.03
CCNFP41002 AL359511.1-201ENST00000402970 211 ntBASIC2.4□□□□□ -2.03
CCNFP41002 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.4□□□□□ -2.03
CCNFP41002 PGBD4P5-201ENST00000445958 426 ntBASIC2.4□□□□□ -2.03
CCNFP41002 RNU6-237P-201ENST00000515985 71 ntBASIC2.4□□□□□ -2.03
CCNFP41002 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.4□□□□□ -2.03
CCNFP41002 AC021443.1-201ENST00000604478 211 ntBASIC2.4□□□□□ -2.03
CCNFP41002 AC091932.4-201ENST00000623386 200 ntBASIC2.4□□□□□ -2.03
CCNFP41002 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.4□□□□□ -2.03
CCNFP41002 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
CCNFP41002 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CCNFP41002 MIR302B-201ENST00000362188 73 ntBASIC2.39□□□□□ -2.03
CCNFP41002 Y_RNA.35-201ENST00000362601 101 ntBASIC2.39□□□□□ -2.03
CCNFP41002 Y_RNA.454-201ENST00000384224 113 ntBASIC2.39□□□□□ -2.03
CCNFP41002 Y_RNA.494-201ENST00000384432 111 ntBASIC2.39□□□□□ -2.03
CCNFP41002 MIR136-201ENST00000385207 82 ntBASIC2.39□□□□□ -2.03
CCNFP41002 MIRLET7F2-201ENST00000385277 83 ntBASIC2.39□□□□□ -2.03
CCNFP41002 AL627390.1-201ENST00000396055 340 ntBASIC2.39□□□□□ -2.03
CCNFP41002 MIR1261-201ENST00000408659 82 ntBASIC2.39□□□□□ -2.03
CCNFP41002 RPS26P48-201ENST00000491713 339 ntBASIC2.39□□□□□ -2.03
CCNFP41002 PDCD5P2-201ENST00000507570 312 ntBASIC2.39□□□□□ -2.03
CCNFP41002 AC090821.2-201ENST00000523552 176 ntBASIC2.39□□□□□ -2.03
CCNFP41002 HSPE1P19-201ENST00000603327 295 ntBASIC2.39□□□□□ -2.03
CCNFP41002 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.38□□□□□ -2.03
CCNFP41002 SNORA16B-201ENST00000364674 135 ntBASIC2.38□□□□□ -2.03
CCNFP41002 MIR660-201ENST00000385235 97 ntBASIC2.38□□□□□ -2.03
CCNFP41002 RNA5SP136-201ENST00000410906 107 ntBASIC2.38□□□□□ -2.03
CCNFP41002 RNU6-830P-201ENST00000516353 107 ntBASIC2.38□□□□□ -2.03
CCNFP41002 RNA5SP24-201ENST00000516478 95 ntBASIC2.38□□□□□ -2.03
CCNFP41002 AL513423.1-201ENST00000621695 132 ntBASIC2.38□□□□□ -2.03
CCNFP41002 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.38□□□□□ -2.03
CCNFP41002 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCNFP41002 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
CCNFP41002 RNU6-349P-201ENST00000362402 107 ntBASIC2.37□□□□□ -2.03
CCNFP41002 RNU6-153P-201ENST00000364422 104 ntBASIC2.37□□□□□ -2.03
CCNFP41002 SNORD114-30-201ENST00000364448 72 ntBASIC2.37□□□□□ -2.03
CCNFP41002 RNU6-360P-201ENST00000390944 104 ntBASIC2.37□□□□□ -2.03
CCNFP41002 AC107297.1-201ENST00000459991 176 ntBASIC2.37□□□□□ -2.03
CCNFP41002 AC099513.1-201ENST00000490423 301 ntBASIC2.37□□□□□ -2.03
CCNFP41002 RNU6-589P-201ENST00000516485 107 ntBASIC2.37□□□□□ -2.03
CCNFP41002 RNY4P20-201ENST00000516678 93 ntBASIC2.37□□□□□ -2.03
CCNFP41002 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.37□□□□□ -2.03
CCNFP41002 MIR1291-201ENST00000627649 87 ntBASIC2.37□□□□□ -2.03
CCNFP41002 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCNFP41002 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCNFP41002 SNORA70B-201ENST00000384210 135 ntBASIC2.36□□□□□ -2.03
CCNFP41002 AC079804.2-201ENST00000490376 200 ntBASIC2.36□□□□□ -2.03
CCNFP41002 SUMO2P16-201ENST00000519475 264 ntBASIC2.36□□□□□ -2.03
CCNFP41002 AL773524.1-201ENST00000614065 229 ntBASIC2.36□□□□□ -2.03
CCNFP41002 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-34-201ENST00000362441 82 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-12-201ENST00000362583 82 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-29-201ENST00000362834 82 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-9-201ENST00000362912 82 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-21-201ENST00000362963 81 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-14-201ENST00000363090 81 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-13-201ENST00000363358 82 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-41-201ENST00000363608 82 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-11-201ENST00000363616 82 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-5-201ENST00000363633 82 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-39-201ENST00000363694 82 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-4-201ENST00000363810 82 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-16-201ENST00000363887 82 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-6-201ENST00000363942 82 ntBASIC2.35□□□□□ -2.03
CCNFP41002 SNORD115-42-201ENST00000364273 82 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms