Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 RNU6-693P-201ENST00000516134 107 ntBASIC1.46□□□□□ -2.18
RPL3P39023 AC015726.2-201ENST00000620112 122 ntBASIC1.46□□□□□ -2.18
RPL3P39023 MIR3658-201ENST00000636291 56 ntBASIC1.46□□□□□ -2.18
RPL3P39023 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.46□□□□□ -2.18
RPL3P39023 RNU6-818P-201ENST00000364837 108 ntBASIC1.45□□□□□ -2.18
RPL3P39023 RNU6-1130P-201ENST00000365434 107 ntBASIC1.45□□□□□ -2.18
RPL3P39023 RNU6-1336P-201ENST00000383886 109 ntBASIC1.45□□□□□ -2.18
RPL3P39023 SNORD41-201ENST00000386967 70 ntBASIC1.45□□□□□ -2.18
RPL3P39023 RNU6-239P-201ENST00000390990 99 ntBASIC1.45□□□□□ -2.18
RPL3P39023 AC107027.2-201ENST00000512197 115 ntBASIC1.45□□□□□ -2.18
RPL3P39023 RNU6-504P-201ENST00000516568 104 ntBASIC1.45□□□□□ -2.18
RPL3P39023 RNU7-121P-201ENST00000516604 62 ntBASIC1.45□□□□□ -2.18
RPL3P39023 MIR3198-2-201ENST00000577868 80 ntBASIC1.45□□□□□ -2.18
RPL3P39023 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
RPL3P39023 FAM106DP-201ENST00000586416 501 ntBASIC1.45□□□□□ -2.18
RPL3P39023 AC021753.1-201ENST00000635724 168 ntBASIC1.45□□□□□ -2.18
RPL3P39023 SNORA2.2-201ENST00000365473 135 ntBASIC1.44□□□□□ -2.18
RPL3P39023 Y_RNA.357-201ENST00000365487 109 ntBASIC1.44□□□□□ -2.18
RPL3P39023 SNORD38C-201ENST00000384381 69 ntBASIC1.44□□□□□ -2.18
RPL3P39023 MIR504-201ENST00000385065 83 ntBASIC1.44□□□□□ -2.18
RPL3P39023 MIR136-201ENST00000385207 82 ntBASIC1.44□□□□□ -2.18
RPL3P39023 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
RPL3P39023 RNU6-938P-201ENST00000411285 103 ntBASIC1.44□□□□□ -2.18
RPL3P39023 CYCSP49-201ENST00000420810 319 ntBASIC1.44□□□□□ -2.18
RPL3P39023 AF228730.3-201ENST00000436691 102 ntBASIC1.44□□□□□ -2.18
RPL3P39023 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.44□□□□□ -2.18
RPL3P39023 AC008834.1-201ENST00000511612 175 ntBASIC1.44□□□□□ -2.18
RPL3P39023 RNU6-830P-201ENST00000516353 107 ntBASIC1.44□□□□□ -2.18
RPL3P39023 SNORD116-25-201ENST00000516517 92 ntBASIC1.44□□□□□ -2.18
RPL3P39023 RNU6-255P-201ENST00000516957 105 ntBASIC1.44□□□□□ -2.18
RPL3P39023 RNU6-1212P-201ENST00000517023 104 ntBASIC1.44□□□□□ -2.18
RPL3P39023 SNORA44.1-201ENST00000517031 108 ntBASIC1.44□□□□□ -2.18
RPL3P39023 MTND5P41-201ENST00000517498 206 ntBASIC1.44□□□□□ -2.18
RPL3P39023 AC019176.1-201ENST00000518519 225 ntBASIC1.44□□□□□ -2.18
RPL3P39023 MIR3144-201ENST00000579460 79 ntBASIC1.44□□□□□ -2.18
RPL3P39023 MIR376A2-201ENST00000636782 80 ntBASIC1.44□□□□□ -2.18
RPL3P39023 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.44□□□□□ -2.18
RPL3P39023 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RPL3P39023 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
RPL3P39023 Y_RNA.8-201ENST00000362353 102 ntBASIC1.43□□□□□ -2.18
RPL3P39023 Y_RNA.398-201ENST00000383952 99 ntBASIC1.43□□□□□ -2.18
RPL3P39023 Y_RNA.464-201ENST00000384282 110 ntBASIC1.43□□□□□ -2.18
RPL3P39023 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
RPL3P39023 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
RPL3P39023 AC090049.2-201ENST00000550377 109 ntBASIC1.43□□□□□ -2.18
RPL3P39023 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.43□□□□□ -2.18
RPL3P39023 RNY1P11-201ENST00000363759 113 ntBASIC1.42□□□□□ -2.18
RPL3P39023 SNORD115-28-201ENST00000363931 81 ntBASIC1.42□□□□□ -2.18
RPL3P39023 RNU6-1082P-201ENST00000364574 107 ntBASIC1.42□□□□□ -2.18
RPL3P39023 SNORD28B-201ENST00000390993 75 ntBASIC1.42□□□□□ -2.18
RPL3P39023 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.42□□□□□ -2.18
RPL3P39023 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.42□□□□□ -2.18
RPL3P39023 RNU6-922P-201ENST00000516753 99 ntBASIC1.42□□□□□ -2.18
RPL3P39023 SNORA18.7-201ENST00000516910 131 ntBASIC1.42□□□□□ -2.18
RPL3P39023 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
RPL3P39023 RNU7-181P-201ENST00000517234 74 ntBASIC1.42□□□□□ -2.18
RPL3P39023 MIR3129-201ENST00000581095 76 ntBASIC1.42□□□□□ -2.18
RPL3P39023 AL365205.2-201ENST00000594586 68 ntBASIC1.42□□□□□ -2.18
RPL3P39023 Y_RNA.37-201ENST00000362606 108 ntBASIC1.41□□□□□ -2.18
RPL3P39023 Y_RNA.170-201ENST00000363746 110 ntBASIC1.41□□□□□ -2.18
RPL3P39023 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
RPL3P39023 Y_RNA.337-201ENST00000365312 102 ntBASIC1.41□□□□□ -2.18
RPL3P39023 RNU6-597P-201ENST00000365620 102 ntBASIC1.41□□□□□ -2.18
RPL3P39023 Y_RNA.393-201ENST00000383936 102 ntBASIC1.41□□□□□ -2.18
RPL3P39023 SNORD116-18-201ENST00000383961 92 ntBASIC1.41□□□□□ -2.18
RPL3P39023 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RPL3P39023 Y_RNA.580-201ENST00000391004 95 ntBASIC1.41□□□□□ -2.18
RPL3P39023 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
RPL3P39023 SNORD77.3-201ENST00000391113 65 ntBASIC1.41□□□□□ -2.18
RPL3P39023 U8.17-201ENST00000391292 132 ntBASIC1.41□□□□□ -2.18
RPL3P39023 MIR934-201ENST00000401241 83 ntBASIC1.41□□□□□ -2.18
RPL3P39023 RPS27P16-201ENST00000425758 201 ntBASIC1.41□□□□□ -2.18
RPL3P39023 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL3P39023 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL3P39023 AC027119.1-201ENST00000440877 241 ntBASIC1.41□□□□□ -2.18
RPL3P39023 SNORD123-201ENST00000459473 70 ntBASIC1.41□□□□□ -2.18
RPL3P39023 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.41□□□□□ -2.18
RPL3P39023 Y_RNA.494-201ENST00000384432 111 ntBASIC1.4□□□□□ -2.19
RPL3P39023 Y_RNA.521-201ENST00000384560 114 ntBASIC1.4□□□□□ -2.19
RPL3P39023 AC079140.2-201ENST00000506193 142 ntBASIC1.4□□□□□ -2.19
RPL3P39023 SNORD36C-201ENST00000516733 66 ntBASIC1.4□□□□□ -2.19
RPL3P39023 SNORA74.3-201ENST00000517108 154 ntBASIC1.4□□□□□ -2.19
RPL3P39023 MIR548AR-201ENST00000582191 57 ntBASIC1.4□□□□□ -2.19
RPL3P39023 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL3P39023 DNAJC19P2-201ENST00000593340 302 ntBASIC1.4□□□□□ -2.19
RPL3P39023 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RPL3P39023 SNORA67.5-201ENST00000391036 107 ntBASIC1.39□□□□□ -2.19
RPL3P39023 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL3P39023 MIR4285-201ENST00000581001 85 ntBASIC1.39□□□□□ -2.19
RPL3P39023 AL513534.2-201ENST00000603836 250 ntBASIC1.39□□□□□ -2.19
RPL3P39023 U8.1-201ENST00000362843 134 ntBASIC1.38□□□□□ -2.19
RPL3P39023 RNA5SP190-201ENST00000365222 118 ntBASIC1.38□□□□□ -2.19
RPL3P39023 Y_RNA.542-201ENST00000384641 111 ntBASIC1.38□□□□□ -2.19
RPL3P39023 AL451046.2-201ENST00000403074 277 ntBASIC1.38□□□□□ -2.19
RPL3P39023 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.38□□□□□ -2.19
RPL3P39023 AC134878.1-201ENST00000619901 243 ntBASIC1.38□□□□□ -2.19
RPL3P39023 RNU6-151P-201ENST00000364158 107 ntBASIC1.37□□□□□ -2.19
RPL3P39023 RNU4-11P-201ENST00000365287 132 ntBASIC1.37□□□□□ -2.19
RPL3P39023 RNU6-1062P-201ENST00000383908 107 ntBASIC1.37□□□□□ -2.19
RPL3P39023 RNU6-449P-201ENST00000383914 107 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms