Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 RNU6-674P-201ENST00000363831 107 ntBASIC0□□□□□ -2.41
COL18A1P39060 RNY3P5-201ENST00000384127 102 ntBASIC0□□□□□ -2.41
COL18A1P39060 AC073261.1-201ENST00000429409 121 ntBASIC0□□□□□ -2.41
COL18A1P39060 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0□□□□□ -2.41
COL18A1P39060 MIR5690-201ENST00000583739 73 ntBASIC0□□□□□ -2.41
COL18A1P39060 AL080274.1-201ENST00000605565 220 ntBASIC0□□□□□ -2.41
COL18A1P39060 uc_338.6-201ENST00000613544 171 ntBASIC0□□□□□ -2.41
COL18A1P39060 RNU6-302P-201ENST00000365249 107 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 RNU6V-201ENST00000384105 107 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 RNU2-59P-201ENST00000410482 191 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 RNU7-62P-201ENST00000458856 62 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 RNA5SP227-201ENST00000516184 113 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 RN7SKP295-201ENST00000517264 153 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 MIR3678-201ENST00000578455 94 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 AC002553.4-201ENST00000616896 331 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 AC048344.4-201ENST00000619744 527 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 RNU6-815P-201ENST00000384080 113 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 AC236972.2-201ENST00000434979 310 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 RNU7-169P-201ENST00000459456 61 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 RNA5SP94-201ENST00000516917 108 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 RNU7-156P-201ENST00000517214 74 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 AC112693.2-201ENST00000556538 232 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 RPL23AP91-201ENST00000569211 455 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 TPTEP1-208ENST00000636884 213 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 MIR198-201ENST00000637333 62 ntBASIC-0.01□□□□□ -2.41
COL18A1P39060 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.01□□□□□ -2.41
COL18A1P39060 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.02□□□□□ -2.41
COL18A1P39060 SNORD114-9-201ENST00000364370 72 ntBASIC-0.02□□□□□ -2.41
COL18A1P39060 RNU6-958P-201ENST00000516995 106 ntBASIC-0.02□□□□□ -2.41
COL18A1P39060 AC127455.1-201ENST00000565496 145 ntBASIC-0.02□□□□□ -2.41
COL18A1P39060 MIR8055-201ENST00000610739 97 ntBASIC-0.02□□□□□ -2.41
COL18A1P39060 MIR3688-2-201ENST00000636963 87 ntBASIC-0.02□□□□□ -2.41
COL18A1P39060 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.03□□□□□ -2.41
COL18A1P39060 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.03□□□□□ -2.41
COL18A1P39060 SNORD115-41-201ENST00000363608 82 ntBASIC-0.03□□□□□ -2.41
COL18A1P39060 SNORD114-28-201ENST00000363610 72 ntBASIC-0.03□□□□□ -2.41
COL18A1P39060 RNU4-24P-201ENST00000364565 139 ntBASIC-0.03□□□□□ -2.41
COL18A1P39060 MIR635-201ENST00000384830 98 ntBASIC-0.03□□□□□ -2.41
COL18A1P39060 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.03□□□□□ -2.41
COL18A1P39060 RNU7-102P-201ENST00000458948 62 ntBASIC-0.03□□□□□ -2.41
COL18A1P39060 RNU6-437P-201ENST00000459408 95 ntBASIC-0.03□□□□□ -2.41
COL18A1P39060 AC091951.2-201ENST00000500762 203 ntBASIC-0.03□□□□□ -2.41
COL18A1P39060 RNU6-448P-201ENST00000517052 107 ntBASIC-0.03□□□□□ -2.41
COL18A1P39060 MIR4431-201ENST00000579990 94 ntBASIC-0.03□□□□□ -2.41
COL18A1P39060 SNORD92-201ENST00000585078 85 ntBASIC-0.03□□□□□ -2.41
COL18A1P39060 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.03□□□□□ -2.41
COL18A1P39060 SNORA24-201ENST00000384096 131 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 RNU6-514P-201ENST00000384208 107 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 SNORA8.2-201ENST00000384372 139 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 MIR224-201ENST00000384889 81 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 SNORA75.6-201ENST00000391318 127 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 SNORA36B-201ENST00000410438 131 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 RNA5SP451-201ENST00000410588 110 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
COL18A1P39060 AC022306.2-201ENST00000617563 647 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 MIR548AY-201ENST00000617669 107 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 AC134878.1-201ENST00000619901 243 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 SNORA72.1-201ENST00000363485 129 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 RNU4-75P-201ENST00000364621 146 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 AC015818.7-201ENST00000428754 109 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 AC087499.7-201ENST00000441958 109 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 RNU7-185P-201ENST00000459215 60 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 AC074198.2-201ENST00000508153 258 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 RNU7-30P-201ENST00000516835 62 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 AC090517.2-201ENST00000614966 680 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 AC011476.5-201ENST00000615594 130 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL18A1P39060 AL669831.3-213ENST00000636676 183 ntBASIC-0.04□□□□□ -2.42
COL18A1P39060 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 SNORA32.3-201ENST00000384772 121 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 MT-TQ-201ENST00000387372 72 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 SNORA40.5-201ENST00000391061 128 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 AL603910.2-201ENST00000407268 136 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 AF228730.4-201ENST00000421457 183 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 Z83846.1-201ENST00000446798 265 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 RPL30P15-201ENST00000457129 321 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 RNU6-720P-201ENST00000516363 108 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 RNU6-966P-201ENST00000516479 104 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL18A1P39060 SNORA25.18-201ENST00000607153 114 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 U2.1-201ENST00000618978 145 ntBASIC-0.05□□□□□ -2.42
COL18A1P39060 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.05□□□□□ -2.42
COL18A1P39060 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD72-201ENST00000390994 80 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 AC090844.1-201ENST00000422019 156 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SEPT7P4-201ENST00000437076 306 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 RNU7-73P-201ENST00000458743 63 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 RNA5SP268-201ENST00000516828 124 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-34-201ENST00000362441 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-12-201ENST00000362583 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-29-201ENST00000362834 82 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms